Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0111800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:674687:681881:1 gene:Os03g0111800 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40/YVTN repeat-like domain containing protein. (Os03t0111800-01)
Sequence	ATGGCCGCCGGCGACCACCTGCGGCCGGGCTCCTACCTCGGCGACGTCTCCGCGCTCTCC TTCCTCCCCTCCTCCCCCCGCCCTCTTCTCCTCGCCGGCACCGGATCGGAGCTGCTCGTC TACGACGTCGACGCCGCCAGGCTTGTCGCCTCCTTCCAAGTGTTCGACGGCGTCCGCGTC CACGGCATCCAGCCCCGCTGCCCGGACGGCCCGTCTCCTGGCGATGTCACCGTGTTGGTG TTCGGTGAGAGGAGGGTGAAGATTTTCAGGATTCGCGCCGACTTCGAGGATGGCGAAGCG TGCGGCGTGCGGTTGGAGTTGGAGCAGAGGCTCCCCGGATTTGATCACTGGGTGCTGGAC GCCTGCTTCCTGGAGGCTGATGGGCTGCTCGCGATCGGTTTGAGTGACAATTCAGTGGCA TTATGGGATTTGAGCCAGCGTGTGTTGCATGCCCGAGTGAAATCGCCAGAGAAGTGCCTA CTGTATTCGATGAGAATGTGGGGAAACTCTCTTGAATCTCTTCTCGTGGCTTCTGGAACA ATTTTAAATGAGATTCTTATTTGGAAAATTGTACCCCGAGCTCTGGAAAAATCCTTGTTA TGCTCATATAAGAGCAACACTCTCGGTGTAGAGGACTATGAGAATATGCATATTAGTGAT AAGCAATATATAACAATTCATCTTGGAAGGTTAAAGGAACATGAAGGTTCAATATTTAGA ATAGCTTGGTCCTCTGATGGATCAAAGTTCATGTCTGTTTCCGATGACCGTAGTGCTCGC ATCTGGATGTTGAGTTCTCAGTCACAGAACTTTGTCAATAAGGCAGATGGACAAAATGAT GTTCAGATTATACCGAAACTCACACTTTTTGGGCATAGTGCTAGAATATGGGATTGCTAT GTATCTAATTCTTTAGTTATTACAGTCGGCGAGGATTGTTCTTGTTGCATCTGGGCTATG GACGGAAAGCTAATCAAGAAGTTCAGGGAACACATCGGCCGAGGAATATGGCGGTGTTTA TATGATCCAAGCACACTACTGCTTGCCACTGCTGGGTTTGATTCAGCCATCAAAGTGCAC CATCTTTATAACTCATCTTGTCATGACAAAATGGAAGACAAGGTGGTCTCAGACGATGTC AATTATGATTCTGAGGTCTTTTCAATATCATCCCCTACAGTGTCAGGACAGTATGGGCCC ATGGACAGCAAAAGTGAGTATGTACGATACCTACACTTTGTAAAAGAAAATGATCTCTAT GTTGCCACAAACAATGGATATCTGCATCATGCTGAGCTCTCTAATTCCAACAATGTAAGA TGGACCAAGGTTACTCAAGTTGCTGAGGTGGCACCGATTATTTGCATGGATGTTATGGTA ATGCACTCAGATATTTCACTGAATAGGGATGATATCATTGCCCTTGGAGATGGACGTGGA AATGTTACTGTTGTCCATTTAACTGCCTGTGATCTTGGACCTAAAGTGAATTCATCTTTT ACCTGGCCAGCAGAAAAAGATAGGCAGCTACTAGGAGTATACTGGTGCAAATCTCTTGAA