Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0124000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:1394429:1400133:1 gene:Os03g0124000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-related domain containing protein. (Os03t0124000-01)
Sequence	ATGGCGCATGATCCGAACCTGGGGTTCGCGGATTACTTCTCGGCGGCAGATGCATCGGCG TCGTCGGTCACGACGCTGATGCCGGCGATGGACGAAGCGGCGCCGGAGCTGTTCGGGTTG CAGGCCGGGATGGAGCTTCTCGGCGTGCGCGGTCTGGGTATGAGTATGATGCCCGGCGCG GCAGGCAAGGTCGCCGCGCTGGTGGCCGACGCTGGGGACGACGGCGGCGGCGGCTCCACC ATGCGCTTCCTCAGCGAGCAGCACCAACAGCCGAGCCAGGCGCCGCTGTCGCTGTCGCTG TGCCGCCCGGACGGCGTGCTGCACCTCGGCGGCGCGGCGCGGCCGCAGCACCAACTGGCG CCCGCGGCGCCATGGATGACGCACCACGACGCGTCGTCGTCGGCGCCGCAAGTGCACGGC GCGTGGCACCTGCGCAGCTCGAGGTTCCTCCTCCCGACGCAGCAGCTCCTCCAAGAATTC TGCAGCCTCCCCGTGGACAGCACCAAGCGCGGCAACGGCGCCAAGGCAGCGACGCAGCAA GAAGACGGCCGCGGCGACGGGTCGTCGTCGTCGTCGGCCTCGTGGACCCCGTCGCCGCAG ATCCAGGCCATGGAAGCCCTGGAGCTGCAGAGGCTCAAGGACAAGCTCTACATCATGCTC GAAGAGGTGGACAGGAGGTACAGGAGGTACTGCGAGCAGATGAGGGCGGTGGCCGGGGGG TTCGAGGCGGTGGCCGGGGAGAGGGCGGCGGGGGCGTACACGGCGGTGGCGGCGAGGACG ATATCGAGGCACTTCCGGAGCCTGAGGGATGGGATCGTGGCGCAGCTGCAGGCGGCGAGG AAGGCGCTCGGGGAGAAGGACGTGAGCGCGGCCGGGACGACGCGGGGGCAGACGCCGCGG CTCAGGGTGATCGACCAGTGCATCAGGCACCACAAGTCGCTGCAGGGCGTCGCCGCCATG GACAGCCACCCGTGGCGCCCCCAGCGCGGCCTTCCCGACCGCGCCGTCACCATCCTCCGT GCCTGGCTCTTCGAGCACTTCCTGCACCCGTATCCAAGCGACGTGGATAAGCACATCCTG GCTCGACAGACGGGCCTCTCACGTAGCCAGGTGTCCAACTGGTTCATCAATGCGAGGGTT CGGCTGTGGAAGCCAATGGTGGAGGAGATGTACGTCGAGGAGATGAAGGGCCAGGACGGC GGCGACGGCAGCGGTGGACAGGGGAGCCTAAACCCTAAGCCTACCTGCAGCCACGCCTCC GAGGCGCGCGGCGGCCAGCAGCTGGTCGTCGGCGATGGCGACGGCGGCGAACAGAAGCCG ACGAGGGCGCAGCTTCGCCACGACGCCGGGTCGCTGGCCTCCGTCGTCAACGTCGACGTC GCGGCCGGCGCGGGCGGCGTGGCCCGGCTGCACCAGGCGGAGAACTTCGGCATCATGGAC CACCTCGACTTCGACGCGTACGACGACAGCCACCACCAGCAGCAGCACGGCGGGTTCGGC GGCGTGTCGCTGACGCTCGGGCTGCAGCAGCACGGCTCCCACGGCGGTGGCGGCGTGAAC ATCGCGTTCGGGGCGCCGGGGTCCGCGCACGGCGGCGCCGGGTTCTTGTACCCGGGCGAG CAGATGGCGCCTGACGCCATGCATCCGGGGCACGGCCACCACGTCGTCGGCGGACAGTTC GGCGTGGCCATGGACGGCGACGCCGCCTCGCACGCGCAAGAGCGGTACCGGAGCCTAAGC GCCGGCTTCCACCTGCTCCGCGACTTGGCCGGATGA

