Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0103400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:235340:238039:1 gene:Os03g0103400 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os03t0103400-01)
Sequence

GGGGAGTTAGCAGCTTCTTCTTCTTCATTCACCCTGACTTCGCCCGGCCTCCGCCCGCCC
ACCCACGCGGCCTCAACGCCGCCGCCGCCGCCATGGCTCGACGACGCCGACCACCACCAC
GACAACGCCTTCCTCCACTGGGTCATCAACGACCACCACCATCCACTCCTTGATCTTGAT
GACGTCGACCTCGACTACGCTAAGCCTGCACCTTTCTTCTTCGCTGATCGAGGCCTGCAC
CACCACCACCCAGCTTCTTCGTCTTTCCCAAACCCAAAGCCGACGGCCGACGACAACACT
AGTACTGTGGAGCAGCTGGTCCAGGCCGCCAAACTCACCGAGGCCGGCGACGTCTTGGCC
GCCCGACACATCTTGGCGCGCCCGGCGATCAACTACCGCCTCCCCGCCTCCGCCGCCCCG
CCGCTACTCCGCTCCGCCTTGTATTTCAAGGACGCCCTGCGCCGAGCCCTCATCTCCGAC
GACGACTCCTCCTCCTCCTCTACACCGCCCCCGCCCCTCCACGAGCCGCACCCGCACGAC
CTCCTCCTCAAGCTCACCTCCTACAAGTCCTTCTCCGACCTCTCCCCGCTGCTCCACTTC
GCCCACTTCACCTGCGTCCAGGCCGTCCTCGACGAGCTCGCACCCTCCGCCTCCTGCATC
CACCTCCTCGACTTCGACATCGGTGTCGGCGAGCAGTGGGCCTCCCTCATGCATGACCTC
GCCCACCGCCACCCCGGCGTCGCCCTCAAGGTCACCGCCCTCAACGTCACCGCCTCCTCC
TCCTCCCATCACCCGCTCCAGCTGCAGCTCATCCACGACACCCTCTCCACCTTCGCCGCC
GACCTCTCCGTCCCCTTCCGCTTCGCCGCCTTCAACCTCGACGCCACCGACCTCACCCCC
CTTCTTGCCGTTGCCGCCGCCACCGACGCCATTGCCGTCCACCTTCCCGTCGGCTCGGTC
CACGCCACCGCAGTGCCGTCCGTGCTTCACCTGGTCAGGCGCCTTGGCGCCAAGCTGGTT
GTCTCCGTGGACCGCGGCTGTGACCGCGGCGAGCTGCCGTTCGCGGCGCACCTGCTGCAG
GCATTGCGCTCCACCGTGTCCCTGCTGGAGTCGCTGGACGCCATGGGCACGGACTCCGAC
GTGGCGGCCAAGATCGAGCGGTTCTGGGTCCAGCCAAAGATCCAAGAGTGCGTGCGCGCC
GCCGTGGGGGTGGGGGGCGACAAGACGGCGGCGTCGGCGTGGCGGGCGACGCTGGCGTCG
GCGGGGTTCGTGCCGGTGCAAGTGAGCAGCATGGCGGAGGCGCAGGCGGAGTCTCTCCTG
AAGAAGCTGCCGGTGAGGGGATTCCGACTGGAGAGGCGCGCCGGCTCGCTCTTCCTCCAT
TGGCAACGCGGGGAGCTTGCCTCCGTCTCCGCATGGCGCTGTTAA

Peptide Sequence

PEP ID

Os03t0103400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:235340:238039:1 gene:Os03g0103400 transcript:Os03t0103400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os03t0103400-01)
Sequence

GELAASSSSFTLTSPGLRPPTHAASTPPPPPWLDDADHHHDNAFLHWVINDHHHPLLDLD
DVDLDYAKPAPFFFADRGLHHHHPASSSFPNPKPTADDNTSTVEQLVQAAKLTEAGDVLA
ARHILARPAINYRLPASAAPPLLRSALYFKDALRRALISDDDSSSSSTPPPPLHEPHPHD
LLLKLTSYKSFSDLSPLLHFAHFTCVQAVLDELAPSASCIHLLDFDIGVGEQWASLMHDL
AHRHPGVALKVTALNVTASSSSHHPLQLQLIHDTLSTFAADLSVPFRFAAFNLDATDLTP
LLAVAAATDAIAVHLPVGSVHATAVPSVLHLVRRLGAKLVVSVDRGCDRGELPFAAHLLQ
ALRSTVSLLESLDAMGTDSDVAAKIERFWVQPKIQECVRAAVGVGGDKTAASAWRATLAS
AGFVPVQVSSMAEAQAESLLKKLPVRGFRLERRAGSLFLHWQRGELASVSAWRC

Transcript Sequence

Transcript ID

Os03t0103400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:235340:238039:1 gene:Os03g0103400 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os03t0103400-01)
Sequence

