Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0111100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:640597:645631:-1 gene:Os03g0111100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase. (Os03t0111100-01)
Sequence

ATGCCTCACCGCCCTCACCTGGCTCAGCTCCGCCGCCTCCTCCTCCTGCCTTGCTCCTCC
GTCCCCGTCCCCGTCCCCGCCCGCCGCCTCTCCTCCCCTCGCGCCATGGCCTCCTCCTCC
GTCTCCGCCGCCGCCGCCGCCGCGCAGGCAGGTGGTGCTGTGGCGGCAGCGGAGTACGAG
GACGTGATGGGGCGGCTCTCCTCGCTCATCACGCAGAAGGTGCGGGCGCACAGCGGCAAC
CGGGGAAACCAGTGGGACCTCATGGCGCATTACCTCCAGATTCTGGAGCTGGAGGAGCCG
ATCGCGCGGATGAAGGTGATTCACGTTGCCGGGACCAAAGGAAAGGGTTCAACATGCACA
TTCACAGAGGCAATCCTGCGATCATGTGGTTTCAGCACAGGGCTGTTCACCTCACCACAT
TTGATGGATGTCAGGGAGCGATTCCGGCTAAATGGGGTGGATATTTCCGAAGAAAAGTTT
TTGAAATACTTCTGGTGGTGCTGGAATAAGCTCAAGGAGAAGACTGATGATGATATTCCC
ATGCCAACCTACTTCAGATTCCTTGCATTGTTAGCATTCAAGATATTCTCAGCTGAACAG
GTTGATGTTGCTGTTCTCGAGGTTGGCCTTGGAGGGAAGTTTGATGCAACTAATGTGGTT
GAAGCACCTGTGGTTTGTGGAATAGCTTCCCTTGGATACGACCATATGGAAATTCTTGGA
AACACACTTGGAGAAATTGCTGGTGAGAAGGCAGGGATTTTCAAGAAGGGAGTTCCGGCC
TACACTGCTCCACAGCCAGAAGAGGCAATGATTGCTCTGAAACAAAGGGCTTCAGAATTG
GGTGTTTCACTCCAAGTTGCACATCCTTTGGAACCCCATCAATTAAAGGATCAACATCTT
GGACTGCGTGGTGAACACCAATATGTAAATGCTGGCCTTGCAGTTGCATTGGCTAGTACA
TGGCTTGAGAAGCAAGGACATGTGGAAAGAATACCACTGAACCGAACTGACCCGTTACCA
GATCAGTTTATTAGTGGGCTGTCAAATGCCTCTTTGCAAGGCCGAGCGCAGATCATTACA
GATTCACAAGTAAACTCAGGAGAGGAAGATAAAGACTGTTCTTTGGTTTTCTATTTGGAT
GGGGCTCACAGTCCTGAAAGTATGGAAATTTGTGCTAGATGGTTTAGCCATGTCACTAAA
GAGGATAGGACAGTACCATCTTCCATGGTGCAGTCTCAGTCTTGTGGCAACTCTCAAAAG
ATTCTTCTATTCAATTGCATGTCCGTGAGGGATCCTATGAGGTTGCTTCCGCATCTTCTG
GATACATCAACTCAAAATGGGGTCCACTTTGAGATGGCTCTTTTTGTGCCAAACCAATCA
CAATACAACAAGCTTGGTACCAATTCATCAGCTCCTGCAGAGCCTGAGCAAATTGATTTG
TCATGGCAATTGTCGCTTCAAAGAGTGTGGCAGAAATTACTTCATGGTGATAAAGGTATG
AACAACACAAATTCCAGTGAGAACAGTCTGGTTTTTGAATCACTTCCACTGGCAATGGAG
TGGCTGAGGACAAATGCCCGACAAAACCGATCAACTTCTTTTCAGGTCCTGGTTACTGGC
TCCCTGCATCTCGTTGGTGATGTGTTGAGATTGGTCAAGAAATGA

Peptide Sequence

PEP ID

Os03t0111100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:640597:645631:-1 gene:Os03g0111100 transcript:Os03t0111100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase. (Os03t0111100-01)
Sequence

MPHRPHLAQLRRLLLLPCSSVPVPVPARRLSSPRAMASSSVSAAAAAAQAGGAVAAAEYE
DVMGRLSSLITQKVRAHSGNRGNQWDLMAHYLQILELEEPIARMKVIHVAGTKGKGSTCT
FTEAILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKFLKYFWWCWNKLKEKTDDDIP
MPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATNVVEAPVVCGIASLGYDHMEILG
NTLGEIAGEKAGIFKKGVPAYTAPQPEEAMIALKQRASELGVSLQVAHPLEPHQLKDQHL
GLRGEHQYVNAGLAVALASTWLEKQGHVERIPLNRTDPLPDQFISGLSNASLQGRAQIIT
DSQVNSGEEDKDCSLVFYLDGAHSPESMEICARWFSHVTKEDRTVPSSMVQSQSCGNSQK
ILLFNCMSVRDPMRLLPHLLDTSTQNGVHFEMALFVPNQSQYNKLGTNSSAPAEPEQIDL
SWQLSLQRVWQKLLHGDKGMNNTNSSENSLVFESLPLAMEWLRTNARQNRSTSFQVLVTG
SLHLVGDVLRLVKK

