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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0118600-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:1004394:1007269:1 gene:Os03g0118600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrodipicolinate reductase-like protein. (Os03t0118600-01);Similar to dihydrodipicolinate reductase. (Os03t0118600-02)
Sequence

ATGGCTACTTTATGCCACTCTGCTCATACCAGAACATTCGGAAAGATTGGCAGGAGAAAT
GCAGCAAAGGTCCTCTGCTCAACGCAGATGCCGCCATCTCAGAGCACAATCAAGGTTGTT
ATCATTGGGGCGACAAAAGAGATTGGAAGAACGGCAATAGCGGCAGTAAGTAAAGCAAGG
GGAATGGAGCTTGCAGGGGCCATAGATTCTCAGTGTATAGGCCTAGATGCAGGAGAGATA
AGTGGCATGGAAGAAGCCCTGGAAATTCCGGTGCTCAATGATCTCACAATGGTTCTGGGC
TCAATTGCACAAGTATTGGCCTCTTCATTGTACTATAAAATGCTTATATCCACTTGTACA
GTTGTACTGTTATACACTTCACGGGTTTGCTATTTGAAACTTATGTTCTTTCAGACCAGA
GCAACTGGAGTGGTGGTTGATTTTAGTGAACCTTCAACTGTTTATGATAATGTCAAACAG
GCAGCGGCATTTGGTTTAAACAGTGTGGTGTACGTTCCAAAAATTGAGTTAGATACAGTA
ACTGAGCTGTCAGCATTCTGCGAGAAGGCAAGCATGGGTTGCTTGGTCACACCAACATTA
TCAATTGGCTCAGTGCTCCTACAGCAAGCTGCTATCCAGGCCTCGTTCCACTACAACAAC
GTCGAGATAGTGGAATCAAGACCTAACCCATCGGATTTGCCATCGCAAGATGCAATACAG
ATTGCAAATAATATAACAGATCTTGGTCAGATATACAACAGGGAAGATATGGACTCCGAT
AATCCAGCAAGGGGTCAGATACTTGGAGAAGATGGGGTGCGTGTCCACAGTATGGTTCTA
CCAGGCCTTGCTTCCAGTACATCGATCCATTTCTCGGGCCCTGGAGAGATTTACACCTTA
AGACATGATGTGACAAATGTTCAATGCCTAATGCCAGGATTAATTCTGGCAATACGGAAG
GTGATACGCTTGAAGAACTTGATTTATGGTCTGGAGAAGTTCTTGTAG

Peptide Sequence

PEP ID

Os03t0118600-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:1004394:1007269:1 gene:Os03g0118600 transcript:Os03t0118600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrodipicolinate reductase-like protein. (Os03t0118600-01);Similar to dihydrodipicolinate reductase. (Os03t0118600-02)
Sequence

MATLCHSAHTRTFGKIGRRNAAKVLCSTQMPPSQSTIKVVIIGATKEIGRTAIAAVSKAR
GMELAGAIDSQCIGLDAGEISGMEEALEIPVLNDLTMVLGSIAQVLASSLYYKMLISTCT
VVLLYTSRVCYLKLMFFQTRATGVVVDFSEPSTVYDNVKQAAAFGLNSVVYVPKIELDTV
TELSAFCEKASMGCLVTPTLSIGSVLLQQAAIQASFHYNNVEIVESRPNPSDLPSQDAIQ
IANNITDLGQIYNREDMDSDNPARGQILGEDGVRVHSMVLPGLASSTSIHFSGPGEIYTL
RHDVTNVQCLMPGLILAIRKVIRLKNLIYGLEKFL

Transcript Sequence

Transcript ID

Os03t0118600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:1004394:1007269:1 gene:Os03g0118600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrodipicolinate reductase-like protein. (Os03t0118600-01);Similar to dihydrodipicolinate reductase. (Os03t0118600-02)
Sequence

TTTCATGTAAGCTCAGTCTTCAGAACAAAATCATGGCTACTTTATGCCACTCTGCTCATA
CCAGAACATTCGGAAAGATTGGCAGGAGAAATGCAGCAAAGGTCCTCTGCTCAACGCAGA
TGCCGCCATCTCAGAGCACAATCAAGGTTGTTATCATTGGGGCGACAAAAGAGATTGGAA
GAACGGCAATAGCGGCAGTAAGTAAAGCAAGGGGAATGGAGCTTGCAGGGGCCATAGATT
CTCAGTGTATAGGCCTAGATGCAGGAGAGATAAGTGGCATGGAAGAAGCCCTGGAAATTC
CGGTGCTCAATGATCTCACAATGGTTCTGGGCTCAATTGCACAAGTATTGGCCTCTTCAT
TGTACTATAAAATGCTTATATCCACTTGTACAGTTGTACTGTTATACACTTCACGGGTTT
GCTATTTGAAACTTATGTTCTTTCAGACCAGAGCAACTGGAGTGGTGGTTGATTTTAGTG
AACCTTCAACTGTTTATGATAATGTCAAACAGGCAGCGGCATTTGGTTTAAACAGTGTGG
TGTACGTTCCAAAAATTGAGTTAGATACAGTAACTGAGCTGTCAGCATTCTGCGAGAAGG
CAAGCATGGGTTGCTTGGTCACACCAACATTATCAATTGGCTCAGTGCTCCTACAGCAAG
CTGCTATCCAGGCCTCGTTCCACTACAACAACGTCGAGATAGTGGAATCAAGACCTAACC
CATCGGATTTGCCATCGCAAGATGCAATACAGATTGCAAATAATATAACAGATCTTGGTC
AGATATACAACAGGGAAGATATGGACTCCGATAATCCAGCAAGGGGTCAGATACTTGGAG
AAGATGGGGTGCGTGTCCACAGTATGGTTCTACCAGGCCTTGCTTCCAGTACATCGATCC
ATTTCTCGGGCCCTGGAGAGATTTACACCTTAAGACATGATGTGACAAATGTTCAATGCC
TAATGCCAGGATTAATTCTGGCAATACGGAAGGTGATACGCTTGAAGAACTTGATTTATG
GTCTGGAGAAGTTCTTGTAGGATTTTATTAGAATGCTGGTAGGAATTTTCATCCCACATA
TCAAGAGAAATACAAGCTATGGATATTCATGGTAAGGATAATGCAAAACAATGTTACCCA
AGATACACAATCTTGCTGCAAGTTCAAGGTGGAAACCAAACACATGTCAGCAATATTCGG
GAAAGCAACCATGGTGATAACCATTGTCACCAAAATTGAGCCAATTAATAAATGAGTGGT
TGAATTGACTCAAGGCCTCAAGCATATGAGTTCCATCACAGAACATAAGGGAACTCTAGC
TGTAAGGAACTATGTTTGGTCCTGGGTGATGCTGACGCAAAATGTTTATAACAATGCATG
GTGCGTTGATAGGGAACTGTTTTGATCCCTTGAGATGAAGTGATGTCCCCTTGTTTGTAA
AACCCATCAAAATAGTTATGAGTAACCTTT