Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0115400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:870844:875516:1 gene:Os03g0115400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-60 description:WD40 repeat-like domain containing protein. (Os03t0115400-01)
Sequence	ATGTCCGTCATGGCGCGGCCCCGCTTCGAGGAGGATGACGAGGATGAGTTCTTTGACTCG AGGGAGGTCATGTCGCCGGCGTCCGTCTCTTCTCCGGCGAGCTCCGGGCGCTACGACGGG CCCATGCTCGAGGTGTGGGCCACCGACCCGTGCAGCGTCCATGAGCGCCGTCAGAGGTTC ATCAAGTCCTTGGGCCTCTCGGATTCGAGCCCCTCCGCCGGCGGCGGCGGCGACCGGCCC GACGAGGAGCCGTGCTCGAGGTCCAGTGCCGCAGAAGAGATCCTCCCGTGCAGCCCCACC GTCGAGCTGGTCTCAGCCGTCCCCAGTTTTGCGTGCAGAGGCGAGGAGCCGGGAGCGTCA GGCGGCGGCGGCGGCGCGGAGGTGTTGGATTGTGTATTCAAGAACTTGGACGATGGTACA GTGTTTGTCGTCGACGAGATGGGAAAAGATGGGAGTTTCAGGAGCCTCAGGGACAGGCGA TCCAACCGGACAGTTACTGCAGCGGAATTCGAACGGACCTACGGCTCGTCCCCATTCATC TGTGAGCTGATGCGGCGGGTGGATGATTCGGATGAGTCCTCTGCTGTGGAGAAGGCTCTG GTCAGGGGAAGGAGAAGGAGGAGGAGATTTGGATGGCTGCGCAGGCTCGGCATCCGTGGC TGCGTCGTCGATGTGGAGGAGGACGATGAGACGAATTCAACATCCTCGAGTTCTTGTCGG AGTTGCTCTGGGAAGGTTGATAGGGTCAAGGTGAGGCATTACAAGAAGAGGTCAAAGGAA TTGTCCGCGGTGTACAGGGGCCAAGACATCAAGGCGCACGAAGGCGCAATTGTGACCATG AAGTTTAGCTCTGATGGACAGTATCTGGCCACTGGAGGTGAGGATGGGGTTGTGCGTGTG TGGCGGGTGGTGGAGGGGGAGAGGCCCAATGAACTTGACTTTGCCGAAGATGATCCTTCA TGCGTGTTCTTCACAGTCAATGAAAACTCCGAATTGGCCCCTGTCAACTCCAGTGAAGGG AGTAAGAGCAAGCACTACAAGAACTCAAAGGTGTCGACAGATCCAGCCTGTGTTGTGATC CCTCATAGGACCTTTGCATTATCCCAGGAGCCTGTGCATGAATTCTATGGACATGATGAT GCGATCTTGGATCTTTCATGGTCAAAAAATAGGGACTTACTTTCTTCATCCATGGATAAA ACTGTACGATTGTGGCAGGTTGGGTGCAATAGTTGCCTGAAGGTTTTCTCCCATACTAAC TACGTAACATGTGTGCAGTTTCATCCTACCAGTGACAATTATTTTATCAGTGGTTGTATC GACGGATTGGTTCGCATTTGGGATGTTCGTAGATGCCAAGTCGTGGACTGGGCTGATACC AAAGAGATAATCACTGCAGTTTGTTACCGCCCTGATGGAAAGGCCGCAGTGGTTGGGACC ATAACAGGGAATTGTCGCCACTACGATGCATCAGAAAATCACCTGGAGCTGGAATCTCAA GTCGCTCTCAATGGAAGAAAGAAATCTCCACTTAAAAGAATAATCGGTTTCCAGTACTGC CCATCTGATCCAAAGAAATTGATGGTAACATCTGGCGACTCGCAAGTCCGTATTCTTGAT GGGCTTCACGTAATTTCCAACTACAAAGGACTGCGAAGTTCAAGTCAAGTTGCTGCATCA TTCACACCAGATGGAGATCACATTATATCTGCTAGTGATGATTCCAGTATCTACATGTGG AACTATGCAAACCAAATAGCTCCCGTCACAAACCATGTGAAGACTGTATGGTCAAATGAG CACTTTTCCTGCCATGATGTGGCCATTGCGATACCATGGAATGCCTCTCAGACAAGGAAT TCTATTTCACTGGCTTGCAGTATCACTTCTTCACAGCAAGAAGTCTTGGATGAGTTCCAC AATGAACATGATAGCTCATCATGTTCTCATACTGAGGATTCCCCTGATGGTGATAGTCTG TACCAATTACCATCTGGAAATTTCACTCTTAGCAGTGCCTTCTTTGCGGAATCTGCTCCA AGGGGATCAGCGACATGGCCAGAGGAGCAGTTGCCATCAAATTCGACAACACAGTCTACC TTGAGGAAATCTCAGTACAAGTTCCTGAAGGCTTCTTGCCAGAATGCTGCTACGCACGCC TGGGGCCAGGTAATAGTGGCTGCAGGCTGGGATGGCTACATCAGATCCTTCCAGAACTAT GGCTTACCTGTGCAAGTGTGA

