Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0107600-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:465247:468002:1 gene:Os03g0107600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0716A07.6 protein. (Os03t0107600-01);Similar to H0716A07.6 protein. (Os03t0107600-02);Similar to H0716A07.6 protein. (Os03t0107600-03)
Sequence

ATGCCGATTTCGTACGTGGTCGTGGTCCCTGGGTGGATTATTGGACACGAGAAATCCATG
GCATGGGGAGGTCTCTTCTTGAGCTTCAGCCGTCCCTCACAGGACCAACAGAAGTCATGC
CTTTCAGCTGCTGGTGGTTTCAACTATGATGCGCCTCTCCATGGTGCCTCAAGACCAAAA
TCAGTAGCTAAATTGACTGCGGGAGATACTGAAGCAAGTGACAAAGCGCTTGTCGAGCGC
GGCTTCTTCGTGAACCGTTCACGTGTTCTGGTTGGCTCTGGCACTACCACCTTCAACCAT
GCCAAATCCGCGCTTCTCTCCTGGAAGCATTTGGCACTAGGCTGGGCAAATGTGGAACCC
GACACACCGGTGAAGGCTGGAACAAGGTTCTGCATTTGTTACAAGGAGCTGATCCCTTGG
GTCATGTTGCCCCTCCAGATTGCCTATGTGACCGATGGCAATGGAGGCAACTCCTCAGGC
CATGGAAAAGGCTGCGTTTTTGCTTATGGTAGCGGCACTCTACAAGGCCATCTGCTGGCA
GGGGAGGAGAGGTTCTCGGTGCAGCTGGACGAAGACGATCAGGTGTGGTACGAGGTGATG
TCCTTCTCGAAGCCAGCACACATCCTGTCCAGCCTCTGCTACCCGTACGTGCAGCTGAGG
CAGAAGCATTTCGCGCATCAGTCAGGGCAGGCACTGCTCAGGCATGTTGCCAGCCGCTCC
AGGGACACACGGTGA

Peptide Sequence

PEP ID

Os03t0107600-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:465247:468002:1 gene:Os03g0107600 transcript:Os03t0107600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0716A07.6 protein. (Os03t0107600-01);Similar to H0716A07.6 protein. (Os03t0107600-02);Similar to H0716A07.6 protein. (Os03t0107600-03)
Sequence

MPISYVVVVPGWIIGHEKSMAWGGLFLSFSRPSQDQQKSCLSAAGGFNYDAPLHGASRPK
SVAKLTAGDTEASDKALVERGFFVNRSRVLVGSGTTTFNHAKSALLSWKHLALGWANVEP
DTPVKAGTRFCICYKELIPWVMLPLQIAYVTDGNGGNSSGHGKGCVFAYGSGTLQGHLLA
GEERFSVQLDEDDQVWYEVMSFSKPAHILSSLCYPYVQLRQKHFAHQSGQALLRHVASRS
RDTR

Transcript Sequence

Transcript ID

Os03t0107600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:465247:468002:1 gene:Os03g0107600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0716A07.6 protein. (Os03t0107600-01);Similar to H0716A07.6 protein. (Os03t0107600-02);Similar to H0716A07.6 protein. (Os03t0107600-03)
Sequence

ATTTCCTCCCCGTCACGAGCAAGGCGCGAGCCCGGCCGCGAGCGTCGAGCAAGCAGCGCT
CCACCATCGTCTCCCCTCCGCCCGCCGTTGTCTCGATCCCCTCTGCTCGTCGCATGCCGC
TGTACCAAACAAACCACCATCTGTCACCGTCTCTTCTCCTCCCCGCTTCACCAATCAATC
CAAACCCTAGAGCAATACCCCTTGCTGGAATCGCTCGCACCCTAGAGCTCCAGTTCCCAC
CCCAGCCACGGCGGATCAGGGGCAGTCTGGTCTGCTGCCGCAGCGATATCGTGCGCCCCG
GATTTGAGAGTTCCAATGCCGATTTCGTACGTGGTCGTGGTCCCTGGGTGGATTATTGGA
CACGAGAAATCCATGGCATGGGGAGGTCTCTTCTTGAGCTTCAGCCGTCCCTCACAGGAC
CAACAGAAGTCATGCCTTTCAGCTGCTGGTGGTTTCAACTATGATGCGCCTCTCCATGGT
GCCTCAAGACCAAAATCAGTAGCTAAATTGACTGCGGGAGATACTGAAGCAAGTGACAAA
GCGCTTGTCGAGCGCGGCTTCTTCGTGAACCGTTCACGTGTTCTGGTTGGCTCTGGCACT
ACCACCTTCAACCATGCCAAATCCGCGCTTCTCTCCTGGAAGCATTTGGCACTAGGCTGG
GCAAATGTGGAACCCGACACACCGGTGAAGGCTGGAACAAGGTTCTGCATTTGTTACAAG
GAGCTGATCCCTTGGGTCATGTTGCCCCTCCAGATTGCCTATGTGACCGATGGCAATGGA
GGCAACTCCTCAGGCCATGGAAAAGGCTGCGTTTTTGCTTATGGTAGCGGCACTCTACAA
GGCCATCTGCTGGCAGGGGAGGAGAGGTTCTCGGTGCAGCTGGACGAAGACGATCAGGTG
TGGTACGAGGTGATGTCCTTCTCGAAGCCAGCACACATCCTGTCCAGCCTCTGCTACCCG
TACGTGCAGCTGAGGCAGAAGCATTTCGCGCATCAGTCAGGGCAGGCACTGCTCAGGCAT
GTTGCCAGCCGCTCCAGGGACACACGGTGATCGACTTCGTCTGCAGATTTGATCTTTTCT
TCAGGAGTAGTCTTCGCATGTTGTGAGTGAGCCTGCTTGTATGTTCCTGTATCTATGTCC
GAATCTGCTCCTGAGAGCATTATTAGTTTGTAGTTTGAATTTTTGAGCTCAGGGTAATTA
TTTAGCATTTGTGCTTTGTTGTTAAGTTTTAGATCAAATTGAGGTGTTATGGTGATGTAA
ATTCAGATTTCCATGGTTTGTTACTAAATCAAAAGGAAGAATGAAAGATAAGCACAAGAG
GAACCCCACAGTTCCACGGAACAGGTAGAAGAGACGTCTTGCACCAGGCAAACGCCCCTT
GTTTATAGTGATGAGAGTATGGATTATCTGTTTGTCCCCTTTACCATGGTAGTAGAGTAC
TCAATGGATTAGCAACTTTTTCC