Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0109900-03
CDS Infomation	cds chromosome:IRGSP-1.0:3:574309:578006:-1 gene:Os03g0109900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase, trypsin-like serine and cysteine domain containing protein. (Os03t0109900-01);Hypothetical conserved gene. (Os03t0109900-02);Peptidase cysteine/serine, trypsin-like domain containing protein. (Os03t0109900-03)
Sequence	GGAAGAACTGACTCATTGGCCTCAGGTTGCTTGCATGGGGACCCTAATGAGGATGTCTGG ACTGAGCTCAATGATGTGGTTAAATCTAATTTGTCTAAAAGTGTCGCGTCGCTTAGTTTG CGCAATGGAGACACGGTCTTATTTGCATGCACAGGTGTAGCTGTAGACCGCCAGGGGCGT CTTACAAAGTTCCTCACTTCTGCAAGTTTGGTAGAGCTTTTGGTTAGAGCTCTCAATGAT ACAAACAAAAACCATGGTGACTTAGAGCTCGAAGTGTACCATGAAGGCAATGAAGTATGC CAGGGTTATTTGACTGATTTTGATTTGGATCACAATCTGGCCATCGTCGAAATCTGGACT GACTTTGATGTTCATGTTGGACTTCTCCAACATGCGGTGGAATTTCTGCCCCATTGTAAG GTAATAGCTATAGGGCGTGAAATCACTGGCAAACTGATGGCCAGGAGGGTGCAGTTAATG GATGATTTAAGTGTATCTGAAGATAGTGAAGATCTTGACTGTAAAATCAAAGAGGCTTGG GAAGGTGCACCACTTTTTTCTTTTGATGGGAACTTTGTTGGCATGAACCTTTTTTTGGCT ATGGGAAGAGCCTTTTTCCTGCCATGGGGCACTATTCAGAAGCATTGGGCATCCCTGCAA AACAAGACGGGACTTCCAGAGTCAAACAGTTTGAAGGTTTATAGGTTTGGAACAAGTTCC ACAGCTGAGAAATCTAACAGCCATCCAGAAGTAAACAACGATATTCTCGACCCGGAGCAG ATTCATATAGACTCTATGGGCTATCCAAAGTTTCCAACACACATGTTTGCTGATGGGATG ATTTTGGTTAATACTTTCGAAGAGACTTTCGGCGATCTACGTGGTGAAGGTGTATGGAGT AAACTCAGTAAAAAATCTTGTTCTAACATAGACCGCAGTGTTGTCGCACTAGCTTCATTC AGTGGAGAGAGAAGGTTTTTTGCATGCACAGGCTTTTTTGTTGAATGGAATGGTTCTACA GTTATTTTGACATCAGCAAGCTTGGTTAGAAGTTCTGGCGATGAGAACAAGATTGTTGAC AACTTGAGGGTGATGCTGTTAGTCATCATTGTATCATTTGCAGATTGA

Peptide Sequence

PEP ID	Os03t0109900-03
PEP Infomation	pep chromosome:IRGSP-1.0:3:574309:578006:-1 gene:Os03g0109900 transcript:Os03t0109900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase, trypsin-like serine and cysteine domain containing protein. (Os03t0109900-01);Hypothetical conserved gene. (Os03t0109900-02);Peptidase cysteine/serine, trypsin-like domain containing protein. (Os03t0109900-03)
Sequence	GRTDSLASGCLHGDPNEDVWTELNDVVKSNLSKSVASLSLRNGDTVLFACTGVAVDRQGR LTKFLTSASLVELLVRALNDTNKNHGDLELEVYHEGNEVCQGYLTDFDLDHNLAIVEIWT DFDVHVGLLQHAVEFLPHCKVIAIGREITGKLMARRVQLMDDLSVSEDSEDLDCKIKEAW EGAPLFSFDGNFVGMNLFLAMGRAFFLPWGTIQKHWASLQNKTGLPESNSLKVYRFGTSS TAEKSNSHPEVNNDILDPEQIHIDSMGYPKFPTHMFADGMILVNTFEETFGDLRGEGVWS KLSKKSCSNIDRSVVALASFSGERRFFACTGFFVEWNGSTVILTSASLVRSSGDENKIVD NLRVMLLVIIVSFAD

