Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0831600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:35761332:35768388:-1 gene:Os02g0831600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1C description:AGO1 homologous protein. (Os02t0831600-01)
Sequence	ATGGCCTCACGGAGGCCAACGCACCGCCACCATACCGAGGCTCCAGATCCTGGTGGAAGA GGGAGAGGGAGAGGCCGTGCCGCCCGATATGCTCAGCCTCAGCCTCAGCCTCAGCAGCAG CAGCAGCAGCAAGGACGAGGATGCCGTGCTAGAGGTGCCTCGCCGCCGCCGCCGCCGCAG CAGCAGCAGCAGCAACAGCCAAGGTCTACTCCTACTCGTGCTACCACTGTCACCGTGGCT TCCTCTTCATCTACCACGGCCACCGCATCATCAAGCCCTCTAGCTCCCGAGCTGCGCCAA GCAATAATGGAAGCTCCCCGTCCCAGTGAGCTCGCTCAACCCTCACCCACTCCGCCTCAG GAACAACCTGTGGATGCCGCTACCACGACGCCGCACCATATTCCATCCTCAAGCAAGTCA ATTAGGTTTCCTTTGCGCCCGGGGAAGGGTACCATTGGCACCAGGTGCATGGTCAAGGCC AATCATTTCTTCGCTCACCTGCCCAACAAGGATCTTCATCACTACGATGTCTCCATCACT CCAGAAGTTACATCACGCATTGTTAACCGAGCTGTGATCAAGGAGCTGGTAAATCTGTAC AAGGCATCTTATCTGGGTGGGAGGCTGCCTGCATATGATGGTAGAAAGAGCTTATACACG GCTGGCCCATTGCCGTTTACTTCACAGGAGTTTCAGATCACTTTACTTGACGACGATGAT GGTTCTGGTTCTGAGAGGCGACAGAGGACTTTCCGAGTAGTAATCAAGTTCGCCGCACGG GCCGACCTTCACCGGCTTGAGTTGTTTTTAGCTGGGAGGCACGCAGAAGCTCCACAGGAG GCACTGCAAGTTCTTGATATTGTGCTGCGAGAGCTACCATCAGCAAGATATGCGCCATTT GGACGTTCCTTCTTTTCGCCTTACTTGGGTAGGAGGCAACCCCTTGGTGAGGGATTGGAA AGCTGGCGTGGATTTTACCAGAGCATTCGGCCTACTCAGATGGGCTTATCACTGAATATT GATATGTCAGCTACAGCTTTCATTGAGCCGTTACCTGTTATTGATTTTGTTGCACAACTA TTGAATTCTGACATCCATTCAAGGCCGCTTTCTGATGCCGAACGTGTTAAGATCAAGAAA GCCTTGAGAGGAGTAAAGGTGGAAGTTACCCACCGTGGCAACATGAGGCGGAAGTACCGG ATATCTGGTTTGACAATTCAGCCAACTCGTGAGCTAACTTTTCCTGTTGATGAAGGAGGC ACAGTGAAGTCAGTTGTACAGTACTTTCAAGAGACATATGGCTTTGCCATCCAACACACC TACCTTCCATGCCTTACAGTTCAGCGATTAAATTACCTGCCTATGGAGGTCTGCAAAATA GTGGAAGGACAGAGATACTCCAAGAGATTAAATCAGAATCAGATAAGAGCTCTTTTGGAG GAGACATGCCAACACCCACGTGATCGGGAGCGTGATATTATTAAGATGGTTAAACATAAC GCTTATCAGGATGATCCTTACGCAAAAGAGTTTGGCATTAAGATAAGTGATCGTCTGGCA TCAGTAGAGGCACGAATTTTACCGGCTCCACGGCTTAAGTACAATGAGACTGGTCGAGAG AAGGATTGCTTACCAAGAGTTGGTCAATGGAATATGATGAACAAGAAAATGGTAAATGGT GGTAAAGTCAGAAGCTGGATGTGCGTCAATTTTGCCCGTAATGTGCAGGAAAGTGTTGTT CGTGGGTTCTGCCATGAACTTGCTCTGATGTGTCAAGCCTCAGGAATGGATTTCGCTCCA