Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0833500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35847614:35850596:1 gene:Os02g0833500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA85 description:Cation/H+ exchanger domain containing protein. (Os02t0833500-01);Hypothetical conserved gene. (Os02t0833500-02)
Sequence

ATGGCAGGTGACGGTGCCAAGTGCTCCGACGAGGTGAACGACGGCACCTACTTCATGGCC
GGCGTGATGGCCGTGACCGGCCTCATGGCGACCGTCCTGGCGCTCTCCGGCATCTTCCAT
TGCGCGCTTCGACGCGTTGGGCAGCCAAGCATAATCTCGCACATCCTGGCCGGCGTGGTG
GTCGGGCCGACGGTGCTCGGCCGCGCCGTGGACCTGCGTCCTCTGGGCATGCAGGACGCC
GGCAGCGCGCTCAGCGACACCATCTACTTCGTCCGCATCATCTTCATGTTCTTCATCGGC
CTGGAGATGGACCTCCGGTACCTCCGCCACCACCTGCGCCGCTCCCTCGCCATCGCCTGC
GGCGGCTCGGGGCTCTGCCTCCTGCTCGCCGCCCTCGCGGGGCCCTTCTTCTACGGCCTC
CTCCACCCCGGCCAGGGCCCCTTCAAGCCCGAGAAGCTCTACGCCTCCACCGCGCTCTTC
ATGCTCGTCCTCACCACCACCGCCTCCCCGGTCCTCATCCGCATCGTCACCGAGCTCAAG
CTCACCGGCTCCGAGGCCGGCCAGCTCGCCATCGGCGCCGCCTTCGCCAACGACATGGCT
AGCCTCTCCGTCTTCAGCATCATGGTCGTCGGCACCACCGCCTACGGCCCCGACGGCCAG
CCCACCCCATCCTTCCCGGACATGTCCATCGTCATGTCCATGGCCTTCACGGCGTGCCTG
GCGGTGCTCGCGGCCGCCAGGGCCGCCAGGCTGCTCAACAGGCTCAAGCGCGGCCGCCGC
TACGTCAGCAAGTACGAGCTCTGCGCCATGCTCCTGCTCATCATCGCCCTCTCGCTGCTC
GAGCAGGTGTTCGGCTACAGCGCCTCCATGACCGCCTTCCTCATCGGCCTCGCCATGCCG
CGCGACGGGCCCACGGCGCGCACGCTCGTCGACCGCCTCACCTATCCCGTGCACCAGCTC
GTCATGCCGCTCTGCTTCGGGGCCATCGGCGCAAGGCTCGACTTCGCCGCCGTCGGCAGC
TTCACAGCCATGCAGTTCGCCGTCGCCGTCGCCTTCACGACGCTGCTCGGCGCAGTCGGG
AAGGTGGGCGGCACGGTGCTCGCGGGCCGCATGCTGGGCATCTCGGCGAGGGAGTCGCTG
GTGCTGGGCTTCCTGCTCAACGTCAAGGGCTACTGTGACATCCTCGCCATCAACTTCGGC
AACCAGGCCGGCATCTGGGGCCAGACGGCGCAGGTGGTGCTGCTCCTCTCCTCCATCCTC
AACACCTTCATGGCAGGCCCGGCTGCCGCGGCCATCGTCCGACAGCAGCGCGCCGCCTCC
CGATACCGGTCGCGCTGCCTTCAGGACCTCAAGGTCGACCACGAGCTCCGCGTGCTGGTC
TGCGTCCACGGCGCCGGGGGCGTCCACACCATGCTGACGCTCGCGGAGCTTTCCAAGGGC
ACCGCGCCGCTGGCCGTCTACCTCCTCCACCTGGTGGAGCTTATGGCCGCGCGCAAGTAC
GCCATCACCCATCTGTACCATGACGCCGACGCCGACGACGACGAGTGGGGTTATGCCCGC
GAGATCGAGCAGGTGGCCGCGGCGGTGAACACCTTCACCTACGACGCCGGCGTGCCGGTG
CGGCAGATGACCGCCATCTCCAGCCTGGGGTCCATGGACGCAGACGTGCGCAACGGCGTG
GAGGACTCGCGCGCGTCGCTGGTGATCGTGCCCTTCCACAAGGAGCAGCGGTACGACGGG
CGCATGGTGTGCCGGCGAGAGGGGAGGCGGCAGCTGAACCAGCGGATCCTGCAGCGCTTG
CCCTGCACTGTCGGGGTCCTGGTGGAACGGCGCCTCGGCGGGGGCGGCGACAAGGGCGCG
GAAGACGTGGTGAAGAACCAGGTGGTGGCGGTGTTCCTGGGCGGGCCGGACGACAGGGAG
GCGGTAGCGTACGCGACGCGGCTGGCGGCGCACCCGTGGGTGAGCGTGACGGTGGTGAGA
TTCCTTCCAGCGCGACAGGATGATATTACCATTGGCATTGATGAACAATTATTAGCCACC
ACCAAGAGCCATGGCGGTGAGGGCGCCATGGAGGTGGCGGTGGAGGACGAGGAGGCGATG
GCGGATGAGGAGTTCATGGCGGACGTGTACGCGAGGCTGGTGTTGGCGGGACAGGTGGAG
TACACGGAGAGGTACGTGAGCAACGGCGCGGAGATGGTGAATTCGTTGAGCGCCATGGTG
GGGACGTACTCGCTGTTCGTGGTGGGGAAGGGCGGCGGCGGCTCGGCGGCGGCGGCCATG
ACGAGCGGCATGGGAGGGCTACTGGAGGACGAGTGTCCGGAGCTGGGCCCCGTCGGGGAG
GTGCTGGCCTCCGACGACTTCACGGCCTGCGGCTCCGTGCTGGTGCTTCAGCAGCACAGC
GCGCATGTGCATCGCAGGATGAGGAGGTGGAATCCCAACATTCACATCACCACCACACCC
TCGTCGTCCGATCATCATAGCCACCCACCCTAG

