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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0832150-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:35783494:35784085:-1 gene:Os02g0832150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to zinc finger (C3HC4-type RING finger) family protein. (Os02t0832150-00)
Sequence

ATGCGAGTTCTCGTCCACTCCGCCGAGTCCCCGGCAACACCGGCGGCGGCCATCTCCATC
GACTCGGACATGGTGGTCATCCTGGCCTCCCTCCTCTGCGCCCTCATCTGCGTCGCCGGC
CTGGCCCTCGTGGCCCGCTGTGCCTGCCGCCGCCGAGGCGCCGCTACCACCACCACCACC
ACTACTACTACACCGGCTGCTACATCCCCTGCACCCAAAGGCCTGAAGAAGAAAGCCATC
GACGCGCTCCCCACCGTGTCCTTCGCACTCAAGCAGCAGCAGCAGCAGGCGGAGTGCGCC
ATCTGCCTGGCTGAGTTCGCCGGGGGGGAGGAGCTACGCTTGCTGCCGCACTGCGGCCAC
GCCTTCCACGTCTCCTGCATCGATACGTGGCTGGGGACCCACGCCACCTGCCCCTCCTGC
CGCGCCACCGTCGGGACTAGTACATTATTCCTCCCTCTCCCCGGCCGCTGCCGGAGGTGC
GGGGAGGTCGACCTGCCCACGCTGCACGATTTCTCCACCGCCACCGCCACCGCCCACCAC
AACACACCTCCCTAG

Peptide Sequence

PEP ID

Os02t0832150-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:35783494:35784085:-1 gene:Os02g0832150 transcript:Os02t0832150-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to zinc finger (C3HC4-type RING finger) family protein. (Os02t0832150-00)
Sequence

MRVLVHSAESPATPAAAISIDSDMVVILASLLCALICVAGLALVARCACRRRGAATTTTT
TTTTPAATSPAPKGLKKKAIDALPTVSFALKQQQQQAECAICLAEFAGGEELRLLPHCGH
AFHVSCIDTWLGTHATCPSCRATVGTSTLFLPLPGRCRRCGEVDLPTLHDFSTATATAHH
NTPP

Transcript Sequence

Transcript ID

Os02t0832150-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35783494:35784085:-1 gene:Os02g0832150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to zinc finger (C3HC4-type RING finger) family protein. (Os02t0832150-00)
Sequence

AGGCCGAGGCGGCTCCATCCAAGTCGAGCAGAAAAGAATGCGAGTTCTCGTCCACTCCGC
CGAGTCCCCGGCAACACCGGCGGCGGCCATCTCCATCGACTCGGACATGGTGGTCATCCT
GGCCTCCCTCCTCTGCGCCCTCATCTGCGTCGCCGGCCTGGCCCTCGTGGCCCGCTGTGC
CTGCCGCCGCCGAGGCGCCGCTACCACCACCACCACCACTACTACTACACCGGCTGCTAC
ATCCCCTGCACCCAAAGGCCTGAAGAAGAAAGCCATCGACGCGCTCCCCACCGTGTCCTT
CGCACTCAAGCAGCAGCAGCAGCAGGCGGAGTGCGCCATCTGCCTGGCTGAGTTCGCCGG
GGGGGAGGAGCTACGCTTGCTGCCGCACTGCGGCCACGCCTTCCACGTCTCCTGCATCGA
TACGTGGCTGGGGACCCACGCCACCTGCCCCTCCTGCCGCGCCACCGTCGGGACTAGTAC
ATTATTCCTCCCTCTCCCCGGCCGCTGCCGGAGGTGCGGGGAGGTCGACCTGCCCACGCT
GCACGATTTCTCCACCGCCACCGCCACCGCCCACCACAACACACCTCCCTAG