Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0109400-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:549939:557886:1 gene:Os03g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 10 description:Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-01);Homeodomain-related domain containing protein. (Os03t0109400-02);Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-03)
Sequence	ATGGCTGCGGCAGTGGCAATGCGAGGGAGTAGCAGTGATGGAGGTGGCTATGATAAGGTT TCCGGGATGGACTCCGGTAAATATGTGCGCTACACGCCTGAGCAGGTGGAGGCGCTTGAG CGGGTGTACGCCGATTGCCCCAAGCCAACCTCCTCCCGCAGGCAGCAACTGCTGCGTGAG TGCCCCATACTTGCTAACATTGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACAGAAGG TGCCGGGATAAGCAGCGGAAGGAGTCTTCACGGCTTCAGGCTGTCAACAGGAAATTGACG GCAATGAACAAGCTACTTATGGAAGAGAATGAGCGACTCCAGAAGCAGGTCTCCCAATTG GTTCATGAGAATGCCCACATGCGACAGCAGCTGCAGAATACTCCGCTGGCAAATGATACA AGCTGTGAATCAAATGTGACTACCCCTCAAAACCCTTTAAGGGATGCAAGTAACCCCTCT GGGCTCCTTTCAATTGCAGAGGAGACCTTGACAGAGTTCCTCTCAAAGGCTACTGGTACA GCTATTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGTATTGTG GCCATTTCACATGGTTGCCGTGGTGTTGCTGCCCGTGCCTGTGGTTTGGTGAACCTAGAA CCAACAAAAGTGGTAGAGATATTGAAAGATCGTCCATCTTGGTTCCGTGATTGTCGAAAC CTGGAAGTCTTTACAATGATTCCAGCAGGAAATGGAGGAACGGTTGAACTTGTCTACACA CAGTTGTATGCTCCAACAACTTTAGTTCCTGCACGAGATTTTTGGACGTTACGGTACACA ACCACAATGGAAGATGGCAGTCTTGTGGTCTGTGAGAGATCTTTAAGTGGTTCAGGGGGC GGTCCAAGTGCTGCCTCTGCTCAGCAATATGTGAGAGCGGAAATGCTTCCAAGTGGATAC CTGGTTCGCCCATGTGAAGGTGGGGGATCAATTGTGCACATAGTGGACCATCTGGATCTT GAGGCATGGAGTGTTCCTGAGGTGCTTCGGCCACTCTATGAATCTTCAAGGGTAGTCGCT CAGAAAATGACTACTGCGGCACTCCGGCACATCAGACAAATTGCTCAAGAAACAAGTGGG GAAGTGGTGTATGCCTTGGGGAGGCAACCAGCAGTGCTACGGACTTTTAGTCAAAGGCTG AGCAGAGGCTTTAACGATGCCATTAGTGGTTTCAATGATGATGGGTGGTCTATAATGGGC GGAGACGGTGTTGAAGATGTAGTTATTGCTTGCAACTCAACTAAGAAAATTAGGAGTAAC AGCAATGCTGGCATCGCCTTTGGAGCCCCCGGAGGTATTATATGTGCTAAGGCATCAATG TTACTGCAGAGTGTTCCTCCAGCAGTACTGGTTCGATTTCTGAGGGAGCATAGATCTGAA TGGGCCGATTACAATATTGATGCATATTTGGCTTCAACTCTGAAAACAAGTGCATGTTCA CTTACTGGGTTGCGACCCATGAGATTTTCTGGGAGCCAAATCATCATTCCACTTGCTCAC ACAGTTGAGAATGAGGAGATTCTTGAAGTTGTTCGCCTTGAGGGTCAACCTCTTACTCAT GATGAAGCTCTTCTTTCAAGGGATATCCACCTGCTTCAGCTCTGCACTGGAATAGACGAG AAGTCTGTGGGATCCTCCTTTCAGCTTGTGTTTGCACCGATTGATGATTTCCCAGATGAA ACTCCATTGATTTCTTCTGGCTTCCGTGTTATACCACTTGATATGAAAACAGATGGTGCA TCCTCTGGTAGGACATTAGATTTGGCATCTAGTCTTGAAGTAGGTTCAGCAACAGCTCAA GCCTCCGGAGATGCATCTGCAGATGATTGTAACTTGCGATCTGTTCTGACGATCGCTTTT CAATTCCCTTACGAGTTGCATCTCCAAGACAGTGTTGCAGCTATGGCTCGCCAATATGTC CGTAGCATTGTTTCTGCTGTGCAAAGAGTGTCAATGGCTATCTCTCCCTCTCAAACTGGT CTAAATGCCGGACAGAGGATAATCTCTGGTTTCCCTGAAGCAGCAACCCTTGCTCGATGG GTTTGCCAGAGCTACCATTACCATCTAGGGGTAGAGTTACTTAGTCAATCAGATGGAGAT GCAGAACAATTGTTGAAGATGCTATGGCATTACCAAGATGCTATTTTGTGCTGCTCATTC AAGGAAAAACCGGTGTTTACATTTGCCAACAAAGCAGGACTGGACATGCTAGAAACTTCC CTTGTCGCCTTACAGGACCTCACATTGGACAGGATCTTTGATGAGCCTGGAAAAGAAGCA TTGTTCTCAAACATTCCCAAATTGATGGAGCAGGGCCATGTCTACCTGCCATCAGGCGTG TGCATGTCAGGAATGGGTCGGCATGTTTCTTTCGATCAGGCCGTGGCTTGGAAAGTGCTT GCCGAGGATAGCAATGTTCACTGCCTGGCCTTCTGTTTCGTCAACTGGTCCTTTGTGTGA

