Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0832000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:35775030:35777287:1 gene:Os02g0832000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 6 description:Similar to Calmodulin-like-domain protein kinase CPK2. (Os02t0832000-01)
Sequence	ATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGACCTCACCGTCCTTG GTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTAGTACAAGCACAGCA ACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGCTGTCGTCCCCGACG GCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGGTGGGGCGGAAGCTG GGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGACGGGGGCGGAGTAC GCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACGTGGAGGACGTGCGG CGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGGTGACCATCCAGGGC GCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCGAGGGCGGGGAGCTG TTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCGCGGAGATCACGCGC GTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGCACCGCGACCTCAAG CCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCCTCGCTCAAGGCCATCGACTTC GGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGGTGGGGAGCCCCTAC TACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGGACGTGTGGACGGCG GGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGGCGGAGACGCAGCAG GGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCGACCCATGGCCCACC ATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCCCGCCCAGGGAACGC CTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACGGCGTCGCCCCCGAC CGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCGCCATGAACAGGCTC AAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGGAGCTCGCTGGCCTC AAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCACCTTCGACGAGCTC AAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGATCAGGGATCTCATG GACGCCGCCGACGTTGACAAAAGCGGCACCATCGACTACGACGAGTTCATCGCCGCCACC GTCCACCTCAACAAGCTGGAGCGCGAGGAGCACCTGCTCGCCGCCTTCGCCTACTTCGAC CGCGACGGCAGCGGCTACATCACCGTCGACGAGCTCGAGCACGCCTGCAGGGACCACAAC ATGGCCGACGTTGGCATCGACGACATCATCCGCGAAGTCGACCAAGACAACGACGGCCGC ATCGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCGATATCATCGGCAAC GGAAGGCTCACCATTGGAAGGCCAACTACGGCTACTTCCGACGATCCTTCTCCAACAATC TCTTCTTCCTCTAGATGA

Peptide Sequence

PEP ID	Os02t0832000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:35775030:35777287:1 gene:Os02g0832000 transcript:Os02t0832000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 6 description:Similar to Calmodulin-like-domain protein kinase CPK2. (Os02t0832000-01)
Sequence	MGNYYSCGASSTSSPTSPSLVDYYYCYHRYPSSCSSTSTATSSGGRMPIRSHQQRLSSPT AVLGHETPALREVYTVGRKLGQGQFGTTYLCTQVSTGAEYACKSIAKRKLLSPEDVEDVR REIQIMHHLAGHGSVVTIQGAYEDNLYVHIVMELCEGGELFDRIVERGYFSERKAAEITR VIVGVVEACHSLGVMHRDLKPENFLLKESSSSSSLKAIDFGLSVFFKPGQVFSDVVGSPY YVAPEVLCKHYGPEADVWTAGVIVYILLSGVPPFWAETQQGIFDAVLRGSLDFDSDPWPT ISDSAKDLIRRMLRSPPRERLTAHQVLCHPWVCDDGVAPDRPLAPAVLSRLKQFSAMNRL KKMALRVIARNLSEEELAGLKEMFKAMDTDASGAITFDELKEGLRRYGSNLREAEIRDLM DAADVDKSGTIDYDEFIAATVHLNKLEREEHLLAAFAYFDRDGSGYITVDELEHACRDHN MADVGIDDIIREVDQDNDGRIDYGEFVAMMKKGAIDIIGNGRLTIGRPTTATSDDPSPTI SSSSR