Transcript Sequence

Transcript ID	Os03t0109900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:574309:578006:-1 gene:Os03g0109900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase, trypsin-like serine and cysteine domain containing protein. (Os03t0109900-01);Hypothetical conserved gene. (Os03t0109900-02);Peptidase cysteine/serine, trypsin-like domain containing protein. (Os03t0109900-03)
Sequence	GTGGAAGAACTGACTCATTGGCCTCAGGTTGCTTGCATGGGGACCCTAATGAGGATGTCT GGACTGAGCTCAATGATGTGGTTAAATCTAATTTGTCTAAAAGTGTCGCGTCGCTTAGTT TGCGCAATGGAGACACGGTCTTATTTGCATGCACAGGTGTAGCTGTAGACCGCCAGGGGC GTCTTACAAAGTTCCTCACTTCTGCAAGTTTGGTAGAGCTTTTGGTTAGAGCTCTCAATG ATACAAACAAAAACCATGGTGACTTAGAGCTCGAAGTGTACCATGAAGGCAATGAAGTAT GCCAGGGTTATTTGACTGATTTTGATTTGGATCACAATCTGGCCATCGTCGAAATCTGGA CTGACTTTGATGTTCATGTTGGACTTCTCCAACATGCGGTGGAATTTCTGCCCCATTGTA AGGTAATAGCTATAGGGCGTGAAATCACTGGCAAACTGATGGCCAGGAGGGTGCAGTTAA TGGATGATTTAAGTGTATCTGAAGATAGTGAAGATCTTGACTGTAAAATCAAAGAGGCTT GGGAAGGTGCACCACTTTTTTCTTTTGATGGGAACTTTGTTGGCATGAACCTTTTTTTGG CTATGGGAAGAGCCTTTTTCCTGCCATGGGGCACTATTCAGAAGCATTGGGCATCCCTGC AAAACAAGACGGGACTTCCAGAGTCAAACAGTTTGAAGGTTTATAGGTTTGGAACAAGTT CCACAGCTGAGAAATCTAACAGCCATCCAGAAGTAAACAACGATATTCTCGACCCGGAGC AGATTCATATAGACTCTATGGGCTATCCAAAGTTTCCAACACACATGTTTGCTGATGGGA TGATTTTGGTTAATACTTTCGAAGAGACTTTCGGCGATCTACGTGGTGAAGGTGTATGGA GTAAACTCAGTAAAAAATCTTGTTCTAACATAGACCGCAGTGTTGTCGCACTAGCTTCAT TCAGTGGAGAGAGAAGGTTTTTTGCATGCACAGGCTTTTTTGTTGAATGGAATGGTTCTA CAGTTATTTTGACATCAGCAAGCTTGGTTAGAAGTTCTGGCGATGAGAACAAGATTGTTG ACAACTTGAGGGTGATGCTGTTAGTCATCATTGTATCATTTGCAGATTGAAGTGTTGCTT CCAAACAAACAACGCGTAGAAGGGATGTTACAGCATTGTAATCTTCATTACAATGTTGCT CTAGTCAGTGTGGGTTACCGTGCTCTTCGCCCAGCACATGGTCAGCTTGATTGGTGGGGC AAGAGTAGTAAGGTAGTGGCTGTAGGGCGTTGCTTCAAGTCAGGTGCATTGATGGCTGCA AGTGGAACGGTAACCCCCTGGACAGGCACACTCGATTGCGACTTCCTCGAACGTTCGTCA TGTAAAATCACAAAGGCTGGGATTGGAGGCCCTGTTGTTACTCTTGATGGGGATTGTATT GGTATGAACTTCTATGATACGAGAATAGGAACCCCTTTCCTGTCGTGGGAGGTGATTGTT GATATTGTAGCATCCTTTGAGGAAAAAAGGTGGCCAGTGCCTATGCCATATTGATGCCAC CCGGACTGTGTGTAGGATGAGTCTGAAGATGATGAAGAGTTGGGGTTTTCATCCACATTT GGCTGCAAGCTGAAGTACAATTACATAAATGGAGAGAAAAGCGTGTTCTTTTAGTTGCTG TTAGATGTAGAAGAAACCTAACCTGAACTTGTTGTCAATCTCACTATATCCTAAAGCCTG AACTTTTATATAGGAAAAACAAGTGAAGCCAGAACTTGTTGTCAATCTCACTATATCCTA AAGCCTGAACTTTTATGTAGG