Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0118100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:985771:989760:1 gene:Os03g0118100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0118100-01)
Sequence

ATGGCGGTGGCGGCGCCGGCGAGGAGGTTGACGCCGTTGACGCTGCGGGACTTCCTGGAG
CAGTCCAGCAGCGAAGGCTTCCGCGCCTACCCGCGTTTCCCCGTTGCCGACGAGGGAGTG
GCCGGAGGAGACCTCGCGCCGCCGGTGCGCCTCCTCATCGAGGCCGGGCTACGCCGGAGC
CCGTCGCGGTTGCCCTCCTTCTACAACTTCTTCCACAAGAGCCCCGGCACGCTCGCCAAG
ATCTCGCGCCTCTCCAGGAGCCTCTCGCGGCGGTTCAGGGACGGCCTCTGGAGGCGCCGC
GGCGAGGATGACGGCGAGGAAGACGACGACATTGCCGTCGACGAGAGGGACTCGCTCGGG
CTGCCGTCGCCGGTGGTCAGCAGCTGCTCCTCGTCGGAGTGTGAGTACATGGCCGAGTCA
GAGGCTGAGCTGGCTACGACGGAGGAGGAGAAGTGCGCGTCGGCGTCGTCGGCGTCGGAG
TACGAAAAGACGTCGCAGTCGAGCACGGGGAGCGTCGCCTTCCATGGCGCTGCCGACGCC
GGAGGAGACGGGCATAAGGAGGATGTGGGTGACGAGCCCGTGGGGCGCAAGTTGGAGATG
GAGGACAAGCAACAGCTGAGCCCCGTGTCCGTTCTGGATTTCCCCTTCGATGACGACGAC
GGCGAGGAAGGAAGCGATGCCGGCATGTGCTCGCCGTCCTTCCAACAGTGCCTCGCCGAG
CTCCAGAGATCGAAGGCGGAGCTGCTGCACAAGATCCGACGGCTGGAGGGCCTGACGCAG
GTGGTCGTCCCCGTGGATCTCGAGGCGCAATTCACCGAGTCTGATTCCTCCGAGCGCACG
CATCTCAACGCCAACTCGACTAGCTCTTCTGATGACACCGCGACGACGGCGCCCACGACG
CCACGGCAATGCACGGACGACCAAGATGTCGTTAATCACGGCGAGGAGGAGGAGGAGGAG
CACAGCCTGCTCGCGCGGCTGCTCGAGTCGGTTGTTGTCACGGACGAGGTCTCCGAGTGG
CTCCTGCTCGACTTCTTTGCCGAGGGAGTGGACCGGCTCCGGTCGTCGGCGTCCAGCTGC
CCTCTCAACGATTGCGAGGAGGCGGCGCTGCTGCGCGCCGCGGGGGATTGGGCGCGCGGC
GCGGGGCAGCGGTGGGGCGTCGGGGACGTGGTGTTCTCCGGGTGGGCGGCGGTGGCGGAC
ATGGAGCGGAGCCGGAGGTGGATGTGCGTCGCCGAGGAGGAGCGGGACGTCGGCGCGGAG
GTGGACGGGCTCGTGATGGACGCGTTGGTGGACGAGCTGGTCGCCGACTTGGCACTTGGT
GGTGCGACCACGGTAGGGGTGGAAGTGTGTACGTGCCGCCGATGA

Peptide Sequence

PEP ID

Os03t0118100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:985771:989760:1 gene:Os03g0118100 transcript:Os03t0118100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0118100-01)
Sequence

MAVAAPARRLTPLTLRDFLEQSSSEGFRAYPRFPVADEGVAGGDLAPPVRLLIEAGLRRS
PSRLPSFYNFFHKSPGTLAKISRLSRSLSRRFRDGLWRRRGEDDGEEDDDIAVDERDSLG
LPSPVVSSCSSSECEYMAESEAELATTEEEKCASASSASEYEKTSQSSTGSVAFHGAADA
GGDGHKEDVGDEPVGRKLEMEDKQQLSPVSVLDFPFDDDDGEEGSDAGMCSPSFQQCLAE
LQRSKAELLHKIRRLEGLTQVVVPVDLEAQFTESDSSERTHLNANSTSSSDDTATTAPTT
PRQCTDDQDVVNHGEEEEEEHSLLARLLESVVVTDEVSEWLLLDFFAEGVDRLRSSASSC
PLNDCEEAALLRAAGDWARGAGQRWGVGDVVFSGWAAVADMERSRRWMCVAEEERDVGAE
VDGLVMDALVDELVADLALGGATTVGVEVCTCRR

