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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0109600-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:560387:561521:-1 gene:Os03g0109600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BTF3a RNA pol B, BTF3a RNA polymerase B, Transcription factor BTF3a description:Similar to Transcription factor homolog BTF3-like protein. (Os03t0109600-01);Similar to transcription factor BTF3. (Os03t0109600-02);Similar to transcription factor BTF3. (Os03t0109600-03)
Sequence

GCAGTTCACAAGACTACCACCACTGATGACAAGAGGCTTCAAAGCACCTTGAAAAGAGTA
GGAGTGAACAACATTCCTGGTATCGAAGAGGTCAATATCTTCAAGGATGATGTGGTTATC
CAATTTCAGAATCCAAAAGTGCAAGCATCCATTGGTGCAAATACATGGGTAGTGAGTGGA
ACACCACAGACGAAGAAGCTGCAAGATCTGCTTCCAACAATCATCAACCAGTTGGGACCT
GATAACCTGGACAACCTCAGGAGGCTTGCTGAGCAGTTCCAGAAGCAGGTACCCGGTGCT
GAGGCTGGTGCCAGCGCAGGTAACGCTCAGGACGACGACGATGATGTCCCTGAGCTTGTC
CCTGGAGAGACGTTCGAGGAGGCTGCAGAGGAGAAGGAGCCTGAGGAGAAGAAGGAAGCG
GAGGTGGAAGAGAAGAAAGAGTCGTCCTAG

Peptide Sequence

PEP ID

Os03t0109600-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:560387:561521:-1 gene:Os03g0109600 transcript:Os03t0109600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BTF3a RNA pol B, BTF3a RNA polymerase B, Transcription factor BTF3a description:Similar to Transcription factor homolog BTF3-like protein. (Os03t0109600-01);Similar to transcription factor BTF3. (Os03t0109600-02);Similar to transcription factor BTF3. (Os03t0109600-03)
Sequence

AVHKTTTTDDKRLQSTLKRVGVNNIPGIEEVNIFKDDVVIQFQNPKVQASIGANTWVVSG
TPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQVPGAEAGASAGNAQDDDDDVPELV
PGETFEEAAEEKEPEEKKEAEVEEKKESS

Transcript Sequence

Transcript ID

Os03t0109600-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:560387:561521:-1 gene:Os03g0109600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BTF3a RNA pol B, BTF3a RNA polymerase B, Transcription factor BTF3a description:Similar to Transcription factor homolog BTF3-like protein. (Os03t0109600-01);Similar to transcription factor BTF3. (Os03t0109600-02);Similar to transcription factor BTF3. (Os03t0109600-03)
Sequence

GGCAGTTCACAAGACTACCACCACTGATGACAAGAGGCTTCAAAGCACCTTGAAAAGAGT
AGGAGTGAACAACATTCCTGGTATCGAAGAGGTCAATATCTTCAAGGATGATGTGGTTAT
CCAATTTCAGAATCCAAAAGTGCAAGCATCCATTGGTGCAAATACATGGGTAGTGAGTGG
AACACCACAGACGAAGAAGCTGCAAGATCTGCTTCCAACAATCATCAACCAGTTGGGACC
TGATAACCTGGACAACCTCAGGAGGCTTGCTGAGCAGTTCCAGAAGCAGGTACCCGGTGC
TGAGGCTGGTGCCAGCGCAGGTAACGCTCAGGACGACGACGATGATGTCCCTGAGCTTGT
CCCTGGAGAGACGTTCGAGGAGGCTGCAGAGGAGAAGGAGCCTGAGGAGAAGAAGGAAGC
GGAGGTGGAAGAGAAGAAAGAGTCGTCCTAGTTTTGTTCATCGCCGTCGTCTATTATTGT
TGTGAAGGGTTGTTGGTTCAATGTTACCCCCTACCATGCCTGGGACGTGCTCTCCTATGG
ACTCCGACCTGCCTTACTCGTTTCCATGTGGGCCGGTTTTGTCTTGTACGAGGATTTGGT
CCAATCCAACGGTGGAATTGAGTTTTACGACAGTTAAATTATGCTTCC