GAACCTATTCTTCCACCACTAAATGCACATCCAGATCAAGTGGAGCGTGCTCTAAAAGCT AGGTATCATGATGCAATGAACGTTCTTGGACCCCAGCGCAGGGAACTTGATTTGCTTATT GGGATACTACCTGATAACAATGGCTCGCTTTATGGTGATTTGAAGCGCGTGTGTGAAATA GATCTTGGAATAGTTTCACAATGCTGTTGCACGAAGCAGGTGTTCAAAATGAACAAACAA ATTCTTGCAAATCTTGCTCTGAAGATAAATGTCAAGGTTGGGGGCAGGAACACTGTGCTG GTGGATGCTGTGTCAAGGCGTATTCCTCTGGTAACCGACAGACCTACAATTATATTTGGT GCTGATGTTACCCATCCTCATCCTGGAGAGGACAGCAGTCCCTCAATTGCTGCTGTTGTA GCCTCCCAAGATTGGCCTGAGGTGACAAAGTATGCTGGGTTGGTTTCTGCTCAAGCCCAC CGACAAGAGCTGATAGAAGATCTATATAAAATCTGGCAGGATCCACAGAGAGGAACAGTT AGTGGTGGCATGATCCGTGAGCTGCTTATATCCTTCAAAAGATCAACTGGTGAGAAGCCC CAGCGAATAATATTTTACAGGGATGGCGTTAGTGAAGGCCAATTTTACCAAGTTCTACTT TATGAATTGAATGCAATCCGAAAAGCATGTGCCTCCCTGGAGACAAATTACCAACCAAAG GTGACTTTCATTGTGGTTCAGAAACGTCACCACACAAGATTATTTGCACATAATCACAAC GATCAGAACTCAGTTGACAGGAGCGGGAACATACTCCCTGGTACGGTTGTAGATTCAAAG ATCTGTCATCCAACTGAGTTTGACTTCTACCTGTGTAGCCATGCTGGCATTAAGGGTACT AGTCGTCCAGCTCATTATCATGTCTTGTGGGATGAAAACAACTTCACAGCTGATGCATTG CAGATTCTTACCAACAACCTTTGCTACACCTATGCAAGGTGCACTCGCTCTGTATCAATT GTTCCACCTGCTTATTATGCTCATCTGGCTGCCTTCCGTGCTCGTTTCTATATGGAACCA GATACATCTGACAGCAGCTCTGTCGTTAGTGGGCCTGGTGTACGTGGGCCACTTTCTGGC TCATCAACATCACGTACTCGGGCCCCTGGTGGTGCAGCTGTTAAGCCACTTCCTGCTCTG AAGGATAGTGTGAAGAGGGTCATGTTCTACTGCTGA

Peptide Sequence

PEP ID	Os02t0831600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:35761332:35768388:-1 gene:Os02g0831600 transcript:Os02t0831600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1C description:AGO1 homologous protein. (Os02t0831600-01)
Sequence	MASRRPTHRHHTEAPDPGGRGRGRGRAARYAQPQPQPQQQQQQQGRGCRARGASPPPPPQ QQQQQQPRSTPTRATTVTVASSSSTTATASSSPLAPELRQAIMEAPRPSELAQPSPTPPQ EQPVDAATTTPHHIPSSSKSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHHYDVSIT PEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDD GSGSERRQRTFRVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYAPF GRSFFSPYLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDFVAQL LNSDIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTIQPTRELTFPVDEGG TVKSVVQYFQETYGFAIQHTYLPCLTVQRLNYLPMEVCKIVEGQRYSKRLNQNQIRALLE ETCQHPRDRERDIIKMVKHNAYQDDPYAKEFGIKISDRLASVEARILPAPRLKYNETGRE