Transcript Sequence

Transcript ID

Os03t0111100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:640597:645631:-1 gene:Os03g0111100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase. (Os03t0111100-01)
Sequence

ACCAGCCACCACGGCGGCGGCGGCGCCATCACCAACCCACACCCACACCTACTACTACGA
CGACACAAGTAGTGGTCGTCGAATCCGCGGCGGCGCTCGCCTGAGCTTGCGCTGCACCTG
CACGCGGCATATGCCTCACCGCCCTCACCTGGCTCAGCTCCGCCGCCTCCTCCTCCTGCC
TTGCTCCTCCGTCCCCGTCCCCGTCCCCGCCCGCCGCCTCTCCTCCCCTCGCGCCATGGC
CTCCTCCTCCGTCTCCGCCGCCGCCGCCGCCGCGCAGGCAGGTGGTGCTGTGGCGGCAGC
GGAGTACGAGGACGTGATGGGGCGGCTCTCCTCGCTCATCACGCAGAAGGTGCGGGCGCA
CAGCGGCAACCGGGGAAACCAGTGGGACCTCATGGCGCATTACCTCCAGATTCTGGAGCT
GGAGGAGCCGATCGCGCGGATGAAGGTGATTCACGTTGCCGGGACCAAAGGAAAGGGTTC
AACATGCACATTCACAGAGGCAATCCTGCGATCATGTGGTTTCAGCACAGGGCTGTTCAC
CTCACCACATTTGATGGATGTCAGGGAGCGATTCCGGCTAAATGGGGTGGATATTTCCGA
AGAAAAGTTTTTGAAATACTTCTGGTGGTGCTGGAATAAGCTCAAGGAGAAGACTGATGA
TGATATTCCCATGCCAACCTACTTCAGATTCCTTGCATTGTTAGCATTCAAGATATTCTC
AGCTGAACAGGTTGATGTTGCTGTTCTCGAGGTTGGCCTTGGAGGGAAGTTTGATGCAAC
TAATGTGGTTGAAGCACCTGTGGTTTGTGGAATAGCTTCCCTTGGATACGACCATATGGA
AATTCTTGGAAACACACTTGGAGAAATTGCTGGTGAGAAGGCAGGGATTTTCAAGAAGGG
AGTTCCGGCCTACACTGCTCCACAGCCAGAAGAGGCAATGATTGCTCTGAAACAAAGGGC
TTCAGAATTGGGTGTTTCACTCCAAGTTGCACATCCTTTGGAACCCCATCAATTAAAGGA
TCAACATCTTGGACTGCGTGGTGAACACCAATATGTAAATGCTGGCCTTGCAGTTGCATT
GGCTAGTACATGGCTTGAGAAGCAAGGACATGTGGAAAGAATACCACTGAACCGAACTGA
CCCGTTACCAGATCAGTTTATTAGTGGGCTGTCAAATGCCTCTTTGCAAGGCCGAGCGCA
GATCATTACAGATTCACAAGTAAACTCAGGAGAGGAAGATAAAGACTGTTCTTTGGTTTT
CTATTTGGATGGGGCTCACAGTCCTGAAAGTATGGAAATTTGTGCTAGATGGTTTAGCCA
TGTCACTAAAGAGGATAGGACAGTACCATCTTCCATGGTGCAGTCTCAGTCTTGTGGCAA
CTCTCAAAAGATTCTTCTATTCAATTGCATGTCCGTGAGGGATCCTATGAGGTTGCTTCC
GCATCTTCTGGATACATCAACTCAAAATGGGGTCCACTTTGAGATGGCTCTTTTTGTGCC
AAACCAATCACAATACAACAAGCTTGGTACCAATTCATCAGCTCCTGCAGAGCCTGAGCA
AATTGATTTGTCATGGCAATTGTCGCTTCAAAGAGTGTGGCAGAAATTACTTCATGGTGA
TAAAGGTATGAACAACACAAATTCCAGTGAGAACAGTCTGGTTTTTGAATCACTTCCACT
GGCAATGGAGTGGCTGAGGACAAATGCCCGACAAAACCGATCAACTTCTTTTCAGGTCCT
GGTTACTGGCTCCCTGCATCTCGTTGGTGATGTGTTGAGATTGGTCAAGAAATGATACTT
CTTCTTGGAACGATATACACTTAGAAGTTCAAATTGACGCTGAGCCAATTTCGCGGTTTA
CGTTTGAGATCCCCTGACGGCAACCGGGCGGTTACAGGATACAACAATTTCAATTTCAGG
TGTTTTGGATTCTATGCTGACCAGGCAGCGAGCATATCGCGTATACTCTTCTTGTTATGT
GTTTCATGGCTCCTTTTTGCCACTAATCCGTATTCTTTACCCAGAAAACTTCAATGCCCA
TTACAACAAGTAATAAATTGAATACATGAATAAGATGGTGGCAATCATGAATAGGATACA
CTTTTCTAAGCTTCTGGTGAAGATGTTCGATTC