Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0120400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:1124982:1127056:-1 gene:Os03g0120400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os03t0120400-01)
Sequence

ATGTCGACCGTCTCCTCCGCGCTGTCGTCGTTCCTCTACTGCTGCTTCTCCCCCACCGGC
GGCCACCGGCACGGCCACCGCGCCGGCGCGTACTACTACAGCAGCCACCCGACGAGCACC
AACACCTACTACTACGAGGGTGGCCTCGCCGGACGCAGGATGGGCAGGAGCAGGCCACTG
TCACTGCAGACAGTGGAGCTCAAGGTTCGGATGTGCTGCTCAGGCTGCGAGAGGGTCGTG
AAGCATGCTCTCATGAAGCTCAGAGGGGTTGATTCGGTGGAGGTGGAGTTGGAGATGGAG
AAGGTGACGGTGACGGGGTACGTGGAGAGGCAGCGGGTGCTGAAGGAGGTGAGGCGGGCG
GGGAAGAAGGCGGAGTTCTGGCCAAACCCAGACCTGCCGCTCTACTTCACGTCGGCCAAG
GACTACTTCCACGACGAGGAGTCCTTCCGCCCCAGCTACAACTACTACCGCCACGGCTAC
AACGGCGACAAGCACGGCCACCTCCCGGAGCCCCACCGCGGCGCCGACCCCGTCAGCAAC
CTCTTCAACGACGACGACGTCAACGCCTGCTCCATCATGTAA

Peptide Sequence

PEP ID

Os03t0120400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:1124982:1127056:-1 gene:Os03g0120400 transcript:Os03t0120400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os03t0120400-01)
Sequence

MSTVSSALSSFLYCCFSPTGGHRHGHRAGAYYYSSHPTSTNTYYYEGGLAGRRMGRSRPL
SLQTVELKVRMCCSGCERVVKHALMKLRGVDSVEVELEMEKVTVTGYVERQRVLKEVRRA
GKKAEFWPNPDLPLYFTSAKDYFHDEESFRPSYNYYRHGYNGDKHGHLPEPHRGADPVSN
LFNDDDVNACSIM

Transcript Sequence

Transcript ID

Os03t0120400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1124982:1127056:-1 gene:Os03g0120400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os03t0120400-01)
Sequence

ACTTTGAGCATTTTTGTTTTGTTCTCCTTGCAGTTACAGCTGAAGCAGCAAGCAGAAGAT
TAACCCTCTTGGCTAAGATTCAGGTTAACCTGCAGCGAGAGGTTAGCTCAGCTCAGCTTA
GCTTAGCTTAAGCTTTGCTCGAGCTTGCCGTGCACTCCACTGTCTCTTTTCCGGTGGTAT
AATTTGGTGCGGCGGTGAGCTGCCGGCCATGTCGACCGTCTCCTCCGCGCTGTCGTCGTT
CCTCTACTGCTGCTTCTCCCCCACCGGCGGCCACCGGCACGGCCACCGCGCCGGCGCGTA
CTACTACAGCAGCCACCCGACGAGCACCAACACCTACTACTACGAGGGTGGCCTCGCCGG
ACGCAGGATGGGCAGGAGCAGGCCACTGTCACTGCAGACAGTGGAGCTCAAGGTTCGGAT
GTGCTGCTCAGGCTGCGAGAGGGTCGTGAAGCATGCTCTCATGAAGCTCAGAGGGGTTGA
TTCGGTGGAGGTGGAGTTGGAGATGGAGAAGGTGACGGTGACGGGGTACGTGGAGAGGCA
GCGGGTGCTGAAGGAGGTGAGGCGGGCGGGGAAGAAGGCGGAGTTCTGGCCAAACCCAGA
CCTGCCGCTCTACTTCACGTCGGCCAAGGACTACTTCCACGACGAGGAGTCCTTCCGCCC
CAGCTACAACTACTACCGCCACGGCTACAACGGCGACAAGCACGGCCACCTCCCGGAGCC
CCACCGCGGCGCCGACCCCGTCAGCAACCTCTTCAACGACGACGACGTCAACGCCTGCTC
CATCATGTAAAAAAATTCCCATGCCCGCCTCGCATTGCACGCGTACTACTACTACTACTA
GTAGCAGTGAGATCGATCGAGTGTGTGTGATCATCATTGTGTGTTCTCTCTTGTGCTCGG
CGCCGTGGTGACAGGTCAGGTAGTGTGCTGTGTGTCCATGGAGTAGTAGTAGTAGCAGAT
GCTAAAGTCAGTCAGTCAGTGTGGCAATATCGAATGAGTAGTGGCGCCCTTTACGGGTTA
CACAATGGAAAGCCAGGCTCTGTGTACGTACGTACTCTCTGTCGATCTGCAAATTGTCAA
TGGGCCCGAAACTAAAGCCAATTGATCGAATATCGTTTTTTAAAAGTAGT