Peptide Sequence

PEP ID	Os03t0109400-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:549939:557886:1 gene:Os03g0109400 transcript:Os03t0109400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 10 description:Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-01);Homeodomain-related domain containing protein. (Os03t0109400-02);Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-03)
Sequence	MAAAVAMRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRE CPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQL VHENAHMRQQLQNTPLANDTSCESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKATGT AIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRN LEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGG GPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVA QKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMG GDGVEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHRSE WADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTH DEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDDFPDETPLISSGFRVIPLDMKTDGA SSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAMARQYV RSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGD AEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEA LFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV

Transcript Sequence

Transcript ID	Os03t0109400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:549939:557886:1 gene:Os03g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 10 description:Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-01);Homeodomain-related domain containing protein. (Os03t0109400-02);Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-03)
Sequence	CTCTCTCCCGTGCTGCTCTCCCTTCTCCTCTCCTCAATTACCACGCCGCAGCCGCAGCCC CCCAACCCTAGCTAGTACGGCGGGCGACCTGAGGGGGTAGCTGCCTACCTCTATACCTGC TATCTCCGTTCGATCCGGGTCGGGCTCGTGCTGCTGGGGGCGGGGGCAATCAATCGGCGA GCTCGGTGATCCATGGCCGTGGCTGTGGGGTGGCTGTGAGGGTGCCCCCGGCGGCGCTCC CCTCCGCGCCTGCCGGCGAGGGGGCTCGGACTGAAGGGATCTAGGCGAGCTGAAAATTGA AGTGCAGGCAAGGAGATAAGAGCAGCGTCCAAATTGTGAGTACTTCATTAGCAGGAGGTA GTGGTTGTGCTTGCTTGGCTCCTTTGCAATTTGGCTTTGGCGAGGTAGCAATGGCTGCGG CAGTGGCAATGCGAGGGAGTAGCAGTGATGGAGGTGGCTATGATAAGGTTTCCGGGATGG ACTCCGGTAAATATGTGCGCTACACGCCTGAGCAGGTGGAGGCGCTTGAGCGGGTGTACG CCGATTGCCCCAAGCCAACCTCCTCCCGCAGGCAGCAACTGCTGCGTGAGTGCCCCATAC TTGCTAACATTGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACAGAAGGTGCCGGGATA AGCAGCGGAAGGAGTCTTCACGGCTTCAGGCTGTCAACAGGAAATTGACGGCAATGAACA AGCTACTTATGGAAGAGAATGAGCGACTCCAGAAGCAGGTCTCCCAATTGGTTCATGAGA ATGCCCACATGCGACAGCAGCTGCAGAATACTCCGCTGGCAAATGATACAAGCTGTGAAT CAAATGTGACTACCCCTCAAAACCCTTTAAGGGATGCAAGTAACCCCTCTGGGCTCCTTT CAATTGCAGAGGAGACCTTGACAGAGTTCCTCTCAAAGGCTACTGGTACAGCTATTGATT GGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGTATTGTGGCCATTTCAC ATGGTTGCCGTGGTGTTGCTGCCCGTGCCTGTGGTTTGGTGAACCTAGAACCAACAAAAG TGGTAGAGATATTGAAAGATCGTCCATCTTGGTTCCGTGATTGTCGAAACCTGGAAGTCT TTACAATGATTCCAGCAGGAAATGGAGGAACGGTTGAACTTGTCTACACACAGTTGTATG CTCCAACAACTTTAGTTCCTGCACGAGATTTTTGGACGTTACGGTACACAACCACAATGG AAGATGGCAGTCTTGTGGTCTGTGAGAGATCTTTAAGTGGTTCAGGGGGCGGTCCAAGTG CTGCCTCTGCTCAGCAATATGTGAGAGCGGAAATGCTTCCAAGTGGATACCTGGTTCGCC CATGTGAAGGTGGGGGATCAATTGTGCACATAGTGGACCATCTGGATCTTGAGGCATGGA GTGTTCCTGAGGTGCTTCGGCCACTCTATGAATCTTCAAGGGTAGTCGCTCAGAAAATGA CTACTGCGGCACTCCGGCACATCAGACAAATTGCTCAAGAAACAAGTGGGGAAGTGGTGT ATGCCTTGGGGAGGCAACCAGCAGTGCTACGGACTTTTAGTCAAAGGCTGAGCAGAGGCT TTAACGATGCCATTAGTGGTTTCAATGATGATGGGTGGTCTATAATGGGCGGAGACGGTG TTGAAGATGTAGTTATTGCTTGCAACTCAACTAAGAAAATTAGGAGTAACAGCAATGCTG GCATCGCCTTTGGAGCCCCCGGAGGTATTATATGTGCTAAGGCATCAATGTTACTGCAGA GTGTTCCTCCAGCAGTACTGGTTCGATTTCTGAGGGAGCATAGATCTGAATGGGCCGATT ACAATATTGATGCATATTTGGCTTCAACTCTGAAAACAAGTGCATGTTCACTTACTGGGT TGCGACCCATGAGATTTTCTGGGAGCCAAATCATCATTCCACTTGCTCACACAGTTGAGA ATGAGGAGATTCTTGAAGTTGTTCGCCTTGAGGGTCAACCTCTTACTCATGATGAAGCTC TTCTTTCAAGGGATATCCACCTGCTTCAGCTCTGCACTGGAATAGACGAGAAGTCTGTGG GATCCTCCTTTCAGCTTGTGTTTGCACCGATTGATGATTTCCCAGATGAAACTCCATTGA TTTCTTCTGGCTTCCGTGTTATACCACTTGATATGAAAACAGATGGTGCATCCTCTGGTA GGACATTAGATTTGGCATCTAGTCTTGAAGTAGGTTCAGCAACAGCTCAAGCCTCCGGAG ATGCATCTGCAGATGATTGTAACTTGCGATCTGTTCTGACGATCGCTTTTCAATTCCCTT ACGAGTTGCATCTCCAAGACAGTGTTGCAGCTATGGCTCGCCAATATGTCCGTAGCATTG TTTCTGCTGTGCAAAGAGTGTCAATGGCTATCTCTCCCTCTCAAACTGGTCTAAATGCCG GACAGAGGATAATCTCTGGTTTCCCTGAAGCAGCAACCCTTGCTCGATGGGTTTGCCAGA GCTACCATTACCATCTAGGGGTAGAGTTACTTAGTCAATCAGATGGAGATGCAGAACAAT TGTTGAAGATGCTATGGCATTACCAAGATGCTATTTTGTGCTGCTCATTCAAGGAAAAAC CGGTGTTTACATTTGCCAACAAAGCAGGACTGGACATGCTAGAAACTTCCCTTGTCGCCT TACAGGACCTCACATTGGACAGGATCTTTGATGAGCCTGGAAAAGAAGCATTGTTCTCAA ACATTCCCAAATTGATGGAGCAGGGCCATGTCTACCTGCCATCAGGCGTGTGCATGTCAG GAATGGGTCGGCATGTTTCTTTCGATCAGGCCGTGGCTTGGAAAGTGCTTGCCGAGGATA GCAATGTTCACTGCCTGGCCTTCTGTTTCGTCAACTGGTCCTTTGTGTGACCATCCCACA TCCACTGCGAAGTGAAGATTCATTTTTGCTTGTTCAAGACTGTTTTGCACTAGATCTAGA CCTGAGAATCTAGTAGTATTTGCGAAATTTCTCGCTTATGTAAATGTAATCTCGCTCCCA TTCCATCAAGTACCCAAGTACAAGGCAGTGGCCAAGTGGTTTTAGTTGTAGGGGGATCGG AGCAATCCTGACGGTTGGGTACTTGGGTTCCTTCCAGCAATGTAAAATCGGATCCTGTAG GGCGTCGAAAACTGCATTGGCAAGATTCTTCGAAATGCAGACCAAATTTAGCTAGTACAT CGTAACTTTGGC