Peptide Sequence

PEP ID	Os03t0124000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:1394429:1400133:1 gene:Os03g0124000 transcript:Os03t0124000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-related domain containing protein. (Os03t0124000-01)
Sequence	MAHDPNLGFADYFSAADASASSVTTLMPAMDEAAPELFGLQAGMELLGVRGLGMSMMPGA AGKVAALVADAGDDGGGGSTMRFLSEQHQQPSQAPLSLSLCRPDGVLHLGGAARPQHQLA PAAPWMTHHDASSSAPQVHGAWHLRSSRFLLPTQQLLQEFCSLPVDSTKRGNGAKAATQQ EDGRGDGSSSSSASWTPSPQIQAMEALELQRLKDKLYIMLEEVDRRYRRYCEQMRAVAGG FEAVAGERAAGAYTAVAARTISRHFRSLRDGIVAQLQAARKALGEKDVSAAGTTRGQTPR LRVIDQCIRHHKSLQGVAAMDSHPWRPQRGLPDRAVTILRAWLFEHFLHPYPSDVDKHIL ARQTGLSRSQVSNWFINARVRLWKPMVEEMYVEEMKGQDGGDGSGGQGSLNPKPTCSHAS EARGGQQLVVGDGDGGEQKPTRAQLRHDAGSLASVVNVDVAAGAGGVARLHQAENFGIMD HLDFDAYDDSHHQQQHGGFGGVSLTLGLQQHGSHGGGGVNIAFGAPGSAHGGAGFLYPGE QMAPDAMHPGHGHHVVGGQFGVAMDGDAASHAQERYRSLSAGFHLLRDLAG

Transcript Sequence

Transcript ID	Os03t0124000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1394429:1400133:1 gene:Os03g0124000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-related domain containing protein. (Os03t0124000-01)
Sequence	CATCTTGTTTTCCTTCTTTTCCCTGCCCTCCCAGGACAAAGCAAGATTCCTGTGTTTCTG AGGCTTAGCTGAGGAAGGATTCGGCCTACCTGCTCTCTTCTCCTGCCCGGCCGATTGCTA CGACTTGCAACACGCATCACCATAGTAATAGTATCGTCGTGTTCACTCTCCGACGACTTA ATTGTGTGCGTGTTGTATTTCCCACCGTCTTGTCACTTCATCACACATCTGGCTACATCG ATGGATCACTGGTGCTACTAGCTAGCTAGCTCGCTAGTTACTCGATTACTGGCTGAATTT TCGCTTCTGTCTCCATCTATTTTACACAAATTAAAGCTTTTGGCGATCGGAGGAATTGAA ACACCGATATGGCGCATGATCCGAACCTGGGGTTCGCGGATTACTTCTCGGCGGCAGATG CATCGGCGTCGTCGGTCACGACGCTGATGCCGGCGATGGACGAAGCGGCGCCGGAGCTGT TCGGGTTGCAGGCCGGGATGGAGCTTCTCGGCGTGCGCGGTCTGGGTATGAGTATGATGC CCGGCGCGGCAGGCAAGGTCGCCGCGCTGGTGGCCGACGCTGGGGACGACGGCGGCGGCG GCTCCACCATGCGCTTCCTCAGCGAGCAGCACCAACAGCCGAGCCAGGCGCCGCTGTCGC