Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0112900-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:726370:728004:-1 gene:Os03g0112900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ferulate-5-hydroxylase 2, ferulate 5-hydroxylase-like 2 description:Similar to Aldehyde 5-hydroxylase. (Os03t0112900-00)
Sequence	ATGGCGAACGGCGTGGCAGAGTACTTGCTGATGGACCCGTGGCTTGTTCTATGGCTCGTC CTGGCCTCCATGGCGTTCGCATTGCTGCACCTGCGGCGGCGCGCACGCCGTGGGGCGCCG CCGCTGCCGCCGGGTCCGCGGCCGCTGCCGATCATCGGAAACATGCTCATGATGGACCAG CTGACGCACCGCGGGCTGGCGGCCATGGCGGCCAGGTACGGCGGGTTGCTGCACCTCCGC CTCGGCCGCGTCCACATGGTGGTGGTGTCGAGCCCGGAGCACGCGCGCGAGGTGCTCCAG GTCCAGGACGGCGACTTCTCCAACCGGCCGGCGAGCATCGCCATCGCCTACCTCACCTAC GGCCGCGCCGACATGGCCTTCTCCCACTACGGCCACTTCTGGCGACAGGTGCGCAAGCTC AGCGCCGTGCGGCTCTTCAGCCGGCGGCGCGCCCAGTCGTGGCGCGCCGTCCGCGACGAG TCGGCCAAGCTGGTCGGCGCCATTGCCAGGAGAGCCGGCGAGGCCGTCGACCTCGGTGAG CTCATCTTCGGGCTCACCAAGGACGTCATCTTTCGCGCCGCCTTCGGCACGCGCGACGGC GGCGGCCACGGCGAGCTGGAGGTTCTCCTGCAGGAGTTCTCCAAGCTGTTCGGCGCGTTC AACGTCGGGGACTTCATCCCCTGGCTCGCGTGGCTCGACCCGCACGGCATCAACCGACGG CTCCGCGCGGCGCGCGCCGCCCTCGACAGCGTCATCGACAGGATCATCGACGAGCACGTC AGCAACCCCGCCGGCGACGAGGACGCCGACATGGTGGACGACATGCTCGCGTTCCTCGAC GAGGCCGGACGAGACCAAACCGGCGGCGGCGGCGAGCTGCAGGGCACGCTCCGGCTGACG CGCGACAACATCAAGGCCATCATAATGGACTTCGTCTTCGGCGGGACGGAGACGGTGGCG TCGGCGATCGAGTGGGCGATGGCGGAGTTGCTGCACAGCCCCGGCGATCTCCGGCGGCTG CAGGCGGAGCTCGCCGACGTGGTGGGGCTCGGGCGCGGCGTGGAGGAGGGCGACCTGGAG AAGCTCCCCTTCCTCAGGTGCGTCGCCATGGAGACGCTGCGTCTCCACCCGCCGATCCCG CTGCTCCTCCACGAGGCGGCGGCGGACTGCGTCGTCGGCGGGTACTCCGTGCCGAGGGGC GCCCGCGTGGTGGTCAACGTGTGGAGCGTCGGCCGCGACGCCGGCGCGTGGAAGGGCGAC GCCGGCGCGTTCCGGCCGGCGAGGTTCATGGCGGGCGGCGAGGCGGCGGGGATGGACCTC AGGGGCGGATGCTTCGAGCTCCTGCCGTTCGGGTCGGGGCGGAGGGCGTGCCCCGCCATC GTGCTCGGGATGTACGAGCTGGAGCTCGTCGTCGCGCGCCTCGTCCACGCGTTCGGGTGG GCGCCGCCGGGCGGCGTGGCGCCGGAGGAGCTCGACATGGCGGACGGCTTCGGCCTCACC GCGCCGCGCGCCGCGAGGCTCCGCGCCGTGCCGACGCCCCGGCTCACCTGCCCGATGTGA

Peptide Sequence

PEP ID	Os03t0112900-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:726370:728004:-1 gene:Os03g0112900 transcript:Os03t0112900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ferulate-5-hydroxylase 2, ferulate 5-hydroxylase-like 2 description:Similar to Aldehyde 5-hydroxylase. (Os03t0112900-00)
Sequence	MANGVAEYLLMDPWLVLWLVLASMAFALLHLRRRARRGAPPLPPGPRPLPIIGNMLMMDQ LTHRGLAAMAARYGGLLHLRLGRVHMVVVSSPEHAREVLQVQDGDFSNRPASIAIAYLTY GRADMAFSHYGHFWRQVRKLSAVRLFSRRRAQSWRAVRDESAKLVGAIARRAGEAVDLGE LIFGLTKDVIFRAAFGTRDGGGHGELEVLLQEFSKLFGAFNVGDFIPWLAWLDPHGINRR LRAARAALDSVIDRIIDEHVSNPAGDEDADMVDDMLAFLDEAGRDQTGGGGELQGTLRLT RDNIKAIIMDFVFGGTETVASAIEWAMAELLHSPGDLRRLQAELADVVGLGRGVEEGDLE KLPFLRCVAMETLRLHPPIPLLLHEAAADCVVGGYSVPRGARVVVNVWSVGRDAGAWKGD AGAFRPARFMAGGEAAGMDLRGGCFELLPFGSGRRACPAIVLGMYELELVVARLVHAFGW APPGGVAPEELDMADGFGLTAPRAARLRAVPTPRLTCPM

