Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0829600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:35667571:35671732:-1 gene:Os02g0829600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0829600-01);Similar to Sperm protamine P1 (Po1) [Contains: Sperm protamine P2 (Po2) (Main protamine)]. (Os02t0829600-02)
Sequence	ATGCTCATGGCGGCCTCCTCCCCACCTCCCGCCGCCGCTAGCAGCAGCGGGCGACTCGCC AGGGTGCGCCTCCACGACCTGGCGCCCTACGATGGCGCCGCGACCCCCGCCTACGGCCGC GCCGTCCATGCCCTCTCCGCCTCCCTCACCCGCCACGGCGCCGCCCTCCTCGACCTCCCC GACGCCCACGCCGCCATCCTCCGCTGCGCCCTCCAATCCGCTCGCGCCTTCTTCCGCGCC AACGACCAACCCGCCTTCTACCTCTACCGCGCAGGGGGCAGCGCAAGTAGGACATCCGAT GACGGCGGCGGCGACCTGGTCCCTGCTTGCATGGACGACGCCTTCAGGTGTTTCGGTGAG GCTGCCCGCGCTGCTCTCTCTGCGATTGCTCGCCATCTCCGACTTCGTACCAATGTATTC GACCACTTGCTCGATGATACTCCATTGCCTGTTAATGAGGTCTCATCCTCGGAGTTGCTG GTGGCTTATTCCAACCAACACCTCCACACCGATCATGCTTCTTCTACTGCCTGTCTCGGC TCTTCAGTGCCTCAAGTTGACAGGGGCTTCCTTGTGCTCATTGCTTCTGATCATCCAGGA ATTGAGGTTTGTGACCCAAATGGCCAATGGTACCTAGCAGATGGCATTTCAGGGCCTGGT GACCTGTTGCTTCTGACTGGAAGGGCACTTAGCCATGTTACTGCTGGTTTGCGCCCAACT TCTCGCTACAGGATCACAAATGAGACTAGAGCATCACTCACCTTTAGGCTAATGCCACAT GCCAATGCTATACTGGATTGCTCTCCTATTGCAGCAGCTGGGCACTGCGTACCCCAGATG TACCAACCCATATCTGCAAGCCAATTTATGGATGACTTGTGTGCTGAAGAACGTGCTGTT TCGAATCATTCGGAAGCACCTTCTGAATCTCAGGGCAGCTTCATTAGTGAACCATCTCTC AGAAGTGTCCTATCAGATCCATTGTCTGGGGCTTTTCTTGAGGATGCTATGGTTCTGTTA TGTGGACACTCTTTCGGTGGCCTCATGCTGAAGAAAGTCATTGAAATGGCAAGATGCACC ATTTGCAATGGAGAAGTTGATCCGGCCACCCTGTTTCCTAATCTCGCTTTAAGAGCAGTA GCTACAGTGGTGAAGATGGAAGATGATAGGAGACTCTTTCATAATGCTGCTCTTCGCAAA CACAGGAAAGAGGTGACCGAACGTATGGATGTGCTGAAGAGCACTGGAGGTAGCAGAGGC AATGGTGAGCTGGTGTTGGATGCTGAAAACCCTACATCACCCAGGGGTGTGCAGTATCCA TTTGTAGTGGGCGAGAGGGTCCTGATCATGGGAAACAGAAGGACGCCTGATAAATTTGTT GGGAAGGAGGCAGTCATCACATCGCAGTGCTTGAATGGCTGGTATCTTGTGAAGGCGGTT GATAGCGGGGAAAGCATACGGCTGCAGTATCGGTCGCTGAAGAAAGTGTCGGAGCTGCAG CTTCAGTCAGAGATGAGGTTGCAGCCACTCACCTTCCTGCACAACAAATACCCCAGTAGT GGCAGCTGA

Peptide Sequence

PEP ID	Os02t0829600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:35667571:35671732:-1 gene:Os02g0829600 transcript:Os02t0829600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0829600-01);Similar to Sperm protamine P1 (Po1) [Contains: Sperm protamine P2 (Po2) (Main protamine)]. (Os02t0829600-02)
Sequence	MLMAASSPPPAAASSSGRLARVRLHDLAPYDGAATPAYGRAVHALSASLTRHGAALLDLP DAHAAILRCALQSARAFFRANDQPAFYLYRAGGSASRTSDDGGGDLVPACMDDAFRCFGE AARAALSAIARHLRLRTNVFDHLLDDTPLPVNEVSSSELLVAYSNQHLHTDHASSTACLG SSVPQVDRGFLVLIASDHPGIEVCDPNGQWYLADGISGPGDLLLLTGRALSHVTAGLRPT SRYRITNETRASLTFRLMPHANAILDCSPIAAAGHCVPQMYQPISASQFMDDLCAEERAV SNHSEAPSESQGSFISEPSLRSVLSDPLSGAFLEDAMVLLCGHSFGGLMLKKVIEMARCT ICNGEVDPATLFPNLALRAVATVVKMEDDRRLFHNAALRKHRKEVTERMDVLKSTGGSRG NGELVLDAENPTSPRGVQYPFVVGERVLIMGNRRTPDKFVGKEAVITSQCLNGWYLVKAV DSGESIRLQYRSLKKVSELQLQSEMRLQPLTFLHNKYPSSGS