AACCAAATTAAAGCTGCCTACGTGAGTGTGAGGGGAGTTAGCAGCTTCTTCTTCTTCATT
CACCCTGACTTCGCCCGGCCTCCGCCCGCCCACCCACGCGGCCTCAACGCCGCCGCCGCC
GCCATGGCTCGACGACGCCGACCACCACCACGACAACGCCTTCCTCCACTGGGTCATCAA
CGACCACCACCATCCACTCCTTGATCTTGATGACGTCGACCTCGACTACGCTAAGCCTGC
ACCTTTCTTCTTCGCTGATCGAGGCCTGCACCACCACCACCCAGCTTCTTCGTCTTTCCC
AAACCCAAAGCCGACGGCCGACGACAACACTAGTACTGTGGAGCAGCTGGTCCAGGCCGC
CAAACTCACCGAGGCCGGCGACGTCTTGGCCGCCCGACACATCTTGGCGCGCCCGGCGAT
CAACTACCGCCTCCCCGCCTCCGCCGCCCCGCCGCTACTCCGCTCCGCCTTGTATTTCAA
GGACGCCCTGCGCCGAGCCCTCATCTCCGACGACGACTCCTCCTCCTCCTCTACACCGCC
CCCGCCCCTCCACGAGCCGCACCCGCACGACCTCCTCCTCAAGCTCACCTCCTACAAGTC
CTTCTCCGACCTCTCCCCGCTGCTCCACTTCGCCCACTTCACCTGCGTCCAGGCCGTCCT
CGACGAGCTCGCACCCTCCGCCTCCTGCATCCACCTCCTCGACTTCGACATCGGTGTCGG
CGAGCAGTGGGCCTCCCTCATGCATGACCTCGCCCACCGCCACCCCGGCGTCGCCCTCAA
GGTCACCGCCCTCAACGTCACCGCCTCCTCCTCCTCCCATCACCCGCTCCAGCTGCAGCT
CATCCACGACACCCTCTCCACCTTCGCCGCCGACCTCTCCGTCCCCTTCCGCTTCGCCGC
CTTCAACCTCGACGCCACCGACCTCACCCCCCTTCTTGCCGTTGCCGCCGCCACCGACGC
CATTGCCGTCCACCTTCCCGTCGGCTCGGTCCACGCCACCGCAGTGCCGTCCGTGCTTCA
CCTGGTCAGGCGCCTTGGCGCCAAGCTGGTTGTCTCCGTGGACCGCGGCTGTGACCGCGG
CGAGCTGCCGTTCGCGGCGCACCTGCTGCAGGCATTGCGCTCCACCGTGTCCCTGCTGGA
GTCGCTGGACGCCATGGGCACGGACTCCGACGTGGCGGCCAAGATCGAGCGGTTCTGGGT
CCAGCCAAAGATCCAAGAGTGCGTGCGCGCCGCCGTGGGGGTGGGGGGCGACAAGACGGC
GGCGTCGGCGTGGCGGGCGACGCTGGCGTCGGCGGGGTTCGTGCCGGTGCAAGTGAGCAG
CATGGCGGAGGCGCAGGCGGAGTCTCTCCTGAAGAAGCTGCCGGTGAGGGGATTCCGACT
GGAGAGGCGCGCCGGCTCGCTCTTCCTCCATTGGCAACGCGGGGAGCTTGCCTCCGTCTC
CGCATGGCGCTGTTAATTCATCCACTACTCTCTACTAATTACTCCTTATTAATAATTAAT
GCTCAAATTGTTACTCCTTATTATGCATGCATGTTACTACTACTTAATTTGCTCAATTGC
CGTCTTAAGGCTACTTTGATAGAGTACTGTACAGTGACACTCTACTGTTAAATCAAATGG
TTTTCTATCAGGTATTTTAATTTGCTTCGTCAAGTTCAGCATCCTAACCTTGATTGGAAT
GATTGTACAATAAGCATTACATACATAATGCCAAAACGAATAAGTTCATTGCATTACCTG
AGAACCTGTGGATACATCCAAAAACTAATAGTGTCATGAAACAGCGGTTGGTTTTACTAA
CTGTATATGGGGACAAATATACACAAATTTGTGATTAGTCTAGCTTCCTGATTAAAAATA
TTAAATCCTTTTCTGATAGGTTGAGACGAATAAGAAGACATTCAGTATTCTAATATGCGA
TGCGTCAAACAGCCATCCGAAACTGTCAACTTCTGCTGACTAACACAAAAAAAAGTTTCG
AAAAAAGTAACAAGTAATTTCAAAGTACACTCATACCACCTCCACAAATTAATTAAACTA
GCAGGTTATTATATATAGATATTTGATGCATTGTGTACTATTTGTGCGTTCAATTTTACA
GTTCTAACAGGCTAGTGAATTCTTCAGTCCCACCTCCCGTTTGTTTGATTGTCAGTTTAC
CACTCGCTAACTGATTACTAGGTAGTATTTTCTGAAAAATGAAAACGTGTTATTTTATCA
TCGTGCATACATACATAATCGAGTTTTTTGTTTTAAAAATGTACTATTTTCTCCCAAAAT
TATTTTTTTGCCACTAGAAGGGGCATGTGGTTTTAGCCAAACTTAGCTAATCTGATGACT
CTGGACCAGGGAATATCAAGATACAGTGAGAACAAAATGCTGTCTTCACGATCGAACCCT
TAAGACACCTGGAAAGCAGAATTACACGAGAAGTGCATGTTTTAAGAATATTTATAGCCT
TTTTGATATTATATGTTAGGAGAACATTACCAAGTTGACAATTGCGGGATGCAGCAGGGA
TTGGGAATAAAGTTGCACTGGGTTTTTAGAGACAAGCATAAAGTAGCAGAAATTTTTTTG
TTTGTGAGAGTGGGATTCTTATTTGCATTATGTGAATGTGACCACCAAAGTGTCTAAATA
GTTATATAGCTTCGACAAGCTGTGCATCTGTATAATATGTATATATATTGGTGGTCTACT