Transcript Sequence

Transcript ID	Os03t0112900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:726370:728004:-1 gene:Os03g0112900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ferulate-5-hydroxylase 2, ferulate 5-hydroxylase-like 2 description:Similar to Aldehyde 5-hydroxylase. (Os03t0112900-00)
Sequence	ATGGCGAACGGCGTGGCAGAGTACTTGCTGATGGACCCGTGGCTTGTTCTATGGCTCGTC CTGGCCTCCATGGCGTTCGCATTGCTGCACCTGCGGCGGCGCGCACGCCGTGGGGCGCCG CCGCTGCCGCCGGGTCCGCGGCCGCTGCCGATCATCGGAAACATGCTCATGATGGACCAG CTGACGCACCGCGGGCTGGCGGCCATGGCGGCCAGGTACGGCGGGTTGCTGCACCTCCGC CTCGGCCGCGTCCACATGGTGGTGGTGTCGAGCCCGGAGCACGCGCGCGAGGTGCTCCAG GTCCAGGACGGCGACTTCTCCAACCGGCCGGCGAGCATCGCCATCGCCTACCTCACCTAC GGCCGCGCCGACATGGCCTTCTCCCACTACGGCCACTTCTGGCGACAGGTGCGCAAGCTC AGCGCCGTGCGGCTCTTCAGCCGGCGGCGCGCCCAGTCGTGGCGCGCCGTCCGCGACGAG TCGGCCAAGCTGGTCGGCGCCATTGCCAGGAGAGCCGGCGAGGCCGTCGACCTCGGTGAG CTCATCTTCGGGCTCACCAAGGACGTCATCTTTCGCGCCGCCTTCGGCACGCGCGACGGC GGCGGCCACGGCGAGCTGGAGGTTCTCCTGCAGGAGTTCTCCAAGCTGTTCGGCGCGTTC AACGTCGGGGACTTCATCCCCTGGCTCGCGTGGCTCGACCCGCACGGCATCAACCGACGG CTCCGCGCGGCGCGCGCCGCCCTCGACAGCGTCATCGACAGGATCATCGACGAGCACGTC AGCAACCCCGCCGGCGACGAGGACGCCGACATGGTGGACGACATGCTCGCGTTCCTCGAC GAGGCCGGACGAGACCAAACCGGCGGCGGCGGCGAGCTGCAGGGCACGCTCCGGCTGACG CGCGACAACATCAAGGCCATCATAATGGACTTCGTCTTCGGCGGGACGGAGACGGTGGCG TCGGCGATCGAGTGGGCGATGGCGGAGTTGCTGCACAGCCCCGGCGATCTCCGGCGGCTG CAGGCGGAGCTCGCCGACGTGGTGGGGCTCGGGCGCGGCGTGGAGGAGGGCGACCTGGAG AAGCTCCCCTTCCTCAGGTGCGTCGCCATGGAGACGCTGCGTCTCCACCCGCCGATCCCG CTGCTCCTCCACGAGGCGGCGGCGGACTGCGTCGTCGGCGGGTACTCCGTGCCGAGGGGC GCCCGCGTGGTGGTCAACGTGTGGAGCGTCGGCCGCGACGCCGGCGCGTGGAAGGGCGAC GCCGGCGCGTTCCGGCCGGCGAGGTTCATGGCGGGCGGCGAGGCGGCGGGGATGGACCTC AGGGGCGGATGCTTCGAGCTCCTGCCGTTCGGGTCGGGGCGGAGGGCGTGCCCCGCCATC GTGCTCGGGATGTACGAGCTGGAGCTCGTCGTCGCGCGCCTCGTCCACGCGTTCGGGTGG GCGCCGCCGGGCGGCGTGGCGCCGGAGGAGCTCGACATGGCGGACGGCTTCGGCCTCACC GCGCCGCGCGCCGCGAGGCTCCGCGCCGTGCCGACGCCCCGGCTCACCTGCCCGATGTGA