Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0123600-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:1346126:1349480:-1 gene:Os03g0123600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function Cys-rich family protein. (Os03t0123600-01);Protein of unknown function Cys-rich family protein. (Os03t0123600-02)
Sequence	ATGGCGTCGTCGCAGGCCAACCTCGACAAGATGCAGCTCCGCCAGAGCTACCGCAACCTC TGGCACTCCGATCTCACCAGCACCATCCAGGCCGACTTCCCATATTGCTGCCTCGCGCTC TGGTGTGGACCATGTGTGTCATACATGCTTCGCAAAAGGGCTCTGTATAATGACATGTCA AGATATGTCTGCTGTGCTGGGTACATGCCATGCAGTGGGAAGTGTGGTGAAAGCCGATGC CCAGAGTTCTGTCTTGCTACTGAGGTGTTTCTGTGCTTTGGTAATTCAGTTGCTTCAACC CGCTTCTTGCTCCAAGATGAATTCAACATACAGACAACTAAATGCGATAACTGCATCATT GGCTTCATGTTCTGCCTCCAACAAATTGCTTGTATCTTCTCTATAGTTGCCGCTATTGTT GGTAGTGAAGAGCTTTCAGAGGCTTCCCAAATCCTTTCCTGCTTGTCTGATATGGTCTAC TGCTCGGTTTGCGCCTGTATGCAGACCCAACACAAAATTGAAATGGACAAGAGAGATGGG AAGTTCGGCCCACAGCCCATGGCAGTGCCTCCAATGCAGCAAATGTCGCGCATCGATCAG CCTATTCCACCTCCTGTTGGGTACACACCACAACAGCCAGCATACGGTCAGCCTTATGGT GGCTATCCTCCTGCTCCGCCTGCTCAAGGTTATCCACCAGCTGCTTACCCTCCGGCAGGT TACCCCCAGGGTGGTGCATACCCTCCCCCTGGCTCTTATCCCCCACCTGGTTCCTACCCG CCTCAGGGCTCCTACCCTCCTCCACAAGGTTACTACGGCAAGTAA

Peptide Sequence

PEP ID	Os03t0123600-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:1346126:1349480:-1 gene:Os03g0123600 transcript:Os03t0123600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function Cys-rich family protein. (Os03t0123600-01);Protein of unknown function Cys-rich family protein. (Os03t0123600-02)
Sequence	MASSQANLDKMQLRQSYRNLWHSDLTSTIQADFPYCCLALWCGPCVSYMLRKRALYNDMS RYVCCAGYMPCSGKCGESRCPEFCLATEVFLCFGNSVASTRFLLQDEFNIQTTKCDNCII GFMFCLQQIACIFSIVAAIVGSEELSEASQILSCLSDMVYCSVCACMQTQHKIEMDKRDG KFGPQPMAVPPMQQMSRIDQPIPPPVGYTPQQPAYGQPYGGYPPAPPAQGYPPAAYPPAG YPQGGAYPPPGSYPPPGSYPPQGSYPPPQGYYGK

Transcript Sequence

Transcript ID	Os03t0123600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:1346126:1349480:-1 gene:Os03g0123600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function Cys-rich family protein. (Os03t0123600-01);Protein of unknown function Cys-rich family protein. (Os03t0123600-02)
Sequence	CCCCCCCCCCCCCCCCACATCTCCCGCAGAGTCCACGGCCGATCCATCCCCTCGTGCAGG CCGCCGGCGGCGGGGAGGAGGAGGAGGAGGCGATGGCGTCGTCGCAGGCCAACCTCGACA AGATGCAGCTCCGCCAGAGCTACCGCAACCTCTGGCACTCCGATCTCACCAGCACCATCC AGGCCGACTTCCCATATTGCTGCCTCGCGCTCTGGTGTGGACCATGTGTGTCATACATGC TTCGCAAAAGGGCTCTGTATAATGACATGTCAAGATATGTCTGCTGTGCTGGGTACATGC CATGCAGTGGGAAGTGTGGTGAAAGCCGATGCCCAGAGTTCTGTCTTGCTACTGAGGTGT TTCTGTGCTTTGGTAATTCAGTTGCTTCAACCCGCTTCTTGCTCCAAGATGAATTCAACA TACAGACAACTAAATGCGATAACTGCATCATTGGCTTCATGTTCTGCCTCCAACAAATTG CTTGTATCTTCTCTATAGTTGCCGCTATTGTTGGTAGTGAAGAGCTTTCAGAGGCTTCCC AAATCCTTTCCTGCTTGTCTGATATGGTCTACTGCTCGGTTTGCGCCTGTATGCAGACCC AACACAAAATTGAAATGGACAAGAGAGATGGGAAGTTCGGCCCACAGCCCATGGCAGTGC CTCCAATGCAGCAAATGTCGCGCATCGATCAGCCTATTCCACCTCCTGTTGGGTACACAC CACAACAGCCAGCATACGGTCAGCCTTATGGTGGCTATCCTCCTGCTCCGCCTGCTCAAG GTTATCCACCAGCTGCTTACCCTCCGGCAGGTTACCCCCAGGGTGGTGCATACCCTCCCC CTGGCTCTTATCCCCCACCTGGTTCCTACCCGCCTCAGGGCTCCTACCCTCCTCCACAAG GTTACTACGGCAAGTAAAGGAAATGCAGAAATTGGAGATATGTCTTTGTGACGAAATCGG TATATTGTGAACAATGTAAACATTAGGGTGGTTGTAGTGTTATTATAGGTGATGTCGATA TATTAATCGATCTGTGACTGGTCTGGGTGGTAAACTGCAAACATAATTTGGATTCCTCCG GGTGTGGTATACTGTGAACCCGTTTCGTAG