TGTAGACACATTTTCACAGCTGATCCTAGAGGTGTGCTTAAGTTATGGGACATAAGGAAT GCCCTTTTTTCAAATACCCTTGATATCACTACATCTCAGAAGGTTCCTCTTATTGCTGTG TTTGAATCTTCCTTTGGGGCAAGAATCATGTGCTTAGATGCGTTTCCTCAGGACGAGGTC CTTGTAGCTGGTGATAAGAAGGGTAACATAACTGCCTTTCATTTCCCTAAAGTACTGGTA GAACATGAGAGCTGTGGGACGCAACAGAATATGCCTTCATGTGATCGTTTTAAAGGAGCT CATGGAATTTCTAGTGTCACAAGTGTTCGTATAATTACCTCAACTTCTGATCATCTTCAA ATTCACACCACAGGGGGAGACGGTTGCATTTGCTTTTTCAAGTATGACAGAAATGTGCAA AAGATTGAATTTTTTGGAATGAGACAAGTAAAAGAGTTGGGCACCGTTCAATCCATCTTT CCTCCTCATGCCTCAGAAAAGCAATTGCTTAGCACCTATGCAATAGGTTTCACTTCTGCC GATTTTATCATTTGGGACCTTGAAAATGAAACAAAGCTGCTTCAAATATCCTGTGGAGGG TGGCGCCGTCCTTATTCATATTATCTTGGCATGGTCCCTGAGTATCAGAATTGTTTTGCC TTTGTTAAGGATCATAACATTCACATTCATAGGCACTGGGCACCATGTCAAGACAAGAAA TTGCTTCCTCAAGTTTTCCATATGCAGTTCCATGGAAGAGAAGTGCACTCTTTGTGCTTC ATAGATCCAGCAGGCTATTCAAATCCTGAGAAGAGCTCAAATCTGTATATTGCAACAGGA TGTGAAGATGGAACCATGCGACTTACAGGGAACTCAATTAATAGTGCTGGAAAATGGTGT TCCTCCAAGCTGCTGGGGGAGCATGTTGGTGGATCAGCTGTGAGAGCGACATGCTTCGTG CAGAAGGGCTACACATCGTTAGATAAATCATGTAACATCATCCCCAATGGCAACTCTGAT GACACTTTAGTCAAAAACAAGGATAACATTTCCTTATTAATATCCGTTGGATCAAAGCAA GTCCTGACTACTTGGGTTTTACAGCCTAAGGTTGCAGAAAATAGACATATCTGTTCTAGT GGCTTAGATGTAGACTCCAAGCAAAGCTTGAAAGGTGATTCAGCCATGACATTTCAATGG CTTTCTACCCACATGCCTCCAAAGCTTACCAATAGGTTGAAAACTGGCAATGTAAAAAAT AATAATGAGGAAGGGGATTCCTCTATGATGCAACCCAACCAGTTTATTGTGGATCAGCTG GAAAATGACTGGCGTTATCTTTCGGTTACAGCATTTCTTTTGGAACATCCTTCCACCAAT TCGACAGTGTGTTTTGTTGTTGCTGCTTGCTCTGACGCTACAGTCGTGCTCCGTGCTCTT CTTTTGCCTTCTAGGCTATGGTTTGATGTTGCCTTGTTGGCTCCACAGGGATCACCAGTT CTGGTGCTCAAGCATATTATTGCTGCAGCTAGTGTCAACTGCAAAGACACCGCAGACCAT GGAGATACATACATTGTTGTGAGTGGATCTACAGATGGTAGCATTACTTTCTGGGACCTT ACAGATACTATTCATGGATTTATGCAACTAGTATCAGAGACTCAACCACACATGGTTATT GATTGCCAAAAGCGGCCCAGAACAGGAAGAGGAAGTCAAGGCGGTCGGCGCAGGTGGAGA ACACTGCCGGGCCGTTCTTTGAAAAAGATAAATAAAGAGACATCGATCCCTGATGGGAGC