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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0833400-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:35842510:35845041:-1 gene:Os02g0833400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0833400-01);Hypothetical conserved gene. (Os02t0833400-02);Similar to predicted protein. (Os02t0833400-03)
Sequence

ATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGCCACGGCCGCAA
ACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCCGCTTCGTCGGC
CTCCGCCTCGCGCGCGCAGCCGCCGATTCGCAGGGGCCCAACGGCGCTGCCCCTGGATCT
GGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCAAATTGCCAAAG
AACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGTTTATGGAGCTC
TTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGGTGACTAATATG
ATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTGCTGAAAATCTA
GCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATGCGCAGTATCGT
CTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACC

Peptide Sequence

PEP ID

Os02t0833400-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:35842510:35845041:-1 gene:Os02g0833400 transcript:Os02t0833400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0833400-01);Hypothetical conserved gene. (Os02t0833400-02);Similar to predicted protein. (Os02t0833400-03)
Sequence

MSPSLLLTSRGTHSPAPRPQTRRASQLLVSFPSRCSRFVGLRLARAAADSQGPNGAAPGS
GSGGDGEGKAANGADTKLPKNRRDILLEYVKNVQPEFMELFIKRAPPQVVDAMRQTVTNM
IGTLPPQFFAVTVTTVAENLAQLMYSVLMTGYMFRNAQYRLELQQSLEQIALPE

Transcript Sequence

Transcript ID

Os02t0833400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35842510:35845041:-1 gene:Os02g0833400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0833400-01);Hypothetical conserved gene. (Os02t0833400-02);Similar to predicted protein. (Os02t0833400-03)
Sequence

ATCGCCACGCCATGTCTCCCTCCCTCTTGCTTACCTCTAGGGGTACCCACTCGCCGGCGC
CACGGCCGCAAACCCGTCGAGCATCACAACTGCTCGTCTCTTTCCCCTCGCGCTGCAGCC
GCTTCGTCGGCCTCCGCCTCGCGCGCGCAGCCGCCGATTCGCAGGGGCCCAACGGCGCTG
CCCCTGGATCTGGATCTGGTGGGGACGGAGAGGGCAAGGCAGCCAATGGTGCCGACACCA
AATTGCCAAAGAACCGGAGGGACATACTCCTGGAATACGTTAAAAATGTCCAGCCAGAGT
TTATGGAGCTCTTCATAAAAAGAGCTCCGCCACAGGTTGTTGATGCCATGCGCCAAACGG
TGACTAATATGATTGGGACTCTGCCACCTCAATTTTTCGCTGTAACTGTGACAACGGTTG
CTGAAAATCTAGCTCAGCTTATGTACAGTGTTCTGATGACCGGATACATGTTCAGGAATG
CGCAGTATCGTCTGGAATTGCAACAGAGTTTGGAGCAGATTGCCCTTCCAGAACC