Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0113700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:766760:771257:-1 gene:Os03g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRON-SULFUR CLUSTER PROTEIN 24 description:Similar to Heat shock 70 kDa protein, mitochondrial precursor. (Os03t0113700-01)
Sequence	ATGGCGGCGTCGCTGCTTCTCCGCGCCGTGCGCCGGCGAGACCTCGCGTCTCCTCTCGGG ACCTTGACCGCGAACGTCCAGTCAAAGTGTGCTGCAAATGTGTGTTCAAGATGGGCTGGT TTTGCAAGAACTTTCAGTGCAAAAGCAACTGGAAATGAGGTTATTGGAATTGATTTAGGA ACAACTAACTCATGTGTTTCAGTTATGGAAGGAAAGAACCCAAAAGTAATAGAGAATTCA GAAGGAACCAGGACAACACCGTCAGTAGTTGCTTTCAATCAGAAGGGAGAGCTACTTGTT GGAACACCAGCCAAGCGTCAAGCAGTGACCAACCCACAGAACACTTTCTTTGGTACAAAG CGTCTGATAGGGCGGCGCTTTGATGACCCGCAAACTCAGAAAGAGATGAAAATGGTACCA TATAAAATTGTGAAGGCTCTGAATGGTGATGCTTGGCTAGAGACAACAGATGGCAAGCAG TACTCACCGAGCCAGATTGGTGCCTTTGTTTTGACCAAGATGAAGGAGACAGCTGAATCT TACCTTGGAAAATCTGTTTCCAAGGCTGTGATTACTGTTCCAGCTTATTTCAATGATGCT CAGCGTCAGGCTACCAAGGATGCTGGTCGCATCGCTGGACTTGATGTCCAAAGAATCATC AATGAACCCACTGCTGCTGCTCTGTCTTATGGAACAAACAACAAGGAGGGTTTGATCGCT GTGTTTGACCTTGGAGGAGGAACATTTGATGTGTCCATTCTAGAAATATCCAATGGAGTT TTTGAGGTCAAAGCAACAAATGGTGACACTTTTCTGGGTGGAGAAGACTTTGATAATACT CTTTTGGAGTTTTTAGTAAGTGAGTTCAAAAGAACTGAAGGTATTGATCTGTCAAAAGAC AGACTGGCTCTGCAGAGGCTACGCGAAGCAGCTGAGAAAGCAAAAATTGAACTCTCATCA ACAGCCCAGACCGAGATTAATCTTCCATTCATCACAGCTGATTCCTCTGGAGCAAAGCAT CTAAATATCACATTGACAAGATCGAAGTTTGAAAGTTTGGTGAATAGTCTGATTGAGAGG ACTAGAGACCCATGCAAGAGCTGCTTGAAGGATGCTGGTATAACTACTAAAGATGTTGAT GAGGTCCTTCTTGTTGGTGGCATGACAAGGGTTCCAAAAGTGCAGGAAGTTGTTTCTGAA ATCTTTGGTAAGGCCCCTAGCAAAGGAGTAAACCCAGATGAAGCTGTGGCCATGGGTGCT GCTATTCAGGGCGGCATTCTCCGTGGAGATGTAAAGGATCTTCTCCTCCTTGATGTAACC CCTCTATCGCTTGGTATCGAGACTCTTGGTGGTATCTTCACCAGACTAATCAACAGGAAC ACTACAGTCCCCACGAAGAAAAGTCAGGTGTTCTCAACTGCTGCTGACAACCAGACGCAA GTGGGTATTAAGGTGTTGCAAGGTGAGCGTGAGATGGCAGCAGACAACAAACTTCTTGGT GAGTTTGACCTTGTTGGCATTCCACCAGCGCCAAGAGGTATGCCACAGATTGAGGTCACA TTCGACATCGATGCCAATGGAATCGTGACGGTCTCAGCAAAGGATAAGGCAACTGGAAAG GAGCAGCAGATCACAATTCGATCCTCTGGTGGGCTTTCTGAGGCTGAGATCCAGAAGATG GTCCATGAGGCTGAGCTGCACTCCCAGAAGGATCAAGAACGGAAAGCCCTCATCGACATC AGAAACACCGCAGACACAACCATCTACAGCATAGAGAAAAGTCTGGGTGAGTACAGGGAC AAGATACCTGCAGAGGTTGCCTCCGAGATCGAGACGGCGATTGCCGATCTCCGCAATGAG ATGGCCTCGGATGACATTGAGAAGATAAAGAGCAAGATCGAAGCGGCCAACAAGGCTGTC TCAAAGATTGGGCAACACATGTCTGGTGGTGGGTCTGGTGGCTCGCAAGCAGGATCACAG GGCGGAGGTGACCAGGCTCCTGAGGCTGAGTATGAGGAGGTCAAGAAGTGA