ATCCCGAATACTCCAAATGCCACTGAAAATACATCTGAAACTTCTAATGTGGAAGAAACT GATGCCACAAACCAGAACTATGCATTCTCAAATTTGCAATCGTGTAATATACCTGAAGTG ACACCAATGCACAGATTCTCCGGTGTTCACCAGTCAGGCGTCAACTGCCTCCATGTCTCA GAGATGAGGGCTTGCTCGTACTCGACACCTGGCATGTCTTACTGTGTCATAAGCGGTGGG GATGATCAAGCTGTTCACTGTTTCAGTTTTACATTAGGATCTCTTCAGGATTGCGCAATA AATACAAGCCTAGACTCACCTGACAATGGTGCAGTTAAAATTATTTGTCAACATAGGGTT CCTTCTGCCCACAGTTCAGCAGTTAAAGGCATCTGGACGGATGGCATATGGGCTTTCTCT ACTGGCCTTGATCAAAGAGTAAGATGTTGGAAGATGGAGTCATCTGGCAAATTCACTGAG TATTCCCATGCTATCATCAGCGTACCTGAGCCAGAAACTTTGGATGTTGTACATGACCGT GCAGAGAGGAAATACTGGGTTGCTGTTGCTGGAAGGGGAATGCAAATGGTTGAGTTCTTG TCAGCAGAAAATGACGAGGAAGAAATATCAAAATGA

Peptide Sequence

PEP ID	Os03t0111800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:674687:681881:1 gene:Os03g0111800 transcript:Os03t0111800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40/YVTN repeat-like domain containing protein. (Os03t0111800-01)
Sequence	MAAGDHLRPGSYLGDVSALSFLPSSPRPLLLAGTGSELLVYDVDAARLVASFQVFDGVRV HGIQPRCPDGPSPGDVTVLVFGERRVKIFRIRADFEDGEACGVRLELEQRLPGFDHWVLD ACFLEADGLLAIGLSDNSVALWDLSQRVLHARVKSPEKCLLYSMRMWGNSLESLLVASGT ILNEILIWKIVPRALEKSLLCSYKSNTLGVEDYENMHISDKQYITIHLGRLKEHEGSIFR IAWSSDGSKFMSVSDDRSARIWMLSSQSQNFVNKADGQNDVQIIPKLTLFGHSARIWDCY VSNSLVITVGEDCSCCIWAMDGKLIKKFREHIGRGIWRCLYDPSTLLLATAGFDSAIKVH HLYNSSCHDKMEDKVVSDDVNYDSEVFSISSPTVSGQYGPMDSKSEYVRYLHFVKENDLY VATNNGYLHHAELSNSNNVRWTKVTQVAEVAPIICMDVMVMHSDISLNRDDIIALGDGRG NVTVVHLTACDLGPKVNSSFTWPAEKDRQLLGVYWCKSLECRHIFTADPRGVLKLWDIRN ALFSNTLDITTSQKVPLIAVFESSFGARIMCLDAFPQDEVLVAGDKKGNITAFHFPKVLV EHESCGTQQNMPSCDRFKGAHGISSVTSVRIITSTSDHLQIHTTGGDGCICFFKYDRNVQ KIEFFGMRQVKELGTVQSIFPPHASEKQLLSTYAIGFTSADFIIWDLENETKLLQISCGG WRRPYSYYLGMVPEYQNCFAFVKDHNIHIHRHWAPCQDKKLLPQVFHMQFHGREVHSLCF IDPAGYSNPEKSSNLYIATGCEDGTMRLTGNSINSAGKWCSSKLLGEHVGGSAVRATCFV QKGYTSLDKSCNIIPNGNSDDTLVKNKDNISLLISVGSKQVLTTWVLQPKVAENRHICSS GLDVDSKQSLKGDSAMTFQWLSTHMPPKLTNRLKTGNVKNNNEEGDSSMMQPNQFIVDQL