Peptide Sequence

PEP ID

Os02t0833500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35847614:35850596:1 gene:Os02g0833500 transcript:Os02t0833500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA85 description:Cation/H+ exchanger domain containing protein. (Os02t0833500-01);Hypothetical conserved gene. (Os02t0833500-02)
Sequence

MAGDGAKCSDEVNDGTYFMAGVMAVTGLMATVLALSGIFHCALRRVGQPSIISHILAGVV
VGPTVLGRAVDLRPLGMQDAGSALSDTIYFVRIIFMFFIGLEMDLRYLRHHLRRSLAIAC
GGSGLCLLLAALAGPFFYGLLHPGQGPFKPEKLYASTALFMLVLTTTASPVLIRIVTELK
LTGSEAGQLAIGAAFANDMASLSVFSIMVVGTTAYGPDGQPTPSFPDMSIVMSMAFTACL
AVLAAARAARLLNRLKRGRRYVSKYELCAMLLLIIALSLLEQVFGYSASMTAFLIGLAMP
RDGPTARTLVDRLTYPVHQLVMPLCFGAIGARLDFAAVGSFTAMQFAVAVAFTTLLGAVG
KVGGTVLAGRMLGISARESLVLGFLLNVKGYCDILAINFGNQAGIWGQTAQVVLLLSSIL
NTFMAGPAAAAIVRQQRAASRYRSRCLQDLKVDHELRVLVCVHGAGGVHTMLTLAELSKG
TAPLAVYLLHLVELMAARKYAITHLYHDADADDDEWGYAREIEQVAAAVNTFTYDAGVPV
RQMTAISSLGSMDADVRNGVEDSRASLVIVPFHKEQRYDGRMVCRREGRRQLNQRILQRL
PCTVGVLVERRLGGGGDKGAEDVVKNQVVAVFLGGPDDREAVAYATRLAAHPWVSVTVVR
FLPARQDDITIGIDEQLLATTKSHGGEGAMEVAVEDEEAMADEEFMADVYARLVLAGQVE
YTERYVSNGAEMVNSLSAMVGTYSLFVVGKGGGGSAAAAMTSGMGGLLEDECPELGPVGE
VLASDDFTACGSVLVLQQHSAHVHRRMRRWNPNIHITTTPSSSDHHSHPP

Transcript Sequence

Transcript ID

Os02t0833500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35847614:35850596:1 gene:Os02g0833500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA85 description:Cation/H+ exchanger domain containing protein. (Os02t0833500-01);Hypothetical conserved gene. (Os02t0833500-02)
Sequence

