Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0106000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:356871:359717:-1 gene:Os03g0106000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0187 domain containing protein. (Os03t0106000-01)
Sequence	ATGGCGGCGCCGCCCAGGCCCATACCCTCCATCCACCGGCAACCGCCCAAGCCAACCACC ACCCACGTCGCCCGCTGCTTCCGCGACCCGCCCAAAGCCCCCGACACCAACAGCAACACC AACCCGCTCCTCTCCCTCCTCTCCGCCGTGCCCGACTGGGCCGACGCCGTCTCCGAGCGC CGCATCCGCGACCGCCGCCCGCTCTACACCCACGCCGACTGGCGGGAGCACCGCAGCTCC CGCCGCCACCTGCGCCACCTCCTCTCCTCCCTCACCTCCCGCGTCATCCTCTCCCTCGCG CCCCCCGTCTCCGCCTTCACCGCCTTCGCCGCCGCCATTGCCACCTACAACACCCTCCTC CCCGCCTACGCCCTCACCGCCTCCTCCCTCCCCTACCAGCTCACCGCCCCCGCCCTCGCC CTCCTCCTCGTCTTCCGCACCGAGGCCTCCTACGCCCGCTTCGACGAGGGACGCAAGGCA TGGATGCGCGTCATCGCCGCCGCCGCCGACCTCGCCGGGATGGCCATGCGCCACCACAAC CCCCCTGCCACGCGCGCCCTCCTCAACTACATTCTCGCCTTCCCGCTCGCGCTCAAGTGT CATATAATCTGCCATTCGGACATAAAAAGGGACCTTCAGGGTTTGCTCTCAGAAGATGAC TTGAATGTTGTTCTCAGATCAAAACATCGTCCTCGCTGTATTATTGAGTTCATTTCACAG AGCCTCTATATGTTGGATTTCGATGAAAATAAGCGGAATATCATGGAGTCTAAACTATCT TGTTTTCTTGAAGGAATTAGTGTTTGTGAGCAGCTCATTGGGATTCCTATTCCTCTCTCA TACACTAGACTCACTTCCAGATTTCTTGTTCTGTGGCATCTCACGCTTCCAGTGATACTC TGGGATGAATGTAAATGGATAGTCGTTCCAGCTACTTTTATCAGTGCTGCCTCTCTATTC TGCATTGAGGAAGTTGGTGTTCTTATTGAGGAGCCATTCCCCATGCTAGCTCTAGACGAG CTGTGCAAGCAGCTCCATGACAGCACGCAGGATGTGATGTCGGTGCAAAATTTGGTTCAC AATCGACTAGCCGCCAAGACAAAGGACCAAGACAGTGGCAGCATGCGATGTTCAGACAAC GGGTGGCCTAGCTCCAAAAGCGAACAAGCAAAAATTGATTGA

Peptide Sequence

PEP ID	Os03t0106000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:356871:359717:-1 gene:Os03g0106000 transcript:Os03t0106000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0187 domain containing protein. (Os03t0106000-01)
Sequence	MAAPPRPIPSIHRQPPKPTTTHVARCFRDPPKAPDTNSNTNPLLSLLSAVPDWADAVSER RIRDRRPLYTHADWREHRSSRRHLRHLLSSLTSRVILSLAPPVSAFTAFAAAIATYNTLL PAYALTASSLPYQLTAPALALLLVFRTEASYARFDEGRKAWMRVIAAAADLAGMAMRHHN PPATRALLNYILAFPLALKCHIICHSDIKRDLQGLLSEDDLNVVLRSKHRPRCIIEFISQ SLYMLDFDENKRNIMESKLSCFLEGISVCEQLIGIPIPLSYTRLTSRFLVLWHLTLPVIL WDECKWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCKQLHDSTQDVMSVQNLVH NRLAAKTKDQDSGSMRCSDNGWPSSKSEQAKID

