Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0101300-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:115791:118965:-1 gene:Os03g0101300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Functioning in Cesium Over-transport 10 description:Similar to Hexose transporter. (Os03t0101300-01);Similar to Hexose transporter. (Os03t0101300-02)
Sequence

ATGGCCATCGGAGCGTTCGTCGAAGGAGGCGGCAGTGGGTACAGCGGGCGCGTGACTCCG
TTCGTGGTGCTGTCGTGCATCGTCGCCGGCAGCGGTGGCATCCTCTTCGGCTACGACCTC
GGCATCTCAGGTGGGGTAACGTCGATGGAGCCGTTCCTGAAGAAGTTCTTCCCGGACGTG
TACCATCAGATGAAGGGGGACAAGAAGAAGGTGAGCAACTACTGCCGCTTTGACAGCGAG
CTCCTCACCGTCTTCACCTCCTCCCTCTACATCGCCGGCCTCGTCGCCACTCTCGTCGCC
TCCTCCGTCACCAGGCGCTTCGGCCGCCGTGCCTCCATACTCATCGGCGGCTCCGTCTTC
GTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATGCTCATCCTCAACAGG
GTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGTCGATCCCGCTGTATCTGTCGGAG
ATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATC
GGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGG
TGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTG
TTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGG
GCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTG
ATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGG
TACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATC
AACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCG
TCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATG
GCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTG
GTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAG
ATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTC
GCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTG
CGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGC
CAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCC
TGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCC
ATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGAC
TCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAGATCATCATCAGAATAA

Peptide Sequence

PEP ID

Os03t0101300-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:115791:118965:-1 gene:Os03g0101300 transcript:Os03t0101300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Functioning in Cesium Over-transport 10 description:Similar to Hexose transporter. (Os03t0101300-01);Similar to Hexose transporter. (Os03t0101300-02)
Sequence

MAIGAFVEGGGSGYSGRVTPFVVLSCIVAGSGGILFGYDLGISGGVTSMEPFLKKFFPDV
YHQMKGDKKKVSNYCRFDSELLTVFTSSLYIAGLVATLVASSVTRRFGRRASILIGGSVF
VAGSVFGGAAVNIYMLILNRVLLGIGLGFTNQSIPLYLSEMAPPQHRGAINNGFELCISI
GILIANLINYGVDKIEGGWGWRISLSMAAVPAAFLTVGALFLPETPSFVIQRSGDVDSAR
ALLQRLRGTAAVHKELEDLVMASEVSKTIRHPLRNMLRRRYRPQLVIAVLVPLFNQVTGI
NVINFYAPVMFRTIGLRESASLMSAVVTRVCATAANVVAMAVVDRLGRRRLLLVGGVQML
VSQVMVGAILAGKFREHGEEMEKEYAYLVLSVMCVFVAGFAWSWGPLTYLVPAEICPLEV
RSAGQSIVIAVIFLLTFLIGQTFLAMLCHLKFATFFLFAACLCVMTLFVFFFLPETKQLP
MEQMDQLWRTHWFWKRIVGDSPQQQVVELHHHHQRSSSE

Transcript Sequence

Transcript ID

Os03t0101300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:115791:118965:-1 gene:Os03g0101300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Functioning in Cesium Over-transport 10 description:Similar to Hexose transporter. (Os03t0101300-01);Similar to Hexose transporter. (Os03t0101300-02)
Sequence

AGAAAGAAAGAAGATTATATATATTAACAATGGCCATCGGAGCGTTCGTCGAAGGAGGCG
GCAGTGGGTACAGCGGGCGCGTGACTCCGTTCGTGGTGCTGTCGTGCATCGTCGCCGGCA
GCGGTGGCATCCTCTTCGGCTACGACCTCGGCATCTCAGGTGGGGTAACGTCGATGGAGC
CGTTCCTGAAGAAGTTCTTCCCGGACGTGTACCATCAGATGAAGGGGGACAAGAAGAAGG
TGAGCAACTACTGCCGCTTTGACAGCGAGCTCCTCACCGTCTTCACCTCCTCCCTCTACA
TCGCCGGCCTCGTCGCCACTCTCGTCGCCTCCTCCGTCACCAGGCGCTTCGGCCGCCGTG
CCTCCATACTCATCGGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTG
TCAACATCTACATGCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCA
ACCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCA
ACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACG
GCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCC
CCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCC
AGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGG
CGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGC
ACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGG
TGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGT
TCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGT
GCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGC
TGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGG
CGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGA
GCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGG
TCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCG
TCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCA
AGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCT
TCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGC
ATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACC
ACCACCACCAAAGATCATCATCAGAATAAACAAACTAAATCACTAAACACGCCTTCCACC
TAAGTATATACGCATCATACCCTATATAATATAATATGCATGTATTAATTAACTGATGAT
CGACTGTATGCATAATGCATGTACACTACTACTACATATATACAACAGCAACAGTCAGCC
AGCCGCCCACAATAAGATCAGCCCAGCTCAATTGCACCTTAATTAGTTAATTAAGAGGCT
GATCACAAAATAATTACTCCATATGTGCAACCATTTGTGGCCTCACGCCTTGTTAACTCT
CTGTAACAGTATTACTATGCATATATATAATTTGCATAATGGAAGATGTTTCCTCTATAA
AGTTGTCCGTATTTAAATTGGTTGGACATCACCCATATCCAATCAACATGAGTCTAAGTT
AACTATTATACACCCCCTCTCAGCCTAGCCAACCCAACCCAATTGGCTCACCCCATCACA
CACACTGTCCCGCGCGCATTTGTATCCATCTGCTTTTTATTCCTTTTCCTTTTTTTTCTT
TGCTTATTAGTCAACGCTATTTTGATATATAATCAACGTCACTAATTATTAATTTGTAGA
CCGACACTATCGAGGGAGTAGATCTCGACCATGGTATTTGTAGAGTATGAGAATCGTTGG
TGCCAAGGTATACACGAGATTAAGGTAAGAGAGACTGGAGACAAGGACTTTTATATAAGT
TCAGTCCCCTTAACTTACAATTAATAGTTCTACTTCTATTGGCTGAAGCTGGTGTTGCCT
TCATGTATCAATATCTTACTAATACAATATTTGGGATGACCT