ENDWRYLSVTAFLLEHPSTNSTVCFVVAACSDATVVLRALLLPSRLWFDVALLAPQGSPV LVLKHIIAAASVNCKDTADHGDTYIVVSGSTDGSITFWDLTDTIHGFMQLVSETQPHMVI DCQKRPRTGRGSQGGRRRWRTLPGRSLKKINKETSIPDGSIPNTPNATENTSETSNVEET DATNQNYAFSNLQSCNIPEVTPMHRFSGVHQSGVNCLHVSEMRACSYSTPGMSYCVISGG DDQAVHCFSFTLGSLQDCAINTSLDSPDNGAVKIICQHRVPSAHSSAVKGIWTDGIWAFS TGLDQRVRCWKMESSGKFTEYSHAIISVPEPETLDVVHDRAERKYWVAVAGRGMQMVEFL SAENDEEEISK

Transcript Sequence

Transcript ID	Os03t0111800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:674687:681881:1 gene:Os03g0111800 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40/YVTN repeat-like domain containing protein. (Os03t0111800-01)
Sequence	CTCCTCCCCATGGCCGCCGGCGACCACCTGCGGCCGGGCTCCTACCTCGGCGACGTCTCC GCGCTCTCCTTCCTCCCCTCCTCCCCCCGCCCTCTTCTCCTCGCCGGCACCGGATCGGAG CTGCTCGTCTACGACGTCGACGCCGCCAGGCTTGTCGCCTCCTTCCAAGTGTTCGACGGC GTCCGCGTCCACGGCATCCAGCCCCGCTGCCCGGACGGCCCGTCTCCTGGCGATGTCACC GTGTTGGTGTTCGGTGAGAGGAGGGTGAAGATTTTCAGGATTCGCGCCGACTTCGAGGAT GGCGAAGCGTGCGGCGTGCGGTTGGAGTTGGAGCAGAGGCTCCCCGGATTTGATCACTGG GTGCTGGACGCCTGCTTCCTGGAGGCTGATGGGCTGCTCGCGATCGGTTTGAGTGACAAT TCAGTGGCATTATGGGATTTGAGCCAGCGTGTGTTGCATGCCCGAGTGAAATCGCCAGAG AAGTGCCTACTGTATTCGATGAGAATGTGGGGAAACTCTCTTGAATCTCTTCTCGTGGCT TCTGGAACAATTTTAAATGAGATTCTTATTTGGAAAATTGTACCCCGAGCTCTGGAAAAA TCCTTGTTATGCTCATATAAGAGCAACACTCTCGGTGTAGAGGACTATGAGAATATGCAT ATTAGTGATAAGCAATATATAACAATTCATCTTGGAAGGTTAAAGGAACATGAAGGTTCA ATATTTAGAATAGCTTGGTCCTCTGATGGATCAAAGTTCATGTCTGTTTCCGATGACCGT AGTGCTCGCATCTGGATGTTGAGTTCTCAGTCACAGAACTTTGTCAATAAGGCAGATGGA CAAAATGATGTTCAGATTATACCGAAACTCACACTTTTTGGGCATAGTGCTAGAATATGG GATTGCTATGTATCTAATTCTTTAGTTATTACAGTCGGCGAGGATTGTTCTTGTTGCATC TGGGCTATGGACGGAAAGCTAATCAAGAAGTTCAGGGAACACATCGGCCGAGGAATATGG CGGTGTTTATATGATCCAAGCACACTACTGCTTGCCACTGCTGGGTTTGATTCAGCCATC AAAGTGCACCATCTTTATAACTCATCTTGTCATGACAAAATGGAAGACAAGGTGGTCTCA GACGATGTCAATTATGATTCTGAGGTCTTTTCAATATCATCCCCTACAGTGTCAGGACAG