Transcript Sequence

Transcript ID	Os02t0829600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35667571:35671732:-1 gene:Os02g0829600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0829600-01);Similar to Sperm protamine P1 (Po1) [Contains: Sperm protamine P2 (Po2) (Main protamine)]. (Os02t0829600-02)
Sequence	GGTCTTTTGCAGGCTTGCAGGTTGAGGAGCACTAGACGCTGTGGAGTGGAGGGAGGCGGA GATGGCGGAACAGTAGCCACCATGAGCTCCTCCCACTCCCATGCTCATGGCGGCCTCCTC CCCACCTCCCGCCGCCGCTAGCAGCAGCGGGCGACTCGCCAGGGTGCGCCTCCACGACCT GGCGCCCTACGATGGCGCCGCGACCCCCGCCTACGGCCGCGCCGTCCATGCCCTCTCCGC CTCCCTCACCCGCCACGGCGCCGCCCTCCTCGACCTCCCCGACGCCCACGCCGCCATCCT CCGCTGCGCCCTCCAATCCGCTCGCGCCTTCTTCCGCGCCAACGACCAACCCGCCTTCTA CCTCTACCGCGCAGGGGGCAGCGCAAGTAGGACATCCGATGACGGCGGCGGCGACCTGGT CCCTGCTTGCATGGACGACGCCTTCAGGTGTTTCGGTGAGGCTGCCCGCGCTGCTCTCTC TGCGATTGCTCGCCATCTCCGACTTCGTACCAATGTATTCGACCACTTGCTCGATGATAC TCCATTGCCTGTTAATGAGGTCTCATCCTCGGAGTTGCTGGTGGCTTATTCCAACCAACA CCTCCACACCGATCATGCTTCTTCTACTGCCTGTCTCGGCTCTTCAGTGCCTCAAGTTGA CAGGGGCTTCCTTGTGCTCATTGCTTCTGATCATCCAGGAATTGAGGTTTGTGACCCAAA TGGCCAATGGTACCTAGCAGATGGCATTTCAGGGCCTGGTGACCTGTTGCTTCTGACTGG AAGGGCACTTAGCCATGTTACTGCTGGTTTGCGCCCAACTTCTCGCTACAGGATCACAAA TGAGACTAGAGCATCACTCACCTTTAGGCTAATGCCACATGCCAATGCTATACTGGATTG CTCTCCTATTGCAGCAGCTGGGCACTGCGTACCCCAGATGTACCAACCCATATCTGCAAG CCAATTTATGGATGACTTGTGTGCTGAAGAACGTGCTGTTTCGAATCATTCGGAAGCACC TTCTGAATCTCAGGGCAGCTTCATTAGTGAACCATCTCTCAGAAGTGTCCTATCAGATCC ATTGTCTGGGGCTTTTCTTGAGGATGCTATGGTTCTGTTATGTGGACACTCTTTCGGTGG CCTCATGCTGAAGAAAGTCATTGAAATGGCAAGATGCACCATTTGCAATGGAGAAGTTGA TCCGGCCACCCTGTTTCCTAATCTCGCTTTAAGAGCAGTAGCTACAGTGGTGAAGATGGA AGATGATAGGAGACTCTTTCATAATGCTGCTCTTCGCAAACACAGGAAAGAGGTGACCGA ACGTATGGATGTGCTGAAGAGCACTGGAGGTAGCAGAGGCAATGGTGAGCTGGTGTTGGA TGCTGAAAACCCTACATCACCCAGGGGTGTGCAGTATCCATTTGTAGTGGGCGAGAGGGT CCTGATCATGGGAAACAGAAGGACGCCTGATAAATTTGTTGGGAAGGAGGCAGTCATCAC ATCGCAGTGCTTGAATGGCTGGTATCTTGTGAAGGCGGTTGATAGCGGGGAAAGCATACG GCTGCAGTATCGGTCGCTGAAGAAAGTGTCGGAGCTGCAGCTTCAGTCAGAGATGAGGTT GCAGCCACTCACCTTCCTGCACAACAAATACCCCAGTAGTGGCAGCTGAGTTGATTGACT ATCATCAGTCTTAAAACAAAAAAAAAAGAAAGGAGAAGCATATACTGTAGCAGAATAGTC ATGAGGCATGCATCGCCATCAAGCGTGTTTTGTTGTAGTAATACTAATAAAAAGGTCAGT TAGAAAAGTGTGGTGATAGTTAATCTGGTGATGATATGAAAAGGGTCTATCCTATTGGAA GGAGAAATGTCATGTGGGGGTTATTAAAAGGACATAAAGAGTTTGCTAGGAAGTTCCAAA TTCCTAGCGGTGGATGCAGCGGGTCAGCCAAGCCAAACCACAAACCAAACTGACTTTTCT ACTGCACTGCAACGCACCAGTAGATGCCAGTTGGTAATTCTTGATCCAAGCGTGAAAATG TGTAACTGGACCGGCTGGGCACTTGCAGAAAAAGTCGATAAATGTGTTGTGTTTGCTG