Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0101200-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:110522:114247:-1 gene:Os03g0101200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 93 description:Similar to U-box domain containing protein, expressed. (Os03t0101200-00)
Sequence	ATGGATCCTGATCCTCTTCCTCTCCTCTCCTTAGGGCATGTGAATGTGTCAGAGATGATG GCGCCTCCTCTCACTGTTGGATTGGCTCTCACTGACTCTAAATCCAGCACCTACGCCCTC CAATGGGCTTTGTCCAGGTTTAAGTTTACCAAAGATGACGACGCCCCCATCTTCCTTCTT ATTCATGTCCTCACTAAACTCTTGACAGTACCCACACCCATGGGGAACCATATCCCAATT GATAAAGTCCGAACCGATGTTGCTGATGCCTACTTCAAGGATGTACACCACCAGGCACAA CAAATGCTCCTCCTCTACAAAAACATGTGCCATCAAAACAAGGTGAAAGCTCAAGTATTG CTTATCAAGGGCAACGACGTGTCACAAACTGTTTCCACTGTTGTTTCTGACTATCAAATA AAGATCCTCATCGTCGGTGTCACTGCTAGGACTAGGAAGCCATTTGGAAATAGGACATCC TCCAAAATTTGCAAGAATGTCCCAAGCTTTTGCACAGCTTATCTTGTATCAAAAGATGGA TTGTCTTCGCTTTATTCTTCTTCATTAGAAAGTGACTTAGCGTCGAGCTCCAAGAGTGAT GATCTTTCAGATGAAATGTCTTCAAGCTCAGTAACTTCCAATAATAGTTCAGACCAGAGC CCGTTTGATTCTCCAAGGCTGCTAGGCTCCAACTTACCATCAGAGAACCCTAAAAATAGT TCCCCTGCACACCGTAACCGTTCACTTACTCTATACGATTATCTCAATGGAAGCACTTCA ATATATCCTGACAAGGATAGAAGAGTTAACTCTTCCACTGGTACGGAAAGCTCCAAACCT AGTGAACTGAAGGGGTCAAATGAGGTGCTAAGACAAGAAAGCTTGCTGCAGGGAATGCTT TCAGACAACAAGGACCATATCAGTACAGAGCTTGAAAAGCTAAGGCTTGAACTGAGGCTT ATACAGGGGAAACATAAACTTGTTCAGGATGAGTCCGATGATGCATCACGCCAGGCAAGT AAAATGGCTGAATTAGCTGCAAAGCGCATGGAAGAGGAAGCTCAACTAAGAGAGATACAA TCTAGGCTGGATAAGGCCAACGACAACGTAGAGAAGCAGAAGGCGCATCGATATGCTGCA GAGCAGGCGCTGAACCATGTGCAGGATCTTGTAAGAGGGGAGGTTATGCAGAAAAATATG CTGCAGGTGAAAGCATCCCGTGATGCTGATAAGAAGTTGAGACTGGAGAAGCTCTTTGTG CTTCAGGGCAACTCATACTCAACGTTTACATGGGAGGAGATTGATAACGCTACATCATCA TTCGCGGACAATCTCAAGATTGGAAGTGGAGCTAACGGAACAGTATATAAGGGGTATCTC AATCACTCAGCTGTGGCAATAAAGGTCCTCCATTCTGATGACAATTCCAGTAACAAGCAT TTCAGGCAAGAGCTTGAGGTTCTGGGGAAGATACATCACCCGCATCTGGTGATGCTCCTG GGAGCGTGTGTGGAGAGGGGGTGCCTGGTGTACGAGTACATGGAGAATGGCAGCCTGGAG GAGCGGCTGCGGTGCAAAAGCGGTACGGCGGCGCTGCCGTGGTGTGACCGGCTGCGCATC GCCTGGGAGGTTGCCTCTGCCCTTGTGTTCCTCCACAGCAGCAAACCAAACCCAATCATT CACCGGGACCTCAAGCCTGAGAACATCCTCCTGGACGGCAACCTGGTGAGCAAGGTTGGT GATGTGGGGCTGTCAACACTGGTGTCAAGTGGTAGTGGTGGCAGTAGCAGTACCATGTAC