GGTCCGGCGGGCCGGCGACGAGCATGGCAGGTGACGGTGCCAAGTGCTCCGACGAGGTGA
ACGACGGCACCTACTTCATGGCCGGCGTGATGGCCGTGACCGGCCTCATGGCGACCGTCC
TGGCGCTCTCCGGCATCTTCCATTGCGCGCTTCGACGCGTTGGGCAGCCAAGCATAATCT
CGCACATCCTGGCCGGCGTGGTGGTCGGGCCGACGGTGCTCGGCCGCGCCGTGGACCTGC
GTCCTCTGGGCATGCAGGACGCCGGCAGCGCGCTCAGCGACACCATCTACTTCGTCCGCA
TCATCTTCATGTTCTTCATCGGCCTGGAGATGGACCTCCGGTACCTCCGCCACCACCTGC
GCCGCTCCCTCGCCATCGCCTGCGGCGGCTCGGGGCTCTGCCTCCTGCTCGCCGCCCTCG
CGGGGCCCTTCTTCTACGGCCTCCTCCACCCCGGCCAGGGCCCCTTCAAGCCCGAGAAGC
TCTACGCCTCCACCGCGCTCTTCATGCTCGTCCTCACCACCACCGCCTCCCCGGTCCTCA
TCCGCATCGTCACCGAGCTCAAGCTCACCGGCTCCGAGGCCGGCCAGCTCGCCATCGGCG
CCGCCTTCGCCAACGACATGGCTAGCCTCTCCGTCTTCAGCATCATGGTCGTCGGCACCA
CCGCCTACGGCCCCGACGGCCAGCCCACCCCATCCTTCCCGGACATGTCCATCGTCATGT
CCATGGCCTTCACGGCGTGCCTGGCGGTGCTCGCGGCCGCCAGGGCCGCCAGGCTGCTCA
ACAGGCTCAAGCGCGGCCGCCGCTACGTCAGCAAGTACGAGCTCTGCGCCATGCTCCTGC
TCATCATCGCCCTCTCGCTGCTCGAGCAGGTGTTCGGCTACAGCGCCTCCATGACCGCCT
TCCTCATCGGCCTCGCCATGCCGCGCGACGGGCCCACGGCGCGCACGCTCGTCGACCGCC
TCACCTATCCCGTGCACCAGCTCGTCATGCCGCTCTGCTTCGGGGCCATCGGCGCAAGGC
TCGACTTCGCCGCCGTCGGCAGCTTCACAGCCATGCAGTTCGCCGTCGCCGTCGCCTTCA
CGACGCTGCTCGGCGCAGTCGGGAAGGTGGGCGGCACGGTGCTCGCGGGCCGCATGCTGG
GCATCTCGGCGAGGGAGTCGCTGGTGCTGGGCTTCCTGCTCAACGTCAAGGGCTACTGTG
ACATCCTCGCCATCAACTTCGGCAACCAGGCCGGCATCTGGGGCCAGACGGCGCAGGTGG
TGCTGCTCCTCTCCTCCATCCTCAACACCTTCATGGCAGGCCCGGCTGCCGCGGCCATCG
TCCGACAGCAGCGCGCCGCCTCCCGATACCGGTCGCGCTGCCTTCAGGACCTCAAGGTCG
ACCACGAGCTCCGCGTGCTGGTCTGCGTCCACGGCGCCGGGGGCGTCCACACCATGCTGA
CGCTCGCGGAGCTTTCCAAGGGCACCGCGCCGCTGGCCGTCTACCTCCTCCACCTGGTGG
AGCTTATGGCCGCGCGCAAGTACGCCATCACCCATCTGTACCATGACGCCGACGCCGACG
ACGACGAGTGGGGTTATGCCCGCGAGATCGAGCAGGTGGCCGCGGCGGTGAACACCTTCA
CCTACGACGCCGGCGTGCCGGTGCGGCAGATGACCGCCATCTCCAGCCTGGGGTCCATGG
ACGCAGACGTGCGCAACGGCGTGGAGGACTCGCGCGCGTCGCTGGTGATCGTGCCCTTCC
ACAAGGAGCAGCGGTACGACGGGCGCATGGTGTGCCGGCGAGAGGGGAGGCGGCAGCTGA
ACCAGCGGATCCTGCAGCGCTTGCCCTGCACTGTCGGGGTCCTGGTGGAACGGCGCCTCG
GCGGGGGCGGCGACAAGGGCGCGGAAGACGTGGTGAAGAACCAGGTGGTGGCGGTGTTCC
TGGGCGGGCCGGACGACAGGGAGGCGGTAGCGTACGCGACGCGGCTGGCGGCGCACCCGT
GGGTGAGCGTGACGGTGGTGAGATTCCTTCCAGCGCGACAGGATGATATTACCATTGGCA
TTGATGAACAATTATTAGCCACCACCAAGAGCCATGGCGGTGAGGGCGCCATGGAGGTGG
CGGTGGAGGACGAGGAGGCGATGGCGGATGAGGAGTTCATGGCGGACGTGTACGCGAGGC
TGGTGTTGGCGGGACAGGTGGAGTACACGGAGAGGTACGTGAGCAACGGCGCGGAGATGG
TGAATTCGTTGAGCGCCATGGTGGGGACGTACTCGCTGTTCGTGGTGGGGAAGGGCGGCG
GCGGCTCGGCGGCGGCGGCCATGACGAGCGGCATGGGAGGGCTACTGGAGGACGAGTGTC
CGGAGCTGGGCCCCGTCGGGGAGGTGCTGGCCTCCGACGACTTCACGGCCTGCGGCTCCG
TGCTGGTGCTTCAGCAGCACAGCGCGCATGTGCATCGCAGGATGAGGAGGTGGAATCCCA
ACATTCACATCACCACCACACCCTCGTCGTCCGATCATCATAGCCACCCACCCTAGCTAT
ATACTACTTCATCTCCGACGACAACATCATCCATGGCGCCATGCATAGAACAAATTAATT
AAGAGGAGTACGTGTGGCACGCAATGGCTAGCTGGTTGGACTGGATCGACCTAGCTAGAA
CGGGGCCGGGTTGACATTGCACCGATCGATCGATCGATGATCTGCATCTAATTGCCATGG
GAAATTCAGTTGGTTTTAGGGTAAAAATCATATGCACCCGTGTCACGCATATACGCCATG
ACCCCATGTGTGGGGATAGATGAGTGAGTATATGTACCGATCGAAATAAACAGACTCGAT
TTTGAGGTTGGAATGTTTTTTTT