Transcript Sequence

Transcript ID	Os03t0106000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:356871:359717:-1 gene:Os03g0106000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0187 domain containing protein. (Os03t0106000-01)
Sequence	GTTCCTCCGCCACAAACCAAACGCCAATTAATGGCTTGACCAACCACCGCGCGCGCCGCC GTCTTTCGCCGACGCCGAGGAGGCCGGCCATGGCGGCGCCGCCCAGGCCCATACCCTCCA TCCACCGGCAACCGCCCAAGCCAACCACCACCCACGTCGCCCGCTGCTTCCGCGACCCGC CCAAAGCCCCCGACACCAACAGCAACACCAACCCGCTCCTCTCCCTCCTCTCCGCCGTGC CCGACTGGGCCGACGCCGTCTCCGAGCGCCGCATCCGCGACCGCCGCCCGCTCTACACCC ACGCCGACTGGCGGGAGCACCGCAGCTCCCGCCGCCACCTGCGCCACCTCCTCTCCTCCC TCACCTCCCGCGTCATCCTCTCCCTCGCGCCCCCCGTCTCCGCCTTCACCGCCTTCGCCG CCGCCATTGCCACCTACAACACCCTCCTCCCCGCCTACGCCCTCACCGCCTCCTCCCTCC CCTACCAGCTCACCGCCCCCGCCCTCGCCCTCCTCCTCGTCTTCCGCACCGAGGCCTCCT ACGCCCGCTTCGACGAGGGACGCAAGGCATGGATGCGCGTCATCGCCGCCGCCGCCGACC TCGCCGGGATGGCCATGCGCCACCACAACCCCCCTGCCACGCGCGCCCTCCTCAACTACA TTCTCGCCTTCCCGCTCGCGCTCAAGTGTCATATAATCTGCCATTCGGACATAAAAAGGG ACCTTCAGGGTTTGCTCTCAGAAGATGACTTGAATGTTGTTCTCAGATCAAAACATCGTC CTCGCTGTATTATTGAGTTCATTTCACAGAGCCTCTATATGTTGGATTTCGATGAAAATA AGCGGAATATCATGGAGTCTAAACTATCTTGTTTTCTTGAAGGAATTAGTGTTTGTGAGC AGCTCATTGGGATTCCTATTCCTCTCTCATACACTAGACTCACTTCCAGATTTCTTGTTC TGTGGCATCTCACGCTTCCAGTGATACTCTGGGATGAATGTAAATGGATAGTCGTTCCAG CTACTTTTATCAGTGCTGCCTCTCTATTCTGCATTGAGGAAGTTGGTGTTCTTATTGAGG AGCCATTCCCCATGCTAGCTCTAGACGAGCTGTGCAAGCAGCTCCATGACAGCACGCAGG ATGTGATGTCGGTGCAAAATTTGGTTCACAATCGACTAGCCGCCAAGACAAAGGACCAAG ACAGTGGCAGCATGCGATGTTCAGACAACGGGTGGCCTAGCTCCAAAAGCGAACAAGCAA AAATTGATTGAGCAAAGGTGCGGAATTATGAAGGCTATACTAGTACATGTCATTGCAAAG CAATAAAGGCCTTGTTGGTTCAATATCAAGCAAGGTATAAATCGATGGTGTGCATATGTA CCCTGGCTGCATATTTGCCATCCCATTCGCAGGTCCATTTTGGTACATGGATGTACTCCA GTACGAGAGCTAGGATTTCATCATCCAATGTAAAATTGATTAAGCGATCAGATGCGGTGA CCTTACGTAGCCTAGTTTGCTGGAGGAAGCATGCGTGTTACGGATGTAGAGAGATATGGT GAATAGTTCCTAGATGTGTGTATATATGTAGAAAAGATTTTGACGAGCCGTATCAGCCCG TATGTAAAGATTTGACATTACGTACTGTTATGTTGTTATTGCCAAACAGAATACAGTAGC TGGTGGAAGGGCTTTGACATG