AAGAAGACGGCTCTGGCTGGGACGCTGTTCTACATAGACCCAGAGTACCAGAGGAGCGGG CAGGTGTCGGTGAAGTCGGACACGTACGCGCTTGGCATGGTGATGCTGCAGCTGCTCACG GCGAGGGCACCCATCGGGCTGGCGGAGGTGGTGGAGCGAGCGGTGGAGGACGGCAAGTTG AGGGACATCCTGGATGAGAATGCAGGGTGGACTTGGGCCATGGAAGAGGCGCAGGAGATG GCTGACCTAGCGCTCAGGTGCCTGGAGATGAGAGGCAAGGACCAGCCGTGCATCGCGTCG GACGGCTACTCGTACGAGCGCCACGCCATTGAGATGTGGGTGTGCGACAAGGATGTGTCT CCGGTCACCAATGTTCGGATGCCAAACAAGACACTTGTGCCCAACCGCTCTCTGCTCACC GCCATCACTGCCTGGAAGTCCCAGGGTGGCCGCAAACCCACAAATAAATTTGTTACTACT TCTCCGAATCATTTGTGA

Peptide Sequence

PEP ID	Os03t0101200-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:110522:114247:-1 gene:Os03g0101200 transcript:Os03t0101200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 93 description:Similar to U-box domain containing protein, expressed. (Os03t0101200-00)
Sequence	MDPDPLPLLSLGHVNVSEMMAPPLTVGLALTDSKSSTYALQWALSRFKFTKDDDAPIFLL IHVLTKLLTVPTPMGNHIPIDKVRTDVADAYFKDVHHQAQQMLLLYKNMCHQNKVKAQVL LIKGNDVSQTVSTVVSDYQIKILIVGVTARTRKPFGNRTSSKICKNVPSFCTAYLVSKDG LSSLYSSSLESDLASSSKSDDLSDEMSSSSVTSNNSSDQSPFDSPRLLGSNLPSENPKNS SPAHRNRSLTLYDYLNGSTSIYPDKDRRVNSSTGTESSKPSELKGSNEVLRQESLLQGML SDNKDHISTELEKLRLELRLIQGKHKLVQDESDDASRQASKMAELAAKRMEEEAQLREIQ SRLDKANDNVEKQKAHRYAAEQALNHVQDLVRGEVMQKNMLQVKASRDADKKLRLEKLFV LQGNSYSTFTWEEIDNATSSFADNLKIGSGANGTVYKGYLNHSAVAIKVLHSDDNSSNKH FRQELEVLGKIHHPHLVMLLGACVERGCLVYEYMENGSLEERLRCKSGTAALPWCDRLRI AWEVASALVFLHSSKPNPIIHRDLKPENILLDGNLVSKVGDVGLSTLVSSGSGGSSSTMY KKTALAGTLFYIDPEYQRSGQVSVKSDTYALGMVMLQLLTARAPIGLAEVVERAVEDGKL RDILDENAGWTWAMEEAQEMADLALRCLEMRGKDQPCIASDGYSYERHAIEMWVCDKDVS PVTNVRMPNKTLVPNRSLLTAITAWKSQGGRKPTNKFVTTSPNHL

Transcript Sequence

Transcript ID	Os03t0101200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:110522:114247:-1 gene:Os03g0101200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 93 description:Similar to U-box domain containing protein, expressed. (Os03t0101200-00)