TATGGGCCCATGGACAGCAAAAGTGAGTATGTACGATACCTACACTTTGTAAAAGAAAAT GATCTCTATGTTGCCACAAACAATGGATATCTGCATCATGCTGAGCTCTCTAATTCCAAC AATGTAAGATGGACCAAGGTTACTCAAGTTGCTGAGGTGGCACCGATTATTTGCATGGAT GTTATGGTAATGCACTCAGATATTTCACTGAATAGGGATGATATCATTGCCCTTGGAGAT GGACGTGGAAATGTTACTGTTGTCCATTTAACTGCCTGTGATCTTGGACCTAAAGTGAAT TCATCTTTTACCTGGCCAGCAGAAAAAGATAGGCAGCTACTAGGAGTATACTGGTGCAAA TCTCTTGAATGTAGACACATTTTCACAGCTGATCCTAGAGGTGTGCTTAAGTTATGGGAC ATAAGGAATGCCCTTTTTTCAAATACCCTTGATATCACTACATCTCAGAAGGTTCCTCTT ATTGCTGTGTTTGAATCTTCCTTTGGGGCAAGAATCATGTGCTTAGATGCGTTTCCTCAG GACGAGGTCCTTGTAGCTGGTGATAAGAAGGGTAACATAACTGCCTTTCATTTCCCTAAA GTACTGGTAGAACATGAGAGCTGTGGGACGCAACAGAATATGCCTTCATGTGATCGTTTT AAAGGAGCTCATGGAATTTCTAGTGTCACAAGTGTTCGTATAATTACCTCAACTTCTGAT CATCTTCAAATTCACACCACAGGGGGAGACGGTTGCATTTGCTTTTTCAAGTATGACAGA AATGTGCAAAAGATTGAATTTTTTGGAATGAGACAAGTAAAAGAGTTGGGCACCGTTCAA TCCATCTTTCCTCCTCATGCCTCAGAAAAGCAATTGCTTAGCACCTATGCAATAGGTTTC ACTTCTGCCGATTTTATCATTTGGGACCTTGAAAATGAAACAAAGCTGCTTCAAATATCC TGTGGAGGGTGGCGCCGTCCTTATTCATATTATCTTGGCATGGTCCCTGAGTATCAGAAT TGTTTTGCCTTTGTTAAGGATCATAACATTCACATTCATAGGCACTGGGCACCATGTCAA GACAAGAAATTGCTTCCTCAAGTTTTCCATATGCAGTTCCATGGAAGAGAAGTGCACTCT TTGTGCTTCATAGATCCAGCAGGCTATTCAAATCCTGAGAAGAGCTCAAATCTGTATATT GCAACAGGATGTGAAGATGGAACCATGCGACTTACAGGGAACTCAATTAATAGTGCTGGA AAATGGTGTTCCTCCAAGCTGCTGGGGGAGCATGTTGGTGGATCAGCTGTGAGAGCGACA TGCTTCGTGCAGAAGGGCTACACATCGTTAGATAAATCATGTAACATCATCCCCAATGGC AACTCTGATGACACTTTAGTCAAAAACAAGGATAACATTTCCTTATTAATATCCGTTGGA TCAAAGCAAGTCCTGACTACTTGGGTTTTACAGCCTAAGGTTGCAGAAAATAGACATATC TGTTCTAGTGGCTTAGATGTAGACTCCAAGCAAAGCTTGAAAGGTGATTCAGCCATGACA TTTCAATGGCTTTCTACCCACATGCCTCCAAAGCTTACCAATAGGTTGAAAACTGGCAAT GTAAAAAATAATAATGAGGAAGGGGATTCCTCTATGATGCAACCCAACCAGTTTATTGTG GATCAGCTGGAAAATGACTGGCGTTATCTTTCGGTTACAGCATTTCTTTTGGAACATCCT TCCACCAATTCGACAGTGTGTTTTGTTGTTGCTGCTTGCTCTGACGCTACAGTCGTGCTC