KDCLPRVGQWNMMNKKMVNGGKVRSWMCVNFARNVQESVVRGFCHELALMCQASGMDFAP EPILPPLNAHPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDNNGSLYGDLKRVCEI DLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFG ADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTV SGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPK VTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGT SRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP DTSDSSSVVSGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC

Transcript Sequence

Transcript ID	Os02t0831600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35761332:35768388:-1 gene:Os02g0831600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1C description:AGO1 homologous protein. (Os02t0831600-01)
Sequence	GTCTTCTTCCTTCCTCGGCCCGGCCTCGCTCGCTGCCTGCCAGCTGCAGCTGCAACTCTC CATCCATCGATCGATCTCCTCCTACTCCCCCGCCGCCGCCCCGTCCAAGACAAGCCAAGC CAGCCACCACTCCCTGCATGCCATGGCCTCACGGAGGCCAACGCACCGCCACCATACCGA GGCTCCAGATCCTGGTGGAAGAGGGAGAGGGAGAGGCCGTGCCGCCCGATATGCTCAGCC TCAGCCTCAGCCTCAGCAGCAGCAGCAGCAGCAAGGACGAGGATGCCGTGCTAGAGGTGC CTCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAACAGCCAAGGTCTACTCCTACTCG TGCTACCACTGTCACCGTGGCTTCCTCTTCATCTACCACGGCCACCGCATCATCAAGCCC TCTAGCTCCCGAGCTGCGCCAAGCAATAATGGAAGCTCCCCGTCCCAGTGAGCTCGCTCA ACCCTCACCCACTCCGCCTCAGGAACAACCTGTGGATGCCGCTACCACGACGCCGCACCA TATTCCATCCTCAAGCAAGTCAATTAGGTTTCCTTTGCGCCCGGGGAAGGGTACCATTGG CACCAGGTGCATGGTCAAGGCCAATCATTTCTTCGCTCACCTGCCCAACAAGGATCTTCA TCACTACGATGTCTCCATCACTCCAGAAGTTACATCACGCATTGTTAACCGAGCTGTGAT CAAGGAGCTGGTAAATCTGTACAAGGCATCTTATCTGGGTGGGAGGCTGCCTGCATATGA TGGTAGAAAGAGCTTATACACGGCTGGCCCATTGCCGTTTACTTCACAGGAGTTTCAGAT CACTTTACTTGACGACGATGATGGTTCTGGTTCTGAGAGGCGACAGAGGACTTTCCGAGT AGTAATCAAGTTCGCCGCACGGGCCGACCTTCACCGGCTTGAGTTGTTTTTAGCTGGGAG GCACGCAGAAGCTCCACAGGAGGCACTGCAAGTTCTTGATATTGTGCTGCGAGAGCTACC ATCAGCAAGATATGCGCCATTTGGACGTTCCTTCTTTTCGCCTTACTTGGGTAGGAGGCA ACCCCTTGGTGAGGGATTGGAAAGCTGGCGTGGATTTTACCAGAGCATTCGGCCTACTCA GATGGGCTTATCACTGAATATTGATATGTCAGCTACAGCTTTCATTGAGCCGTTACCTGT TATTGATTTTGTTGCACAACTATTGAATTCTGACATCCATTCAAGGCCGCTTTCTGATGC CGAACGTGTTAAGATCAAGAAAGCCTTGAGAGGAGTAAAGGTGGAAGTTACCCACCGTGG