Peptide Sequence

PEP ID	Os03t0115400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:870844:875516:1 gene:Os03g0115400 transcript:Os03t0115400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-60 description:WD40 repeat-like domain containing protein. (Os03t0115400-01)
Sequence	MSVMARPRFEEDDEDEFFDSREVMSPASVSSPASSGRYDGPMLEVWATDPCSVHERRQRF IKSLGLSDSSPSAGGGGDRPDEEPCSRSSAAEEILPCSPTVELVSAVPSFACRGEEPGAS GGGGGAEVLDCVFKNLDDGTVFVVDEMGKDGSFRSLRDRRSNRTVTAAEFERTYGSSPFI CELMRRVDDSDESSAVEKALVRGRRRRRRFGWLRRLGIRGCVVDVEEDDETNSTSSSSCR SCSGKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATGGEDGVVRV WRVVEGERPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVI PHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTN YVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGT ITGNCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILD GLHVISNYKGLRSSSQVAASFTPDGDHIISASDDSSIYMWNYANQIAPVTNHVKTVWSNE HFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSCSHTEDSPDGDSL YQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAATHA WGQVIVAAGWDGYIRSFQNYGLPVQV

Transcript Sequence

Transcript ID	Os03t0115400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:870844:875516:1 gene:Os03g0115400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-60 description:WD40 repeat-like domain containing protein. (Os03t0115400-01)
Sequence	GGTTGGTTCCCTTCTTGAGACCCCAAAACCCAACTAGGAAGGACAAGGACACATCCCTCT CCCTCTTCCACCAAGAGAGATAGAGCCAAGAACCGGACGAGGTAGAAGAGATTGAGCCGC CACGGCAGTGGGAGCGCGCGCGCGAGTTCCCCGAGATCCGCGAGATCTCCGTCGCCGGCT CATGCCACTGGTCGGTTCTTGGGGCGGCGGCGGCGGCGGCGGGGGGTGGTGAGTCTGTGG CCGTTTCTTGCGGCGTGGTGAGGTGAGGGGAGGGAGAAAGAGAGGCTGCACATGTCCGTC ATGGCGCGGCCCCGCTTCGAGGAGGATGACGAGGATGAGTTCTTTGACTCGAGGGAGGTC ATGTCGCCGGCGTCCGTCTCTTCTCCGGCGAGCTCCGGGCGCTACGACGGGCCCATGCTC GAGGTGTGGGCCACCGACCCGTGCAGCGTCCATGAGCGCCGTCAGAGGTTCATCAAGTCC TTGGGCCTCTCGGATTCGAGCCCCTCCGCCGGCGGCGGCGGCGACCGGCCCGACGAGGAG CCGTGCTCGAGGTCCAGTGCCGCAGAAGAGATCCTCCCGTGCAGCCCCACCGTCGAGCTG GTCTCAGCCGTCCCCAGTTTTGCGTGCAGAGGCGAGGAGCCGGGAGCGTCAGGCGGCGGC GGCGGCGCGGAGGTGTTGGATTGTGTATTCAAGAACTTGGACGATGGTACAGTGTTTGTC GTCGACGAGATGGGAAAAGATGGGAGTTTCAGGAGCCTCAGGGACAGGCGATCCAACCGG