CGTGCTCTTCTTTTGCCTTCTAGGCTATGGTTTGATGTTGCCTTGTTGGCTCCACAGGGA TCACCAGTTCTGGTGCTCAAGCATATTATTGCTGCAGCTAGTGTCAACTGCAAAGACACC GCAGACCATGGAGATACATACATTGTTGTGAGTGGATCTACAGATGGTAGCATTACTTTC TGGGACCTTACAGATACTATTCATGGATTTATGCAACTAGTATCAGAGACTCAACCACAC ATGGTTATTGATTGCCAAAAGCGGCCCAGAACAGGAAGAGGAAGTCAAGGCGGTCGGCGC AGGTGGAGAACACTGCCGGGCCGTTCTTTGAAAAAGATAAATAAAGAGACATCGATCCCT GATGGGAGCATCCCGAATACTCCAAATGCCACTGAAAATACATCTGAAACTTCTAATGTG GAAGAAACTGATGCCACAAACCAGAACTATGCATTCTCAAATTTGCAATCGTGTAATATA CCTGAAGTGACACCAATGCACAGATTCTCCGGTGTTCACCAGTCAGGCGTCAACTGCCTC CATGTCTCAGAGATGAGGGCTTGCTCGTACTCGACACCTGGCATGTCTTACTGTGTCATA AGCGGTGGGGATGATCAAGCTGTTCACTGTTTCAGTTTTACATTAGGATCTCTTCAGGAT TGCGCAATAAATACAAGCCTAGACTCACCTGACAATGGTGCAGTTAAAATTATTTGTCAA CATAGGGTTCCTTCTGCCCACAGTTCAGCAGTTAAAGGCATCTGGACGGATGGCATATGG GCTTTCTCTACTGGCCTTGATCAAAGAGTAAGATGTTGGAAGATGGAGTCATCTGGCAAA TTCACTGAGTATTCCCATGCTATCATCAGCGTACCTGAGCCAGAAACTTTGGATGTTGTA CATGACCGTGCAGAGAGGAAATACTGGGTTGCTGTTGCTGGAAGGGGAATGCAAATGGTT GAGTTCTTGTCAGCAGAAAATGACGAGGAAGAAATATCAAAATGACTCTTTTTTTTAGAT GAGATGTTAGTTCATTTGGTGTGAAACAGGATGCCCACCAGAGAACTGGAATTTTATGTG GACTTCTGCAACTTGATCAAAACTTTGAAATATGTCAGGCAGAACGTACACAGCATGCCG ACCAGGTTGGTGCGGGTCTGCTTGAACAACCTCATCGCGCTGATCGAGCAGTGGATTGTG CGAAGTTTAAGCTGTAGTGCTGTACTGATTTCACTCATGGTGGACGGTGACAATGGCAAG TGGAACTGTCCGTCTGTCCGTCCAAGTTGATGAGAGCTTGTCACCTAGTGGATTTTCCTG GCTGGACGAGCAGTGGCGGCGTGTCATGACAACTAGGAAGTATGCAACTAATGACTAACG TGACATGTTTGTTGGTAGGAGTGATTCTGCAATCTCTAACCGACCATGAACCCATGATGT TAACTGGTGAAAGATGACCAGATTCAAGAGTGATTCTGTAGATTCTTGAACCAGCCATGA GGCCGTGATGTTAACTGGTGATAAGTGATCAGATTCAAAAACATTATTTTTAGTATTGTA AAGGGCTTTGAGCTTCATCTAAGGTCCCTTTCTTTCTTTTTGCTGATGCTGTGGCAAACG TTTCTCAATTGTGGTGGCAGATGCTGCACAAGATGGTGTGCTTTGCTTTGGTCCTTCCTG GTCCATTTATTCCGTCAGTCAGGCTTTCAGACTTCAGAAGTTCAGAGACTTCATTTAAAC TGGTGTGCCTCTGTCTAGAATCCTATGTTGACTGGAGTTATATATCTGTCTTGACCGGTC AATGCCCAAATTTTGATTGGTGATGATAAAACTTAAAACAACCCCTTTTTC