CAACATGAGGCGGAAGTACCGGATATCTGGTTTGACAATTCAGCCAACTCGTGAGCTAAC TTTTCCTGTTGATGAAGGAGGCACAGTGAAGTCAGTTGTACAGTACTTTCAAGAGACATA TGGCTTTGCCATCCAACACACCTACCTTCCATGCCTTACAGTTCAGCGATTAAATTACCT GCCTATGGAGGTCTGCAAAATAGTGGAAGGACAGAGATACTCCAAGAGATTAAATCAGAA TCAGATAAGAGCTCTTTTGGAGGAGACATGCCAACACCCACGTGATCGGGAGCGTGATAT TATTAAGATGGTTAAACATAACGCTTATCAGGATGATCCTTACGCAAAAGAGTTTGGCAT TAAGATAAGTGATCGTCTGGCATCAGTAGAGGCACGAATTTTACCGGCTCCACGGCTTAA GTACAATGAGACTGGTCGAGAGAAGGATTGCTTACCAAGAGTTGGTCAATGGAATATGAT GAACAAGAAAATGGTAAATGGTGGTAAAGTCAGAAGCTGGATGTGCGTCAATTTTGCCCG TAATGTGCAGGAAAGTGTTGTTCGTGGGTTCTGCCATGAACTTGCTCTGATGTGTCAAGC CTCAGGAATGGATTTCGCTCCAGAACCTATTCTTCCACCACTAAATGCACATCCAGATCA AGTGGAGCGTGCTCTAAAAGCTAGGTATCATGATGCAATGAACGTTCTTGGACCCCAGCG CAGGGAACTTGATTTGCTTATTGGGATACTACCTGATAACAATGGCTCGCTTTATGGTGA TTTGAAGCGCGTGTGTGAAATAGATCTTGGAATAGTTTCACAATGCTGTTGCACGAAGCA GGTGTTCAAAATGAACAAACAAATTCTTGCAAATCTTGCTCTGAAGATAAATGTCAAGGT TGGGGGCAGGAACACTGTGCTGGTGGATGCTGTGTCAAGGCGTATTCCTCTGGTAACCGA CAGACCTACAATTATATTTGGTGCTGATGTTACCCATCCTCATCCTGGAGAGGACAGCAG TCCCTCAATTGCTGCTGTTGTAGCCTCCCAAGATTGGCCTGAGGTGACAAAGTATGCTGG GTTGGTTTCTGCTCAAGCCCACCGACAAGAGCTGATAGAAGATCTATATAAAATCTGGCA GGATCCACAGAGAGGAACAGTTAGTGGTGGCATGATCCGTGAGCTGCTTATATCCTTCAA AAGATCAACTGGTGAGAAGCCCCAGCGAATAATATTTTACAGGGATGGCGTTAGTGAAGG CCAATTTTACCAAGTTCTACTTTATGAATTGAATGCAATCCGAAAAGCATGTGCCTCCCT GGAGACAAATTACCAACCAAAGGTGACTTTCATTGTGGTTCAGAAACGTCACCACACAAG ATTATTTGCACATAATCACAACGATCAGAACTCAGTTGACAGGAGCGGGAACATACTCCC TGGTACGGTTGTAGATTCAAAGATCTGTCATCCAACTGAGTTTGACTTCTACCTGTGTAG CCATGCTGGCATTAAGGGTACTAGTCGTCCAGCTCATTATCATGTCTTGTGGGATGAAAA CAACTTCACAGCTGATGCATTGCAGATTCTTACCAACAACCTTTGCTACACCTATGCAAG GTGCACTCGCTCTGTATCAATTGTTCCACCTGCTTATTATGCTCATCTGGCTGCCTTCCG TGCTCGTTTCTATATGGAACCAGATACATCTGACAGCAGCTCTGTCGTTAGTGGGCCTGG TGTACGTGGGCCACTTTCTGGCTCATCAACATCACGTACTCGGGCCCCTGGTGGTGCAGC TGTTAAGCCACTTCCTGCTCTGAAGGATAGTGTGAAGAGGGTCATGTTCTACTGCTGAAG CTAGGGCCTACATAGCTAAAGCTCTTCGTTTCTTGGCAACCTGCCTATGATGGTTGTAAT TATGTGTCAAAAAATCCCATAATAATCTGCCAGCTGCTATCTTCTCCATTGTACTATGCT GGTCATGTTTGCCAAAGTTACCCTATATGTATGTATATTATGCTATTGTTTTTTTTTTTT GCGGGGACTATTGTTATCATGTATTATGTTTTACTGTCATGTCTGTAGTTATGATTCGAG GAGTTTGCG