TGTCGCTGTGCCGCCCGGACGGCGTGCTGCACCTCGGCGGCGCGGCGCGGCCGCAGCACC AACTGGCGCCCGCGGCGCCATGGATGACGCACCACGACGCGTCGTCGTCGGCGCCGCAAG TGCACGGCGCGTGGCACCTGCGCAGCTCGAGGTTCCTCCTCCCGACGCAGCAGCTCCTCC AAGAATTCTGCAGCCTCCCCGTGGACAGCACCAAGCGCGGCAACGGCGCCAAGGCAGCGA CGCAGCAAGAAGACGGCCGCGGCGACGGGTCGTCGTCGTCGTCGGCCTCGTGGACCCCGT CGCCGCAGATCCAGGCCATGGAAGCCCTGGAGCTGCAGAGGCTCAAGGACAAGCTCTACA TCATGCTCGAAGAGGTGGACAGGAGGTACAGGAGGTACTGCGAGCAGATGAGGGCGGTGG CCGGGGGGTTCGAGGCGGTGGCCGGGGAGAGGGCGGCGGGGGCGTACACGGCGGTGGCGG CGAGGACGATATCGAGGCACTTCCGGAGCCTGAGGGATGGGATCGTGGCGCAGCTGCAGG CGGCGAGGAAGGCGCTCGGGGAGAAGGACGTGAGCGCGGCCGGGACGACGCGGGGGCAGA CGCCGCGGCTCAGGGTGATCGACCAGTGCATCAGGCACCACAAGTCGCTGCAGGGCGTCG CCGCCATGGACAGCCACCCGTGGCGCCCCCAGCGCGGCCTTCCCGACCGCGCCGTCACCA TCCTCCGTGCCTGGCTCTTCGAGCACTTCCTGCACCCGTATCCAAGCGACGTGGATAAGC ACATCCTGGCTCGACAGACGGGCCTCTCACGTAGCCAGGTGTCCAACTGGTTCATCAATG CGAGGGTTCGGCTGTGGAAGCCAATGGTGGAGGAGATGTACGTCGAGGAGATGAAGGGCC AGGACGGCGGCGACGGCAGCGGTGGACAGGGGAGCCTAAACCCTAAGCCTACCTGCAGCC ACGCCTCCGAGGCGCGCGGCGGCCAGCAGCTGGTCGTCGGCGATGGCGACGGCGGCGAAC AGAAGCCGACGAGGGCGCAGCTTCGCCACGACGCCGGGTCGCTGGCCTCCGTCGTCAACG TCGACGTCGCGGCCGGCGCGGGCGGCGTGGCCCGGCTGCACCAGGCGGAGAACTTCGGCA TCATGGACCACCTCGACTTCGACGCGTACGACGACAGCCACCACCAGCAGCAGCACGGCG GGTTCGGCGGCGTGTCGCTGACGCTCGGGCTGCAGCAGCACGGCTCCCACGGCGGTGGCG GCGTGAACATCGCGTTCGGGGCGCCGGGGTCCGCGCACGGCGGCGCCGGGTTCTTGTACC CGGGCGAGCAGATGGCGCCTGACGCCATGCATCCGGGGCACGGCCACCACGTCGTCGGCG GACAGTTCGGCGTGGCCATGGACGGCGACGCCGCCTCGCACGCGCAAGAGCGGTACCGGA GCCTAAGCGCCGGCTTCCACCTGCTCCGCGACTTGGCCGGATGATCCATGCGGCGAACTA CTCAGTTCATCGCACGTACGCATATATATGCATTCCGTGTACTGTACTAGCAGACGATTT GGATGTCGCAGCGGCAGCGGCCGCGGCGGTGGCGACTAGGTAGGGATCCTCGCGCGCGGC CGGCGCTGCGGCGTGCATTGGTTGGGCAACCGAATTAAGCGTTTTTGTTGGTGGTGGTCC TTGATTTTACCGACCTATAGGTACAGTTCGTATATATCTCTCGCGATCGATCGTACACCA GCAGGGGAGTAGCCCAGTAGATCGTCGTCGATGGCGCTTTCGTGTGGTTCGGAAGCGGGC AGTTTATTTTAGCCTACCGGCCCGGCATCGGTTGCCGGGGGTTGTGTGGTCGTGTGTTGT GTAGTGGAGACAGCTTTTATTTGTACTGGAAATCTGGAATTTGATTGATGGTTC