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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0122300-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:1242351:1244930:-1 gene:Os03g0122300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavonol synthase description:Similar to Flavanone 3-hydroxylase-like protein. (Os03t0122300-01);Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os03t0122300-02)
Sequence

ATGGCGGACCAGCTCATCTCCACGGCAGACCACGACACGCTGCCGGGCAACTACGTGCGC
CCCGAGGCGCAGCGCCCGCGCCTCGCCGACGTGCTCTCCGACGCCTCCATCCCCGTCGTC
GACCTCGCCAACCCCGACCGCGCCAAGCTCGTCTCCCAGGTCGGCGCCGCCTGCCGCTCC
CACGGCTTCTTCCAGGTGCTCAACCATGGGGTGCCAGTGGAGCTGACACTGTCGGTGCTG
GCGGTGGCGCACGACTTCTTCCGGCTGCCGGCGGAGGAGAAGGCCAAGCTCTACTCCGAC
GACCCGGCCAAGAAGATCCGCCTCTCCACCAGCTTCAACGTCCGCAAGGAGACCGTGCAC
AACTGGCGCGACTACCTCCGCCTCCACTGCTACCCGCTTCACCGCTACCTCCCTGATTGG
CCATCCAACCCCCCTTCCTTCAGTCCCAGGAAACAGTGCTGGTATCACAGGAAGACAGAA
TATCACAGCAACAAAGGTCTCTTTATTATAGAGTAG

Peptide Sequence

PEP ID

Os03t0122300-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:1242351:1244930:-1 gene:Os03g0122300 transcript:Os03t0122300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavonol synthase description:Similar to Flavanone 3-hydroxylase-like protein. (Os03t0122300-01);Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os03t0122300-02)
Sequence

MADQLISTADHDTLPGNYVRPEAQRPRLADVLSDASIPVVDLANPDRAKLVSQVGAACRS
HGFFQVLNHGVPVELTLSVLAVAHDFFRLPAEEKAKLYSDDPAKKIRLSTSFNVRKETVH
NWRDYLRLHCYPLHRYLPDWPSNPPSFSPRKQCWYHRKTEYHSNKGLFIIE

Transcript Sequence

Transcript ID

Os03t0122300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1242351:1244930:-1 gene:Os03g0122300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavonol synthase description:Similar to Flavanone 3-hydroxylase-like protein. (Os03t0122300-01);Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os03t0122300-02)
Sequence

GTGCCAAGTTGTGTGTGTGTACCGCGGCATGGCGGACCAGCTCATCTCCACGGCAGACCA
CGACACGCTGCCGGGCAACTACGTGCGCCCCGAGGCGCAGCGCCCGCGCCTCGCCGACGT
GCTCTCCGACGCCTCCATCCCCGTCGTCGACCTCGCCAACCCCGACCGCGCCAAGCTCGT
CTCCCAGGTCGGCGCCGCCTGCCGCTCCCACGGCTTCTTCCAGGTGCTCAACCATGGGGT
GCCAGTGGAGCTGACACTGTCGGTGCTGGCGGTGGCGCACGACTTCTTCCGGCTGCCGGC
GGAGGAGAAGGCCAAGCTCTACTCCGACGACCCGGCCAAGAAGATCCGCCTCTCCACCAG
CTTCAACGTCCGCAAGGAGACCGTGCACAACTGGCGCGACTACCTCCGCCTCCACTGCTA
CCCGCTTCACCGCTACCTCCCTGATTGGCCATCCAACCCCCCTTCCTTCAGTCCCAGGAA
ACAGTGCTGGTATCACAGGAAGACAGAATATCACAGCAACAAAGGTCTCTTTATTATAGA
GTAGAGGTACAGTCATGTTGGGCTGCGGACAGATCCCAAGCTCACAACTGCATTGCAAAA
AGGGAAACGGAAGCCAAGACTTGGACCAAACAACACAGGCGCGACTTGGGAATTAGGCCG
AAACCCTAAAACTCATCGTAGCCGGTTTGCTCCTGGAAGAACTCCTCGTCAGCGGGATCC
GCTTCATCTTCTTCAGCAACTGGGGGGGATTATTTATATAGAGCAAGGGTGAGTACGGGA
GTACTCAGCAAGCCATGGGAAATAAGTGTTTAATGCAGGCTTCAAGGAAAGGCTGTTGTT
TTTGCAATTGATTTTATTTGAACTCTTTTCTG