Peptide Sequence

PEP ID	Os03t0113700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:766760:771257:-1 gene:Os03g0113700 transcript:Os03t0113700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRON-SULFUR CLUSTER PROTEIN 24 description:Similar to Heat shock 70 kDa protein, mitochondrial precursor. (Os03t0113700-01)
Sequence	MAASLLLRAVRRRDLASPLGTLTANVQSKCAANVCSRWAGFARTFSAKATGNEVIGIDLG TTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPQNTFFGTK RLIGRRFDDPQTQKEMKMVPYKIVKALNGDAWLETTDGKQYSPSQIGAFVLTKMKETAES YLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGTNNKEGLIA VFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKD RLALQRLREAAEKAKIELSSTAQTEINLPFITADSSGAKHLNITLTRSKFESLVNSLIER TRDPCKSCLKDAGITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKAPSKGVNPDEAVAMGA AIQGGILRGDVKDLLLLDVTPLSLGIETLGGIFTRLINRNTTVPTKKSQVFSTAADNQTQ VGIKVLQGEREMAADNKLLGEFDLVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGK EQQITIRSSGGLSEAEIQKMVHEAELHSQKDQERKALIDIRNTADTTIYSIEKSLGEYRD KIPAEVASEIETAIADLRNEMASDDIEKIKSKIEAANKAVSKIGQHMSGGGSGGSQAGSQ GGGDQAPEAEYEEVKK

Transcript Sequence

Transcript ID	Os03t0113700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:766760:771257:-1 gene:Os03g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRON-SULFUR CLUSTER PROTEIN 24 description:Similar to Heat shock 70 kDa protein, mitochondrial precursor. (Os03t0113700-01)
Sequence	AGACTCCAGAGCATTCCACGGCCTCCCTACAAGTCGCGGCCGCGCCGCCGTCGTCCGCCG CTCATCGAATCCAGCGGAAGCGGAAGCCTCGCAAACCCTCGTGCTGTCTCCGGCCAGGCC AGCCATGGCGGCGTCGCTGCTTCTCCGCGCCGTGCGCCGGCGAGACCTCGCGTCTCCTCT CGGGACCTTGACCGCGAACGTCCAGTCAAAGTGTGCTGCAAATGTGTGTTCAAGATGGGC TGGTTTTGCAAGAACTTTCAGTGCAAAAGCAACTGGAAATGAGGTTATTGGAATTGATTT AGGAACAACTAACTCATGTGTTTCAGTTATGGAAGGAAAGAACCCAAAAGTAATAGAGAA TTCAGAAGGAACCAGGACAACACCGTCAGTAGTTGCTTTCAATCAGAAGGGAGAGCTACT