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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0108300-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:492815:494093:-1 gene:Os03g0108300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 19 description:Similar to xyloglucan endotransglucosylase/hydrolase protein 32. (Os03t0108300-01);Similar to Cellulase (EC 3.2.1.4). (Os03t0108300-02)
Sequence

ATGGAGCAGAAGCCACCAGCAGTTGCTGCTAATAATAATCAGCTGCTGCTGATGATGATA
ATGGTGGTGGTGGCGTGCAGTAATTATATGATTAGTGGCGCAGGAGCGCAGCCATCGCCG
GGATACTACCCGAGCAAGACGATCCGATCGATGGCGTTCGGCGAAGGGTACGACAACCTG
TGGGGCGGGCAGCACCAGACGCTGTCGGCGGACCAGACGGCGCTGACGGTGTGGATGGAC
CGGAGCTCCGGCAGCGGCTTCAAGTCCAAGCGCTCCTACCGCAACGGCTACTTCGGCGCC
TCCATCAAGGTCCCCTCCGGCTACACCGCCGGCGTCAACACCGCCTTCTACCTGTCGAAC
AACGAGCTGTACCCGGGGCAGCACGACGAGATCGACATAGAGCTGCTGGGGACGGTGCCG
GGGGAGCCGTGGACGCTGCAGACGAACGTGTACGTGCACGGCACCGGCGACGGCGCCATC
ATCGGGAGGGAGATGCGGTTCCACCTCTGGTTCGACCCCACCGCCGACTTCCACCACTAC
GCCATCCTCTGGAACCCCGACCACATCGTCTTCCTCGTCGACGACGTCCCCGTCCGCCGT
TACCCGCGCGCCGCCGGCAACACATTCCCCGACCGCCAGATGTGGGCCTACGGCTCCATC
TGGGACGCCTCCGACTGGGCCACCGACGGCGGCCGCTACAAGTCCGACTACCGCTACCAG
CCCTTCGTCTCGCGCTACCGAGACCTCAAGATCGCCGGCTGCGAGGCCGCCGCGCCGGCG
AGCTGCCAGCCCGTGCCGGCGTCGCCGTCGGGCGCCACCGGCGAGCTCAGCGCGCAGCAG
AAGGCGGCCATGAGGTGGGCGCAGCAGAGGTCCATGGTCTACTACTACTGCCAGGACTAC
TCCAGGAATCACGCCAACTACCCCGAGTGCTAG

Peptide Sequence

PEP ID

Os03t0108300-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:492815:494093:-1 gene:Os03g0108300 transcript:Os03t0108300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 19 description:Similar to xyloglucan endotransglucosylase/hydrolase protein 32. (Os03t0108300-01);Similar to Cellulase (EC 3.2.1.4). (Os03t0108300-02)
Sequence

MEQKPPAVAANNNQLLLMMIMVVVACSNYMISGAGAQPSPGYYPSKTIRSMAFGEGYDNL
WGGQHQTLSADQTALTVWMDRSSGSGFKSKRSYRNGYFGASIKVPSGYTAGVNTAFYLSN
NELYPGQHDEIDIELLGTVPGEPWTLQTNVYVHGTGDGAIIGREMRFHLWFDPTADFHHY
AILWNPDHIVFLVDDVPVRRYPRAAGNTFPDRQMWAYGSIWDASDWATDGGRYKSDYRYQ
PFVSRYRDLKIAGCEAAAPASCQPVPASPSGATGELSAQQKAAMRWAQQRSMVYYYCQDY
SRNHANYPEC

Transcript Sequence

Transcript ID

Os03t0108300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:492815:494093:-1 gene:Os03g0108300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 19 description:Similar to xyloglucan endotransglucosylase/hydrolase protein 32. (Os03t0108300-01);Similar to Cellulase (EC 3.2.1.4). (Os03t0108300-02)
Sequence

AGACCAGCAGGAGCTAGTCAGTAGAAGAAGAGACATTATTTGTAGGCAGCAGCTAGAAAT
TAAGGACGATTATCGATGGAGCAGAAGCCACCAGCAGTTGCTGCTAATAATAATCAGCTG
CTGCTGATGATGATAATGGTGGTGGTGGCGTGCAGTAATTATATGATTAGTGGCGCAGGA
GCGCAGCCATCGCCGGGATACTACCCGAGCAAGACGATCCGATCGATGGCGTTCGGCGAA
GGGTACGACAACCTGTGGGGCGGGCAGCACCAGACGCTGTCGGCGGACCAGACGGCGCTG
ACGGTGTGGATGGACCGGAGCTCCGGCAGCGGCTTCAAGTCCAAGCGCTCCTACCGCAAC
GGCTACTTCGGCGCCTCCATCAAGGTCCCCTCCGGCTACACCGCCGGCGTCAACACCGCC
TTCTACCTGTCGAACAACGAGCTGTACCCGGGGCAGCACGACGAGATCGACATAGAGCTG
CTGGGGACGGTGCCGGGGGAGCCGTGGACGCTGCAGACGAACGTGTACGTGCACGGCACC
GGCGACGGCGCCATCATCGGGAGGGAGATGCGGTTCCACCTCTGGTTCGACCCCACCGCC
GACTTCCACCACTACGCCATCCTCTGGAACCCCGACCACATCGTCTTCCTCGTCGACGAC
GTCCCCGTCCGCCGTTACCCGCGCGCCGCCGGCAACACATTCCCCGACCGCCAGATGTGG
GCCTACGGCTCCATCTGGGACGCCTCCGACTGGGCCACCGACGGCGGCCGCTACAAGTCC
GACTACCGCTACCAGCCCTTCGTCTCGCGCTACCGAGACCTCAAGATCGCCGGCTGCGAG
GCCGCCGCGCCGGCGAGCTGCCAGCCCGTGCCGGCGTCGCCGTCGGGCGCCACCGGCGAG
CTCAGCGCGCAGCAGAAGGCGGCCATGAGGTGGGCGCAGCAGAGGTCCATGGTCTACTAC
TACTGCCAGGACTACTCCAGGAATCACGCCAACTACCCCGAGTGCTAGTGGTTGAGCCAT
GCATCTTCAGTTTCACATCGTTTCATGTGTTGTGTGCACCACGTAGTACGAGCACCAACA
CGTATCTACTATTACCCTCATCATAATTATTGTGTACGATTGGATTGAGGTGTGCAGCTG
TGTCACCCAAAATTTCACTTCGACCTGCAATGCAAGCATGTGTTCC