ACAGTTACTGCAGCGGAATTCGAACGGACCTACGGCTCGTCCCCATTCATCTGTGAGCTG ATGCGGCGGGTGGATGATTCGGATGAGTCCTCTGCTGTGGAGAAGGCTCTGGTCAGGGGA AGGAGAAGGAGGAGGAGATTTGGATGGCTGCGCAGGCTCGGCATCCGTGGCTGCGTCGTC GATGTGGAGGAGGACGATGAGACGAATTCAACATCCTCGAGTTCTTGTCGGAGTTGCTCT GGGAAGGTTGATAGGGTCAAGGTGAGGCATTACAAGAAGAGGTCAAAGGAATTGTCCGCG GTGTACAGGGGCCAAGACATCAAGGCGCACGAAGGCGCAATTGTGACCATGAAGTTTAGC TCTGATGGACAGTATCTGGCCACTGGAGGTGAGGATGGGGTTGTGCGTGTGTGGCGGGTG GTGGAGGGGGAGAGGCCCAATGAACTTGACTTTGCCGAAGATGATCCTTCATGCGTGTTC TTCACAGTCAATGAAAACTCCGAATTGGCCCCTGTCAACTCCAGTGAAGGGAGTAAGAGC AAGCACTACAAGAACTCAAAGGTGTCGACAGATCCAGCCTGTGTTGTGATCCCTCATAGG ACCTTTGCATTATCCCAGGAGCCTGTGCATGAATTCTATGGACATGATGATGCGATCTTG GATCTTTCATGGTCAAAAAATAGGGACTTACTTTCTTCATCCATGGATAAAACTGTACGA TTGTGGCAGGTTGGGTGCAATAGTTGCCTGAAGGTTTTCTCCCATACTAACTACGTAACA TGTGTGCAGTTTCATCCTACCAGTGACAATTATTTTATCAGTGGTTGTATCGACGGATTG GTTCGCATTTGGGATGTTCGTAGATGCCAAGTCGTGGACTGGGCTGATACCAAAGAGATA ATCACTGCAGTTTGTTACCGCCCTGATGGAAAGGCCGCAGTGGTTGGGACCATAACAGGG AATTGTCGCCACTACGATGCATCAGAAAATCACCTGGAGCTGGAATCTCAAGTCGCTCTC AATGGAAGAAAGAAATCTCCACTTAAAAGAATAATCGGTTTCCAGTACTGCCCATCTGAT CCAAAGAAATTGATGGTAACATCTGGCGACTCGCAAGTCCGTATTCTTGATGGGCTTCAC GTAATTTCCAACTACAAAGGACTGCGAAGTTCAAGTCAAGTTGCTGCATCATTCACACCA GATGGAGATCACATTATATCTGCTAGTGATGATTCCAGTATCTACATGTGGAACTATGCA AACCAAATAGCTCCCGTCACAAACCATGTGAAGACTGTATGGTCAAATGAGCACTTTTCC TGCCATGATGTGGCCATTGCGATACCATGGAATGCCTCTCAGACAAGGAATTCTATTTCA CTGGCTTGCAGTATCACTTCTTCACAGCAAGAAGTCTTGGATGAGTTCCACAATGAACAT GATAGCTCATCATGTTCTCATACTGAGGATTCCCCTGATGGTGATAGTCTGTACCAATTA CCATCTGGAAATTTCACTCTTAGCAGTGCCTTCTTTGCGGAATCTGCTCCAAGGGGATCA GCGACATGGCCAGAGGAGCAGTTGCCATCAAATTCGACAACACAGTCTACCTTGAGGAAA TCTCAGTACAAGTTCCTGAAGGCTTCTTGCCAGAATGCTGCTACGCACGCCTGGGGCCAG GTAATAGTGGCTGCAGGCTGGGATGGCTACATCAGATCCTTCCAGAACTATGGCTTACCT GTGCAAGTGTGACATGGTACTAGACATGCATCATTTACCATTGATAGTCCAAGGCAAAAG CTTGGGTATGCCTTGAGAAGTCTGGCTGGCCCTGACGCCCGTCCTGATTCATTATTTCAG CACAAAGCGTCACATGGCTGGTGCGTGAGCTGAATTGCTTGTGGACCAGAAGTTGTATGT AGTCTGAGTGGTCCTTCAAGATCTTGACAGCGTCAACACATCGTAGCAGGCCCGCGGAAG ATGAATCGCCTCGCAGAATTATGCAAAGGCATGTGGGGATTTAGGCAGCAACACGTTGGT GTTCTTTCTTTCTTTCTCTTCTTTGTTTTGGCTCCTGTTAGGGCCATCCGTAAATATATA TAGGAGACATACATATTTTTGCCGAGTTGAAACTTCCCTCGCCCGAACCGGATAGTCGAT GGACAATGGGCAAGTGGAGAGCTAGAAATCACTGTTGGATAGGGGGGAAAAATTCAGAGT GGTGGGGGTGCACATACTACTGGATTCGTTTCATTTGTTCACATTTCATGATTCATAGCC TGGCTGAGTCTATGATGGACATTGATACTG