Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0100040-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:19107:20472:1 gene:Os03g0100040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os03t0100040-01)
Sequence	ATGGCCTTCTTCGTCAAGATTTCGGCGCCGTGCTCGCTTGCCGGCCATGGCACCACCAGC AGTAGCAGTGGCAGCAGCAGGTCAAAGAGGGGATTGTTGCTTCCAGTTGGGGCTGGGGCT GGGGCTGGGGCCTACGGCGGCAGGCAGTACTCGGACGTGGTCCCGGTGCCAGCGCTATCG CAGGCGCAGGCGAGCTCTAGCGGTGGTCGGCTGCGCATCTTCTCCGGCACGGCGAACCCG AGGCTGGCGCAGGAGGTGGCGTGCTACCTGGGGATGGAGCTGGGGAGGGTGAAGATCAAG CGGTTCGCGGACGGGGAGCTGTACGTGCAGCTGCAGGAGAGCGTGCGTGGGTGCGACGTG TTCCTGGTGCAGCCCACCTGCCCGCCGGCAAACGAGAACCTGATGGAGCTCCTCATCATG ATCGACGCATGCCGCCGCGCCTCCGCCAAGACCATCACCGCCGTCGTGCCCTACTTCGGG TACGCCCGCGCCGACCGCAAGATGCGCGGCGGCCGGGAGTCGATCGCCGCCAAGCTGGTG GCCAACCTCATCACGGAGGCCGGCGCCCACCGCGTGCTGGCCTGCGACCTCCACTCGGGG CAGTCCATCGGCTACTTCGACATCCCCGTGGACCATGTGTACGGGCAGCCGGTGATCCTG GACTACCTGGCCAGCAAGACCATCTGCCCCGACGAGGTGGTGGTGGTGTCCCCGGACGTG GGTGGCGTCGCCCGGGCCCGCACCTTCGCCAAGAAGCTGTCGGACGCGCCGCTGGCCATC GTGGACAAGCGGCGGCAGGGGCACAACCAGTCGGAGGTGGTGCACCTCATCGGCGACGTC AGGGGGAAGGTGGCGGTGATGGTGGACGACATGATCGACACTGCGGGGACGGTGTCCCAG GGAGCGGAGCTGCTGCACAGGGAGGGCGCCAGGGCCGTCTACGCCTGCAGCACCCACGCC GTGCTCAGCCCGCCCGCCGTCGACAGGCTCTCCAGCGGCCTCTTCCAGGAGGTGATCGTC ACCAACACCGTCCCCGTGCTTCACCACCGGACCTTCCCCCAGCTCACCGTCCTCTCCGTC GCCAATCTCCTCGGCGAGACCATCTGGCGCGTTCACGACGACTGCTCTGTCAGTAGCATC TTCCAGTGA

Peptide Sequence

PEP ID	Os03t0100040-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:19107:20472:1 gene:Os03g0100040 transcript:Os03t0100040-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os03t0100040-01)
Sequence	MAFFVKISAPCSLAGHGTTSSSSGSSRSKRGLLLPVGAGAGAGAYGGRQYSDVVPVPALS QAQASSSGGRLRIFSGTANPRLAQEVACYLGMELGRVKIKRFADGELYVQLQESVRGCDV FLVQPTCPPANENLMELLIMIDACRRASAKTITAVVPYFGYARADRKMRGGRESIAAKLV ANLITEAGAHRVLACDLHSGQSIGYFDIPVDHVYGQPVILDYLASKTICPDEVVVVSPDV GGVARARTFAKKLSDAPLAIVDKRRQGHNQSEVVHLIGDVRGKVAVMVDDMIDTAGTVSQ GAELLHREGARAVYACSTHAVLSPPAVDRLSSGLFQEVIVTNTVPVLHHRTFPQLTVLSV ANLLGETIWRVHDDCSVSSIFQ

Transcript Sequence

Transcript ID	Os03t0100040-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:19107:20472:1 gene:Os03g0100040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os03t0100040-01)
Sequence	TGTGGAGAGGATACGTCGGTGGTTGGCCATGGCCTTCTTCGTCAAGATTTCGGCGCCGTG CTCGCTTGCCGGCCATGGCACCACCAGCAGTAGCAGTGGCAGCAGCAGGTCAAAGAGGGG ATTGTTGCTTCCAGTTGGGGCTGGGGCTGGGGCTGGGGCCTACGGCGGCAGGCAGTACTC GGACGTGGTCCCGGTGCCAGCGCTATCGCAGGCGCAGGCGAGCTCTAGCGGTGGTCGGCT GCGCATCTTCTCCGGCACGGCGAACCCGAGGCTGGCGCAGGAGGTGGCGTGCTACCTGGG GATGGAGCTGGGGAGGGTGAAGATCAAGCGGTTCGCGGACGGGGAGCTGTACGTGCAGCT GCAGGAGAGCGTGCGTGGGTGCGACGTGTTCCTGGTGCAGCCCACCTGCCCGCCGGCAAA CGAGAACCTGATGGAGCTCCTCATCATGATCGACGCATGCCGCCGCGCCTCCGCCAAGAC CATCACCGCCGTCGTGCCCTACTTCGGGTACGCCCGCGCCGACCGCAAGATGCGCGGCGG CCGGGAGTCGATCGCCGCCAAGCTGGTGGCCAACCTCATCACGGAGGCCGGCGCCCACCG CGTGCTGGCCTGCGACCTCCACTCGGGGCAGTCCATCGGCTACTTCGACATCCCCGTGGA CCATGTGTACGGGCAGCCGGTGATCCTGGACTACCTGGCCAGCAAGACCATCTGCCCCGA CGAGGTGGTGGTGGTGTCCCCGGACGTGGGTGGCGTCGCCCGGGCCCGCACCTTCGCCAA GAAGCTGTCGGACGCGCCGCTGGCCATCGTGGACAAGCGGCGGCAGGGGCACAACCAGTC GGAGGTGGTGCACCTCATCGGCGACGTCAGGGGGAAGGTGGCGGTGATGGTGGACGACAT GATCGACACTGCGGGGACGGTGTCCCAGGGAGCGGAGCTGCTGCACAGGGAGGGCGCCAG GGCCGTCTACGCCTGCAGCACCCACGCCGTGCTCAGCCCGCCCGCCGTCGACAGGCTCTC CAGCGGCCTCTTCCAGGAGGTGATCGTCACCAACACCGTCCCCGTGCTTCACCACCGGAC CTTCCCCCAGCTCACCGTCCTCTCCGTCGCCAATCTCCTCGGCGAGACCATCTGGCGCGT TCACGACGACTGCTCTGTCAGTAGCATCTTCCAGTGACCATTCATATACATATACACCAC GTACTCCATTAACTCAATTAATTTAGTACATTCCAAGCATACATCATGATATATACTCTC CTAGTAGCTTGAGAAACATTTGTACATACATAACGCATGGCAGCTCTAGCTAGCCTGCAT CCAGTTCTTCAGCAAGTTTTATGGCGCCGCCAGCTGCACCATCGGC