Sequence	ATGGATCCTGATCCTCTTCCTCTCCTCTCCTTAGGGCATGTGAATGTGTCAGAGATGATG GCGCCTCCTCTCACTGTTGGATTGGCTCTCACTGACTCTAAATCCAGCACCTACGCCCTC CAATGGGCTTTGTCCAGGTTTAAGTTTACCAAAGATGACGACGCCCCCATCTTCCTTCTT ATTCATGTCCTCACTAAACTCTTGACAGTACCCACACCCATGGGGAACCATATCCCAATT GATAAAGTCCGAACCGATGTTGCTGATGCCTACTTCAAGGATGTACACCACCAGGCACAA CAAATGCTCCTCCTCTACAAAAACATGTGCCATCAAAACAAGGTGAAAGCTCAAGTATTG CTTATCAAGGGCAACGACGTGTCACAAACTGTTTCCACTGTTGTTTCTGACTATCAAATA AAGATCCTCATCGTCGGTGTCACTGCTAGGACTAGGAAGCCATTTGGAAATAGGACATCC TCCAAAATTTGCAAGAATGTCCCAAGCTTTTGCACAGCTTATCTTGTATCAAAAGATGGA TTGTCTTCGCTTTATTCTTCTTCATTAGAAAGTGACTTAGCGTCGAGCTCCAAGAGTGAT GATCTTTCAGATGAAATGTCTTCAAGCTCAGTAACTTCCAATAATAGTTCAGACCAGAGC CCGTTTGATTCTCCAAGGCTGCTAGGCTCCAACTTACCATCAGAGAACCCTAAAAATAGT TCCCCTGCACACCGTAACCGTTCACTTACTCTATACGATTATCTCAATGGAAGCACTTCA ATATATCCTGACAAGGATAGAAGAGTTAACTCTTCCACTGGTACGGAAAGCTCCAAACCT AGTGAACTGAAGGGGTCAAATGAGGTGCTAAGACAAGAAAGCTTGCTGCAGGGAATGCTT TCAGACAACAAGGACCATATCAGTACAGAGCTTGAAAAGCTAAGGCTTGAACTGAGGCTT ATACAGGGGAAACATAAACTTGTTCAGGATGAGTCCGATGATGCATCACGCCAGGCAAGT AAAATGGCTGAATTAGCTGCAAAGCGCATGGAAGAGGAAGCTCAACTAAGAGAGATACAA TCTAGGCTGGATAAGGCCAACGACAACGTAGAGAAGCAGAAGGCGCATCGATATGCTGCA GAGCAGGCGCTGAACCATGTGCAGGATCTTGTAAGAGGGGAGGTTATGCAGAAAAATATG CTGCAGGTGAAAGCATCCCGTGATGCTGATAAGAAGTTGAGACTGGAGAAGCTCTTTGTG CTTCAGGGCAACTCATACTCAACGTTTACATGGGAGGAGATTGATAACGCTACATCATCA TTCGCGGACAATCTCAAGATTGGAAGTGGAGCTAACGGAACAGTATATAAGGGGTATCTC AATCACTCAGCTGTGGCAATAAAGGTCCTCCATTCTGATGACAATTCCAGTAACAAGCAT TTCAGGCAAGAGCTTGAGGTTCTGGGGAAGATACATCACCCGCATCTGGTGATGCTCCTG GGAGCGTGTGTGGAGAGGGGGTGCCTGGTGTACGAGTACATGGAGAATGGCAGCCTGGAG GAGCGGCTGCGGTGCAAAAGCGGTACGGCGGCGCTGCCGTGGTGTGACCGGCTGCGCATC GCCTGGGAGGTTGCCTCTGCCCTTGTGTTCCTCCACAGCAGCAAACCAAACCCAATCATT CACCGGGACCTCAAGCCTGAGAACATCCTCCTGGACGGCAACCTGGTGAGCAAGGTTGGT GATGTGGGGCTGTCAACACTGGTGTCAAGTGGTAGTGGTGGCAGTAGCAGTACCATGTAC AAGAAGACGGCTCTGGCTGGGACGCTGTTCTACATAGACCCAGAGTACCAGAGGAGCGGG CAGGTGTCGGTGAAGTCGGACACGTACGCGCTTGGCATGGTGATGCTGCAGCTGCTCACG GCGAGGGCACCCATCGGGCTGGCGGAGGTGGTGGAGCGAGCGGTGGAGGACGGCAAGTTG AGGGACATCCTGGATGAGAATGCAGGGTGGACTTGGGCCATGGAAGAGGCGCAGGAGATG GCTGACCTAGCGCTCAGGTGCCTGGAGATGAGAGGCAAGGACCAGCCGTGCATCGCGTCG GACGGCTACTCGTACGAGCGCCACGCCATTGAGATGTGGGTGTGCGACAAGGATGTGTCT CCGGTCACCAATGTTCGGATGCCAAACAAGACACTTGTGCCCAACCGCTCTCTGCTCACC GCCATCACTGCCTGGAAGTCCCAGGGTGGCCGCAAACCCACAAATAAATTTGTTACTACT TCTCCGAATCATTTGTGA