Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0123800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:1355516:1358037:1 gene:Os03g0123800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydrolase. (Os03t0123800-01)
Sequence

ATGGTGGAGAAGACGAAGCTGCAGCTGCCGCTGGTGCACAACGAGCGGCTGTGGGCGCGG
CCGTGGCGGTGGGCCAAGACGGTGTTCTTCCTCGTCTCCATGCTCGCCTCGCTGCTGCTC
GTCTGCGCGCCGCCGCTGCTCATCGTCGTCCTCGACCTGCTACTCCCGCCCGCGCTCCTC
TCCAACTTCCACCGCGCCGCGAACCACCCCACCTCGCTCATCGACCAGGCCAGGGGCTTC
CACTTCCGGTCATCGCTCGTCGACCTCCCCGCCGTCTCCGCCGCGCGCTCCCTCCTCATC
CTCTGCGCGTACACGGCGTGCGGGGGAGGCGCGGCCTACCTGTGGGTGGCCGTGGCGTGC
AGCGTCGGCTCGGTGTGCTACGTCGTCGCCAAGGCGGCCGTGGTGTTCGGCGCGGCGCCC
GACAGGGCCGTGCTGGGGCTGCAGGGCAAGGGCCAGCTCGTCGCCGTGGAGGCCATGTTC
CTCATGTCGCTCGCGCTCGCCGCCGCGCACATCGCCATGGCCTACCGCGCCAGCTGCCGC
GAGCGACGCCGCCTGCTCGTCTACAGAATCGACGTCGAAGCTGTAAGGCTAAAGGGAGGC
CAAACGCCCAAGTCCCTGAAGCAGCAGTTCGCCGTATGA

Peptide Sequence

PEP ID

Os03t0123800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:1355516:1358037:1 gene:Os03g0123800 transcript:Os03t0123800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydrolase. (Os03t0123800-01)
Sequence

MVEKTKLQLPLVHNERLWARPWRWAKTVFFLVSMLASLLLVCAPPLLIVVLDLLLPPALL
SNFHRAANHPTSLIDQARGFHFRSSLVDLPAVSAARSLLILCAYTACGGGAAYLWVAVAC
SVGSVCYVVAKAAVVFGAAPDRAVLGLQGKGQLVAVEAMFLMSLALAAAHIAMAYRASCR
ERRRLLVYRIDVEAVRLKGGQTPKSLKQQFAV

Transcript Sequence

Transcript ID

Os03t0123800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1355516:1358037:1 gene:Os03g0123800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydrolase. (Os03t0123800-01)
Sequence

CTGGTATTCGCTATTCATCTCTGACCCTGCGGCGCACCAAAACCCCCGTTTCCGTCTCGC
GTTCTTCGATCGCCTCCGCTTAAAAAGCTCGCCGCCTCCGACCGAATCCACTCCCCCCCC
ATCAATCCCGCAACCCTACCGAAACCGGTAAACCACTGGAAGAAAGCGGGTTCGATCGAT
CGATCGATCTTGCTAGTGCGGCTATATCTGCTAGTAGGTGAATTGGTCGCTCGACGTTGG
TGATCATGGTGGAGAAGACGAAGCTGCAGCTGCCGCTGGTGCACAACGAGCGGCTGTGGG
CGCGGCCGTGGCGGTGGGCCAAGACGGTGTTCTTCCTCGTCTCCATGCTCGCCTCGCTGC
TGCTCGTCTGCGCGCCGCCGCTGCTCATCGTCGTCCTCGACCTGCTACTCCCGCCCGCGC
TCCTCTCCAACTTCCACCGCGCCGCGAACCACCCCACCTCGCTCATCGACCAGGCCAGGG
GCTTCCACTTCCGGTCATCGCTCGTCGACCTCCCCGCCGTCTCCGCCGCGCGCTCCCTCC
TCATCCTCTGCGCGTACACGGCGTGCGGGGGAGGCGCGGCCTACCTGTGGGTGGCCGTGG
CGTGCAGCGTCGGCTCGGTGTGCTACGTCGTCGCCAAGGCGGCCGTGGTGTTCGGCGCGG
CGCCCGACAGGGCCGTGCTGGGGCTGCAGGGCAAGGGCCAGCTCGTCGCCGTGGAGGCCA
TGTTCCTCATGTCGCTCGCGCTCGCCGCCGCGCACATCGCCATGGCCTACCGCGCCAGCT
GCCGCGAGCGACGCCGCCTGCTCGTCTACAGAATCGACGTCGAAGCTGTAAGGCTAAAGG
GAGGCCAAACGCCCAAGTCCCTGAAGCAGCAGTTCGCCGTATGACACTCGCTGCCTGGCC
GTTGCAGTCGGACACAAACTGAATGCCACGGCATGGCAGGGCCCTGCAGGGTTCGTTCCT
CCGGTCTCAATTTTTGGTTCAAGTAGATGTGTACAACACGACCGTTCACTGTACCTCAAG
TGAAAAATAGTGTAAAGAAGATGTAAATACGAAACATTTGTGCTTCGGCCTCCTGCAGTC
AATGCAAAAATAGGATGAGCCGTTCGGC