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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0122200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:1232247:1234438:-1 gene:Os03g0122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L11. (Os03t0122200-01)
Sequence

CCCGCCGTTCATCTCCTCGTCTCGCCCCGCTCCAAGCGCGCCGCCATGGCCACCACCTCC
TTGTCCCTGCATGGCGTCCCATCCCCCACCGCCACCAAGCTCTCCTCCTCCTTTCTCGGC
GCCCCCGCCTCCTTCCTCCGGCCGACGCCGCCGCCGCTCGCTGCCCCCTCGCGGAGGGCG
CTCGCCGTCAGGGCCATGGCGCCACCCAAGCCCGGGGGCAAGCCCAAGAAAGTGGTGGGC
CTCATAAAGCTGGCGCTGGAGGCCGGGAAGGCCACGCCGGCGCCGCCGGTCGGCCCCGCG
CTTGGTGCCAAGGGTGTGAACATCATGTCCTTCTGCAAGGAGTACAATGCCAAGACGGCC
GAGAAGGCCGGCTACATCATCCCTGTCGAGATCACCGTGTTCGATGATAAAAGTTTCACC
TTTATCTTGAAGACCCCTCCTGCCTCAGTCCTTCTCCTCAAGGCAGCAGGTATCGAGAAA
GGTTCAAAAGAACCGCAGCGAGAGAAGGTTGGAAAAGTAACAGCAGATCAAGTACGTACA
ATAGCTCAAGAGAAGTTGCCAGATTTGAACTGCAAGAGCATTGACTCGGCCATGAGAATT
ATAGCGGGCACTGCTGCTAATATGGGAATCGAGGTTGACCCTCCAATACTTGAGAAGAAG
GAAAAGGTGCTCTTGTAG

Peptide Sequence

PEP ID

Os03t0122200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:1232247:1234438:-1 gene:Os03g0122200 transcript:Os03t0122200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L11. (Os03t0122200-01)
Sequence

PAVHLLVSPRSKRAAMATTSLSLHGVPSPTATKLSSSFLGAPASFLRPTPPPLAAPSRRA
LAVRAMAPPKPGGKPKKVVGLIKLALEAGKATPAPPVGPALGAKGVNIMSFCKEYNAKTA
EKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGIEKGSKEPQREKVGKVTADQVRT
IAQEKLPDLNCKSIDSAMRIIAGTAANMGIEVDPPILEKKEKVLL

Transcript Sequence

Transcript ID

Os03t0122200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1232247:1234438:-1 gene:Os03g0122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L11. (Os03t0122200-01)
Sequence

TCCCGCCGTTCATCTCCTCGTCTCGCCCCGCTCCAAGCGCGCCGCCATGGCCACCACCTC
CTTGTCCCTGCATGGCGTCCCATCCCCCACCGCCACCAAGCTCTCCTCCTCCTTTCTCGG
CGCCCCCGCCTCCTTCCTCCGGCCGACGCCGCCGCCGCTCGCTGCCCCCTCGCGGAGGGC
GCTCGCCGTCAGGGCCATGGCGCCACCCAAGCCCGGGGGCAAGCCCAAGAAAGTGGTGGG
CCTCATAAAGCTGGCGCTGGAGGCCGGGAAGGCCACGCCGGCGCCGCCGGTCGGCCCCGC
GCTTGGTGCCAAGGGTGTGAACATCATGTCCTTCTGCAAGGAGTACAATGCCAAGACGGC
CGAGAAGGCCGGCTACATCATCCCTGTCGAGATCACCGTGTTCGATGATAAAAGTTTCAC
CTTTATCTTGAAGACCCCTCCTGCCTCAGTCCTTCTCCTCAAGGCAGCAGGTATCGAGAA
AGGTTCAAAAGAACCGCAGCGAGAGAAGGTTGGAAAAGTAACAGCAGATCAAGTACGTAC
AATAGCTCAAGAGAAGTTGCCAGATTTGAACTGCAAGAGCATTGACTCGGCCATGAGAAT
TATAGCGGGCACTGCTGCTAATATGGGAATCGAGGTTGACCCTCCAATACTTGAGAAGAA
GGAAAAGGTGCTCTTGTAGTCTGTTTCTCTGGCACCCATGAATCACCTTACTGATGGCCA
CCTGTAGATTTTACTTCCTTTTTGTTCGTCAATATGTTGTTCCTAGTGCTTGAATCTTTT
TCCCTCCGTGGTCAGTTTGAGAGCAAACAGACCATCTACTTTTCACAAGCTGTAATCATT
TACATCCAAACTGTAGATGGTTTTCATGCTGCACCTATTTGGTGGAGTTTCCACATTTTT
TCTTGTGAAGTCCCTATGATACACCACATGTGCACATAGCTCAGCTTGTCAAACCTGAGT
AAGATCTTACTGTTCCTGTTGCCC