Transcript Sequence

Transcript ID

Os03t0118100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:985771:989760:1 gene:Os03g0118100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0118100-01)
Sequence

ACCATCTGCCACAGCCGCGAGGCTTCACTTCCACTACTACTACGGTACTACCCCCCGCTG
TTCCGCCCGCGCATCCACCGATCCGTCTCAGCTCAACACCCCACGCTGCCACGCTGCCAG
CAACGCAACCCCCGAGTGCATCTCTCGCGCGCGCGCGTACATGGCAACAGCGTAGTACTT
CGCCACTTGCTGCGGAGACGACGATGGCGGTGGCGGCGCCGGCGAGGAGGTTGACGCCGT
TGACGCTGCGGGACTTCCTGGAGCAGTCCAGCAGCGAAGGCTTCCGCGCCTACCCGCGTT
TCCCCGTTGCCGACGAGGGAGTGGCCGGAGGAGACCTCGCGCCGCCGGTGCGCCTCCTCA
TCGAGGCCGGGCTACGCCGGAGCCCGTCGCGGTTGCCCTCCTTCTACAACTTCTTCCACA
AGAGCCCCGGCACGCTCGCCAAGATCTCGCGCCTCTCCAGGAGCCTCTCGCGGCGGTTCA
GGGACGGCCTCTGGAGGCGCCGCGGCGAGGATGACGGCGAGGAAGACGACGACATTGCCG
TCGACGAGAGGGACTCGCTCGGGCTGCCGTCGCCGGTGGTCAGCAGCTGCTCCTCGTCGG
AGTGTGAGTACATGGCCGAGTCAGAGGCTGAGCTGGCTACGACGGAGGAGGAGAAGTGCG
CGTCGGCGTCGTCGGCGTCGGAGTACGAAAAGACGTCGCAGTCGAGCACGGGGAGCGTCG
CCTTCCATGGCGCTGCCGACGCCGGAGGAGACGGGCATAAGGAGGATGTGGGTGACGAGC
CCGTGGGGCGCAAGTTGGAGATGGAGGACAAGCAACAGCTGAGCCCCGTGTCCGTTCTGG
ATTTCCCCTTCGATGACGACGACGGCGAGGAAGGAAGCGATGCCGGCATGTGCTCGCCGT
CCTTCCAACAGTGCCTCGCCGAGCTCCAGAGATCGAAGGCGGAGCTGCTGCACAAGATCC
GACGGCTGGAGGGCCTGACGCAGGTGGTCGTCCCCGTGGATCTCGAGGCGCAATTCACCG
AGTCTGATTCCTCCGAGCGCACGCATCTCAACGCCAACTCGACTAGCTCTTCTGATGACA
CCGCGACGACGGCGCCCACGACGCCACGGCAATGCACGGACGACCAAGATGTCGTTAATC
ACGGCGAGGAGGAGGAGGAGGAGCACAGCCTGCTCGCGCGGCTGCTCGAGTCGGTTGTTG
TCACGGACGAGGTCTCCGAGTGGCTCCTGCTCGACTTCTTTGCCGAGGGAGTGGACCGGC
TCCGGTCGTCGGCGTCCAGCTGCCCTCTCAACGATTGCGAGGAGGCGGCGCTGCTGCGCG
CCGCGGGGGATTGGGCGCGCGGCGCGGGGCAGCGGTGGGGCGTCGGGGACGTGGTGTTCT
CCGGGTGGGCGGCGGTGGCGGACATGGAGCGGAGCCGGAGGTGGATGTGCGTCGCCGAGG
AGGAGCGGGACGTCGGCGCGGAGGTGGACGGGCTCGTGATGGACGCGTTGGTGGACGAGC
TGGTCGCCGACTTGGCACTTGGTGGTGCGACCACGGTAGGGGTGGAAGTGTGTACGTGCC
GCCGATGAAGTTTCGAGCGTGTCAGGGTGTAACGTTTTGTGTGGACGTTAACTTGAGTGT
TAACGTGACAGGGTTTACGCCGAATCGTTCAAAAACAGGATGTGTATGATGCAAGAGCGG
GTGCTTTCAGTCATGGGCTTTATGACTTTCTCAGGATGAATCAGTACATATAGCAGATTA
AT