Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0831300-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:35747235:35751180:-1 gene:Os02g0831300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os02t0831300-01);Similar to beta-catenin-like protein 1. (Os02t0831300-02)
Sequence	GATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTG GACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAAG CGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCAC CCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGC CTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGCC TCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCC CTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCTCGCCGGCCTCCACTCCCTC GCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTTC TCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAAC CTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCGC TGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGAG ATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAGAAGCGCCTGGGCAACATCAAT GGAGTCGACGGCCTGCTGCAGGCCGTTGCCATGTACAAGTCCAGGGACCCAAAGACCTCT GATGAGGAGGAGATGCTCGAGAACCTCTTCGATTGCCTCTGCTGTGTGCTCATGCCCATG GAGAACAAGGAAAGATTTGTCAAGGCGGAGGGCGTCGAGCTCATGATCATCATCATGAAG CAGAAGAAGCTGGCATACAGCTCTGCCATCCGGACCCTCGATTTTGCCATGACTAGGTTC CCACCTGCTTGCGAGCGCTTTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTTC ATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGAA GAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGA ATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGAG TTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGAT TTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCTT TACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACAG ATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACTAAGGATGACGTTAAG GATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAA AGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGA

Peptide Sequence

PEP ID	Os02t0831300-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:35747235:35751180:-1 gene:Os02g0831300 transcript:Os02t0831300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os02t0831300-01);Similar to beta-catenin-like protein 1. (Os02t0831300-02)
Sequence	DAAHKRKRPDADDDGAAGAVDLSSLEGADDVEVLDLRAAKRLLLAFERRLRDNLEARMKH PDDPARFADSEIALHAETDRLRLLAGAPDLFPDLVPLGLASSLSSLLTHDNADLAAAAAS LLADLTDSDDPDDLAGLHSLADALVEANALDLLVHNLSRFSEADPDEAEAVHHTLSVVEN LLELRPQLADIVCDRTKLLRWLLARLKAREFDANKQYASEILAILLQDSPANQKRLGNIN GVDGLLQAVAMYKSRDPKTSDEEEMLENLFDCLCCVLMPMENKERFVKAEGVELMIIIMK QKKLAYSSAIRTLDFAMTRFPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKESYQEALE ERVISLIASLFGGITKGSRRIRLLGKFVENECEKIDRLMEFYTRYSERVKAETERLDSLD LDDLEMDEDERYNRKLEAGLYTLQLIALILGHIWHSGNSQMRTRIELLLRQNKLTKDDVK DILEEYHDNIGDLDGPEEKERAQGRTKEIIASLSL

Transcript Sequence

Transcript ID	Os02t0831300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35747235:35751180:-1 gene:Os02g0831300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os02t0831300-01);Similar to beta-catenin-like protein 1. (Os02t0831300-02)
Sequence	GGATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGT GGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAA GCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCA CCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCG CCTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGC CTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTC CCTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCTCGCCGGCCTCCACTCCCT CGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTT CTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAA CCTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCG CTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGA GATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAGAAGCGCCTGGGCAACATCAA TGGAGTCGACGGCCTGCTGCAGGCCGTTGCCATGTACAAGTCCAGGGACCCAAAGACCTC TGATGAGGAGGAGATGCTCGAGAACCTCTTCGATTGCCTCTGCTGTGTGCTCATGCCCAT GGAGAACAAGGAAAGATTTGTCAAGGCGGAGGGCGTCGAGCTCATGATCATCATCATGAA GCAGAAGAAGCTGGCATACAGCTCTGCCATCCGGACCCTCGATTTTGCCATGACTAGGTT CCCACCTGCTTGCGAGCGCTTTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTT CATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGA AGAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAG AATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGA GTTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGA TTTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCT TTACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACA GATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACTAAGGATGACGTTAA GGATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGA AAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTA TTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCT CATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGCGTTGGTTGCGTTGCAGG GTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGGCCCGCGCAATTGCGCGGCTA GCATTCATACATAATTATCGGTTTTTTTACATATAATATTACTTAAAATTTGCT