TGTTGGAACACCAGCCAAGCGTCAAGCAGTGACCAACCCACAGAACACTTTCTTTGGTAC AAAGCGTCTGATAGGGCGGCGCTTTGATGACCCGCAAACTCAGAAAGAGATGAAAATGGT ACCATATAAAATTGTGAAGGCTCTGAATGGTGATGCTTGGCTAGAGACAACAGATGGCAA GCAGTACTCACCGAGCCAGATTGGTGCCTTTGTTTTGACCAAGATGAAGGAGACAGCTGA ATCTTACCTTGGAAAATCTGTTTCCAAGGCTGTGATTACTGTTCCAGCTTATTTCAATGA TGCTCAGCGTCAGGCTACCAAGGATGCTGGTCGCATCGCTGGACTTGATGTCCAAAGAAT CATCAATGAACCCACTGCTGCTGCTCTGTCTTATGGAACAAACAACAAGGAGGGTTTGAT CGCTGTGTTTGACCTTGGAGGAGGAACATTTGATGTGTCCATTCTAGAAATATCCAATGG AGTTTTTGAGGTCAAAGCAACAAATGGTGACACTTTTCTGGGTGGAGAAGACTTTGATAA TACTCTTTTGGAGTTTTTAGTAAGTGAGTTCAAAAGAACTGAAGGTATTGATCTGTCAAA AGACAGACTGGCTCTGCAGAGGCTACGCGAAGCAGCTGAGAAAGCAAAAATTGAACTCTC ATCAACAGCCCAGACCGAGATTAATCTTCCATTCATCACAGCTGATTCCTCTGGAGCAAA GCATCTAAATATCACATTGACAAGATCGAAGTTTGAAAGTTTGGTGAATAGTCTGATTGA GAGGACTAGAGACCCATGCAAGAGCTGCTTGAAGGATGCTGGTATAACTACTAAAGATGT TGATGAGGTCCTTCTTGTTGGTGGCATGACAAGGGTTCCAAAAGTGCAGGAAGTTGTTTC TGAAATCTTTGGTAAGGCCCCTAGCAAAGGAGTAAACCCAGATGAAGCTGTGGCCATGGG TGCTGCTATTCAGGGCGGCATTCTCCGTGGAGATGTAAAGGATCTTCTCCTCCTTGATGT AACCCCTCTATCGCTTGGTATCGAGACTCTTGGTGGTATCTTCACCAGACTAATCAACAG GAACACTACAGTCCCCACGAAGAAAAGTCAGGTGTTCTCAACTGCTGCTGACAACCAGAC GCAAGTGGGTATTAAGGTGTTGCAAGGTGAGCGTGAGATGGCAGCAGACAACAAACTTCT TGGTGAGTTTGACCTTGTTGGCATTCCACCAGCGCCAAGAGGTATGCCACAGATTGAGGT CACATTCGACATCGATGCCAATGGAATCGTGACGGTCTCAGCAAAGGATAAGGCAACTGG AAAGGAGCAGCAGATCACAATTCGATCCTCTGGTGGGCTTTCTGAGGCTGAGATCCAGAA GATGGTCCATGAGGCTGAGCTGCACTCCCAGAAGGATCAAGAACGGAAAGCCCTCATCGA CATCAGAAACACCGCAGACACAACCATCTACAGCATAGAGAAAAGTCTGGGTGAGTACAG GGACAAGATACCTGCAGAGGTTGCCTCCGAGATCGAGACGGCGATTGCCGATCTCCGCAA TGAGATGGCCTCGGATGACATTGAGAAGATAAAGAGCAAGATCGAAGCGGCCAACAAGGC TGTCTCAAAGATTGGGCAACACATGTCTGGTGGTGGGTCTGGTGGCTCGCAAGCAGGATC ACAGGGCGGAGGTGACCAGGCTCCTGAGGCTGAGTATGAGGAGGTCAAGAAGTGAAATTG ACCGTTGCCCTGCATTTAGGAGTAGTAGTAGCTAATTTTGTAAGAACTTCGAGATGCTAG AGCTGTGCACGGTGTAATAATGTTCTGGGGATTTTGTTCTCCTATGACACGTCTTCAATT CCCAAGGGCGTCCAATAGTGATGTACTCCTATAACTTTGGTTGCATGTGTTCCCTTGCTC GAGAGGAACATGGGCAACACAAGCTGGGCGTGATCCTCTACTCCTGTTAACTTGGATATC TTGTTCCTCTAATTCTGTATGTAAATTGCACTATCGACCTGGGTTTCAATGAAGCGGCGG GGTCGTTAGTTCTGTGTTTCCATG