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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0832200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35784843:35787721:-1 gene:Os02g0832200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OEP21 description:Similar to chloroplast channel forming outer membrane protein. (Os02t0832200-01)
Sequence

ATGGAGACTTCTCTGCGGCTGCGCGGCGGCGGGTCACGTCCGCAGTCAAAGTCACAGGAG
GGCCTCCGCATCCACGCCAAGGAGAAGCTCCCCATCGCCTCCAACGCGCTCCTCCAGGCT
CACGGCGAGATCCACGCCGCCACCGGCGCCCCGACCTATCTCGCCCTCCTCTTCAGGAAC
TTCTATCCCCGTCTCTCCGCCAATCTAGGCCTAGGCCTCGCCATCCACTTCCGCAACAAC
CAACCACTACCACTAGCATGGGACAACTTCTCCTACACCCTCCGTGCCAGCAAGGCTATC
ATCCCCTTCCCCTCCAACGCCTTGCTCGGGATCAACCTCAAGGGACGCCTCCTCGCCGAC
AAATACTTCAACCCGACCGCCCGGACTGCTGCCGTCGAGTTAGCATGGACCATACTTGAT
CTCAAAAGGGGTCAAGATGTCAGGCTCAAACTTGGATATCAACTCTTGCACAAGATGCCT
TATTTCCAACTCAGGGAAAACAATTGGACTTTTAATGCTTATATGGATGGAAAATGGGAT
GTTAGGTTTGATCTGTGA

Peptide Sequence

PEP ID

Os02t0832200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35784843:35787721:-1 gene:Os02g0832200 transcript:Os02t0832200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OEP21 description:Similar to chloroplast channel forming outer membrane protein. (Os02t0832200-01)
Sequence

METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN
FYPRLSANLGLGLAIHFRNNQPLPLAWDNFSYTLRASKAIIPFPSNALLGINLKGRLLAD
KYFNPTARTAAVELAWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENNWTFNAYMDGKWD
VRFDL

Transcript Sequence

Transcript ID

Os02t0832200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35784843:35787721:-1 gene:Os02g0832200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OEP21 description:Similar to chloroplast channel forming outer membrane protein. (Os02t0832200-01)
Sequence

AGCTGCGGCATGGAGACTTCTCTGCGGCTGCGCGGCGGCGGGTCACGTCCGCAGTCAAAG
TCACAGGAGGGCCTCCGCATCCACGCCAAGGAGAAGCTCCCCATCGCCTCCAACGCGCTC
CTCCAGGCTCACGGCGAGATCCACGCCGCCACCGGCGCCCCGACCTATCTCGCCCTCCTC
TTCAGGAACTTCTATCCCCGTCTCTCCGCCAATCTAGGCCTAGGCCTCGCCATCCACTTC
CGCAACAACCAACCACTACCACTAGCATGGGACAACTTCTCCTACACCCTCCGTGCCAGC
AAGGCTATCATCCCCTTCCCCTCCAACGCCTTGCTCGGGATCAACCTCAAGGGACGCCTC
CTCGCCGACAAATACTTCAACCCGACCGCCCGGACTGCTGCCGTCGAGTTAGCATGGACC
ATACTTGATCTCAAAAGGGGTCAAGATGTCAGGCTCAAACTTGGATATCAACTCTTGCAC
AAGATGCCTTATTTCCAACTCAGGGAAAACAATTGGACTTTTAATGCTTATATGGATGGA
AAATGGGATGTTAGGTTTGATCTGTGATCAAAAGGCAATGAATGGAGGATGGATGTTGCA
TCGTGAGAAGAACCGGAGGACCGGATAGCATGCTGTTGGGCACATTGGAATGCACGGCCG
ATTTCTCATCCTTAAACAAGTAAGTGGTACTACTTTTAATTGGATGAGTTCATAATTGAA
AACCATTTGTGCAGTTGTATTTGGGTCACCTGTTGTAGCTCGTTAATGCCTTCTGTGTGT
TGTGGACCCTGTCAGTTGGACTGAGAATATATAGATTCAGGTGTGAGC