Transcript Sequence

Transcript ID	Os02t0832000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35775030:35777287:1 gene:Os02g0832000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 6 description:Similar to Calmodulin-like-domain protein kinase CPK2. (Os02t0832000-01)
Sequence	AGATCGACTCCGATCGACGCCTCCGCTTGACGGAAGGAAACAGAGGGGAAGAGAGAGGAT CGTCGTCGACGATGATGCGGCGGCGGCTGGGCTGAAAGAGAAACAGCATCTCTTGAGGAT CGTCGTTTCGTTGCATGGGCAACTACTACTCGTGCGGCGCCTCGTCCACGTCCAGCCCGA CCTCACCGTCCTTGGTCGACTACTACTACTGCTATCATCGGTATCCAAGCAGTTGCAGTA GTACAAGCACAGCAACAAGTAGCGGGGGGAGGATGCCGATCCGCAGCCACCAGCAGAGGC TGTCGTCCCCGACGGCGGTGCTGGGGCACGAGACGCCGGCGCTGCGGGAGGTGTACACGG TGGGGCGGAAGCTGGGGCAGGGGCAGTTCGGGACGACGTACCTGTGCACGCAGGTGTCGA CGGGGGCGGAGTACGCGTGCAAGTCGATCGCGAAGAGGAAGCTGCTGAGCCCGGAGGACG TGGAGGACGTGCGGCGGGAGATACAGATAATGCACCACCTGGCGGGGCACGGGAGCGTGG TGACCATCCAGGGCGCGTACGAGGACAACCTGTACGTGCACATCGTGATGGAGCTGTGCG AGGGCGGGGAGCTGTTCGACCGCATCGTGGAGCGCGGCTACTTCTCGGAGCGCAAGGCCG CGGAGATCACGCGCGTCATCGTCGGGGTGGTGGAGGCGTGCCACTCCCTGGGCGTCATGC ACCGCGACCTCAAGCCCGAGAACTTCCTCCTCAAGGAATCCTCCTCCTCCTCCTCGCTCA AGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGGCAGGTGTTCAGCGACGTGG TGGGGAGCCCCTACTACGTGGCGCCGGAGGTGCTGTGCAAGCACTACGGCCCCGAGGCGG ACGTGTGGACGGCGGGCGTCATCGTCTACATCCTCCTCAGCGGGGTGCCCCCCTTCTGGG CGGAGACGCAGCAGGGCATCTTCGACGCCGTCCTCCGGGGATCCCTCGACTTCGACTCCG ACCCATGGCCCACCATCTCCGACAGCGCCAAGGACCTCATCCGCCGCATGCTCCGCTCCC CGCCCAGGGAACGCCTCACCGCCCACCAGGTGCTTTGCCACCCCTGGGTCTGCGACGACG GCGTCGCCCCCGACCGCCCCCTCGCCCCCGCCGTCCTCTCCCGCCTCAAGCAGTTCTCCG CCATGAACAGGCTCAAGAAGATGGCGCTGCGTGTCATCGCCCGGAACCTCTCCGAGGAGG AGCTCGCTGGCCTCAAGGAGATGTTCAAGGCCATGGACACCGACGCCAGCGGCGCCATCA CCTTCGACGAGCTCAAGGAAGGACTCCGCAGATACGGCTCCAACCTCAGGGAGGCTGAGA TCAGGGATCTCATGGACGCCGCCGACGTTGACAAAAGCGGCACCATCGACTACGACGAGT TCATCGCCGCCACCGTCCACCTCAACAAGCTGGAGCGCGAGGAGCACCTGCTCGCCGCCT TCGCCTACTTCGACCGCGACGGCAGCGGCTACATCACCGTCGACGAGCTCGAGCACGCCT GCAGGGACCACAACATGGCCGACGTTGGCATCGACGACATCATCCGCGAAGTCGACCAAG ACAACGACGGCCGCATCGACTACGGCGAGTTCGTCGCAATGATGAAGAAGGGCGCTATCG ATATCATCGGCAACGGAAGGCTCACCATTGGAAGGCCAACTACGGCTACTTCCGACGATC CTTCTCCAACAATCTCTTCTTCCTCTAGATGATGCATCAACGCCAAACAAACAAACAATG CAAATATGGTTCCCAATTACTTCAATTCACAACTCCGACTCACGGATCGCTCGCATGGCA TGCTAGCTAGTAGCATATACTCTATACTCTCAAGATTCATCATTCTTTTTATACCATGCA TACAGCTGATTATTTCTTGGGATAGAATAAAATTAAGGGCATATACCTCCAGAGATCGAT CAATCTATGCATGTATATGGTTTTGTTGCGGATACATGCATGCCAACGGAAGCAATTTGT ATATGTGGGTACCTGATCCAAGAGAGTGCATATAAAGCAATTTTTCCTGTGT