Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0119000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:1024732:1026761:-1 gene:Os03g0119000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prolyl 4-hydroxylase, alpha subunit domain containing protein. (Os03t0119000-01)
Sequence

ATGCCACCGAAGCGGAAGAGGGCTGCAGCCATGGAGACGGCGGGAGGGGACGCCGCGCCG
CCGCCGCAGCAGCAGCGTCGGAACAAATCCTCGGCGGCCAACAAGGGGAAGAAGGGCGGC
GCTTCCGGCGGCGGAGGCGGCGGGAGGTGGCCACCGGTCAAGCCGAAGAAGGATCTCCAG
GTCAATCGCCTCAAGGGCACCCACCTCCTCACCGTGCCAAACTTCTTCACTTCCGCTGAG
GCGAAGGCCTTTGTCGACATTGCTGAGAATATTGGCTTCACGCACCAGGGCAGCCTCGGA
CCCCTGAAGGGTGAAGCTTATAGAGATAATGACCGGATATCTGTGACAGATCCTTTGCTT
GCTCAGACCATTTGGGAATCTGGGATAAACAAAATATTTGAGGACATCAGCATCTCTGGC
AAAGTAGCAACCAGCTTGAATCCAAATATCAGGTTCTACAGGTACACTGAAGGTCAGCGA
TTCGGTAGGCATATTGATGAGAGTGTCGACCTTGGAGATGGTTCAAGAACATTGTATACT
TTGCTAATATACCTCTCTGGCAAAGGAAGTGCAAAGGAATCATCAGGGCAAGCTCTTGTT
GGAGGGGAGACTGTTTTTTATGATCATCGTGGAGGAGTTGTCGCTGAGGTTGCTCCAGTG
CAAGGACTGGCTCTACTCCATCTTCATGGTGCCAAATGCATGCTGCATGAAGCACGGGTT
GTGAAAAAGAATATCAAGTATGTGCTTCGTTCTGATGTTGTATTTGCTTAG

Peptide Sequence

PEP ID

Os03t0119000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:1024732:1026761:-1 gene:Os03g0119000 transcript:Os03t0119000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prolyl 4-hydroxylase, alpha subunit domain containing protein. (Os03t0119000-01)
Sequence

MPPKRKRAAAMETAGGDAAPPPQQQRRNKSSAANKGKKGGASGGGGGGRWPPVKPKKDLQ
VNRLKGTHLLTVPNFFTSAEAKAFVDIAENIGFTHQGSLGPLKGEAYRDNDRISVTDPLL
AQTIWESGINKIFEDISISGKVATSLNPNIRFYRYTEGQRFGRHIDESVDLGDGSRTLYT
LLIYLSGKGSAKESSGQALVGGETVFYDHRGGVVAEVAPVQGLALLHLHGAKCMLHEARV
VKKNIKYVLRSDVVFA

Transcript Sequence

Transcript ID

Os03t0119000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1024732:1026761:-1 gene:Os03g0119000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prolyl 4-hydroxylase, alpha subunit domain containing protein. (Os03t0119000-01)
Sequence

ACAGCTTGATGCCACCGAAGCGGAAGAGGGCTGCAGCCATGGAGACGGCGGGAGGGGACG
CCGCGCCGCCGCCGCAGCAGCAGCGTCGGAACAAATCCTCGGCGGCCAACAAGGGGAAGA
AGGGCGGCGCTTCCGGCGGCGGAGGCGGCGGGAGGTGGCCACCGGTCAAGCCGAAGAAGG
ATCTCCAGGTCAATCGCCTCAAGGGCACCCACCTCCTCACCGTGCCAAACTTCTTCACTT
CCGCTGAGGCGAAGGCCTTTGTCGACATTGCTGAGAATATTGGCTTCACGCACCAGGGCA
GCCTCGGACCCCTGAAGGGTGAAGCTTATAGAGATAATGACCGGATATCTGTGACAGATC
CTTTGCTTGCTCAGACCATTTGGGAATCTGGGATAAACAAAATATTTGAGGACATCAGCA
TCTCTGGCAAAGTAGCAACCAGCTTGAATCCAAATATCAGGTTCTACAGGTACACTGAAG
GTCAGCGATTCGGTAGGCATATTGATGAGAGTGTCGACCTTGGAGATGGTTCAAGAACAT
TGTATACTTTGCTAATATACCTCTCTGGCAAAGGAAGTGCAAAGGAATCATCAGGGCAAG
CTCTTGTTGGAGGGGAGACTGTTTTTTATGATCATCGTGGAGGAGTTGTCGCTGAGGTTG
CTCCAGTGCAAGGACTGGCTCTACTCCATCTTCATGGTGCCAAATGCATGCTGCATGAAG
CACGGGTTGTGAAAAAGAATATCAAGTATGTGCTTCGTTCTGATGTTGTATTTGCTTAGC
TGGAGAATTCTCCATGCTTGTGTTGAAGTACTATAGACCTGAGCATGCTATAGACGAACG
GCTAACTTTTCCATTTTACAAACCTTTGTACTAAAGCATGTAACTGATCCAACATGAACT
TGGAAGGTGATGACATCAAATTTGTGTTTTATCTTC