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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0102700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:189695:191268:1 gene:Os03g0102700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-EXPANSIN 7 description:Similar to Expansin-B7. (Os03t0102700-01)
Sequence

TCCTCCTCCAATTCCAGCACCCCCAGTATTCCTCCTCCTGTTGCCCCTACTCCTACTGCT
CCTACTCCTCCTATTCCCAGCCCCGGAACTGGAAGCAGCAACGGCAGCAGTGGCGGTGGC
GGCGGCGGGTGGCTGAACGCCCGTGCGACCTGGTACGGCGCTCCCAACGGCGCTGGGCCG
GACGACAACGGCGGCGCGTGTGGGTTCAAGAATGTGAACCTGCCGCCCTTCTCGGCCATG
ACTTCCTGCGGAAATGAGCCTCTCTTCAAGGACGGCAAGGGATGCGGCTCCTGCTACCAG
ATCCGATGCGTGGGGCACCCAGCCTGCTCGGGGCTCCCGGAGACGGTGATCATCACGGAC
ATGAACTACTACCCAGTGTCGCTGTACCACTTCGACCTCAGCGGCACGGCGTTCGGCGCC
ATGGCCAAGGACAACCGCAACGACGAGCTCCGCCACGCCGGCATCATCGACATCCAGTTC
AGGAGGGTGCCTTGTCAGTATCCAGGGCTGACGGTGACGTTCCACGTGGAGCAAGGGTCG
AACCCGGTGTACATGGCGATACTGGTGGAGTACGAGAACGGGGACGGGGACGTGGTGCAG
GTGGACCTGATGGAGTCGCGCTACAGCACCGGGGGCGTGGATGGGACGCCGACGGGGGTG
TGGACGCCGATGAGGGAGTCGTGGGGATCGATATGGAGGCTGGACACCAACCACCCGCTG
CAGGGGCCCTTCTCCCTCCGCATCACCAACGAGTCCGGCAAGACCCTCATCGCCGATCAG
GTCATCCCCGCCGACTGGCAGCCCAACACCGTCTACAGCTCCATCGTCCAGTTCGACTAG

Peptide Sequence

PEP ID

Os03t0102700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:189695:191268:1 gene:Os03g0102700 transcript:Os03t0102700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-EXPANSIN 7 description:Similar to Expansin-B7. (Os03t0102700-01)
Sequence

SSSNSSTPSIPPPVAPTPTAPTPPIPSPGTGSSNGSSGGGGGGWLNARATWYGAPNGAGP
DDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITD
MNYYPVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGS
NPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPL
QGPFSLRITNESGKTLIADQVIPADWQPNTVYSSIVQFD

Transcript Sequence

Transcript ID

Os03t0102700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:189695:191268:1 gene:Os03g0102700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-EXPANSIN 7 description:Similar to Expansin-B7. (Os03t0102700-01)
Sequence

CTTCCTCCTCCAATTCCAGCACCCCCAGTATTCCTCCTCCTGTTGCCCCTACTCCTACTG
CTCCTACTCCTCCTATTCCCAGCCCCGGAACTGGAAGCAGCAACGGCAGCAGTGGCGGTG
GCGGCGGCGGGTGGCTGAACGCCCGTGCGACCTGGTACGGCGCTCCCAACGGCGCTGGGC
CGGACGACAACGGCGGCGCGTGTGGGTTCAAGAATGTGAACCTGCCGCCCTTCTCGGCCA
TGACTTCCTGCGGAAATGAGCCTCTCTTCAAGGACGGCAAGGGATGCGGCTCCTGCTACC
AGATCCGATGCGTGGGGCACCCAGCCTGCTCGGGGCTCCCGGAGACGGTGATCATCACGG
ACATGAACTACTACCCAGTGTCGCTGTACCACTTCGACCTCAGCGGCACGGCGTTCGGCG
CCATGGCCAAGGACAACCGCAACGACGAGCTCCGCCACGCCGGCATCATCGACATCCAGT
TCAGGAGGGTGCCTTGTCAGTATCCAGGGCTGACGGTGACGTTCCACGTGGAGCAAGGGT
CGAACCCGGTGTACATGGCGATACTGGTGGAGTACGAGAACGGGGACGGGGACGTGGTGC
AGGTGGACCTGATGGAGTCGCGCTACAGCACCGGGGGCGTGGATGGGACGCCGACGGGGG
TGTGGACGCCGATGAGGGAGTCGTGGGGATCGATATGGAGGCTGGACACCAACCACCCGC
TGCAGGGGCCCTTCTCCCTCCGCATCACCAACGAGTCCGGCAAGACCCTCATCGCCGATC
AGGTCATCCCCGCCGACTGGCAGCCCAACACCGTCTACAGCTCCATCGTCCAGTTCGACT
AGCTAATTACTACTACTCCACTCCTTGCCATTAATTAGTATATACTCCATTATTTGCCAT
TTGCACATCATCGAGACGTCGCTTGTGACGTCCGTTTCAGTGCGTATATGCATGTTGTAC
TCCTCCTTACTTGATTACATGTATGCATGCAAATTAATGAATCAATCAATGGTCGGATTT
TCTATAT