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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0108000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:482938:484739:-1 gene:Os03g0108000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARSENATE REDUCTASE 2 description:Dual-specificity tyrosine-phosphatase CDC25, Arsenic metabolism (Os03t0108000-01)
Sequence

ATGGCGAGGGGCGTCTCCTACGTTTCCGCGGCGCAGCTCGTCCCCATGCTCCGGGACCCC
CGGATCGCCGTCGTCGATGTCAGGGACGAAGAGAGGATCTACGACGCGCACATCGCCGGC
TCGCATCATTACGCCAGCGACAGCTTCGGGGAGCGGCTGCCGGAGCTGGCCCAGGCCACC
AAGGGCAAGGAAACCCTCGTCTTCCACTGTGCCCTCAGCAAGGTGCGTGGCCCATCTTGT
GCGCAAATGTATCTGGACTATTTGTCAGAGGCTGATGAAGATTCAGATGTAAAGAACATC
ATGGTCCTTGAACGTGGATTTAATGGATGGGAACTTTCAGGGAGGCCTGTTTGCCGCTGC
AAGGACGCTCCTTGCAAGGGTGTGTGCTCTTGA

Peptide Sequence

PEP ID

Os03t0108000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:482938:484739:-1 gene:Os03g0108000 transcript:Os03t0108000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARSENATE REDUCTASE 2 description:Dual-specificity tyrosine-phosphatase CDC25, Arsenic metabolism (Os03t0108000-01)
Sequence

MARGVSYVSAAQLVPMLRDPRIAVVDVRDEERIYDAHIAGSHHYASDSFGERLPELAQAT
KGKETLVFHCALSKVRGPSCAQMYLDYLSEADEDSDVKNIMVLERGFNGWELSGRPVCRC
KDAPCKGVCS

Transcript Sequence

Transcript ID

Os03t0108000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:482938:484739:-1 gene:Os03g0108000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARSENATE REDUCTASE 2 description:Dual-specificity tyrosine-phosphatase CDC25, Arsenic metabolism (Os03t0108000-01)
Sequence

GGCCCATCAAACACAGAGTGCCATCGCTCACACGGCCGGCGGCGGCGGCGATGGCGAGGG
GCGTCTCCTACGTTTCCGCGGCGCAGCTCGTCCCCATGCTCCGGGACCCCCGGATCGCCG
TCGTCGATGTCAGGGACGAAGAGAGGATCTACGACGCGCACATCGCCGGCTCGCATCATT
ACGCCAGCGACAGCTTCGGGGAGCGGCTGCCGGAGCTGGCCCAGGCCACCAAGGGCAAGG
AAACCCTCGTCTTCCACTGTGCCCTCAGCAAGGTGCGTGGCCCATCTTGTGCGCAAATGT
ATCTGGACTATTTGTCAGAGGCTGATGAAGATTCAGATGTAAAGAACATCATGGTCCTTG
AACGTGGATTTAATGGATGGGAACTTTCAGGGAGGCCTGTTTGCCGCTGCAAGGACGCTC
CTTGCAAGGGTGTGTGCTCTTGAGTATCCATATGAAACTATGCATTTACCTGTGCATTTC
AAATTTGGTTGCTACCTGCAGACTTCAGGGTAGCCATTTATGCTTTATGGTCACTACAGC
ACATTAAAAACCGTGTATCTCACTTTGGTGGATCCGCAATTGTGCTATTATGTGGCTCTA
TCAATTCAGTGGCCGTTAATGTCACTTCACGACATGTAAACTGAAAACCACATTGGTAAT
TATTGAAAATCTTCTGCTTCCGTTCC