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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0829500-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:35660775:35663532:-1 gene:Os02g0829500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-lactamase-like domain containing protein. (Os02t0829500-01);Beta-lactamase-like domain containing protein. (Os02t0829500-02);Similar to Zn-dependent hydrolases, including glyoxylases. (Os02t0829500-03)
Sequence

ATGGCGTTGATGATGAGCCTTCGCTTCGCCCCCCCAGCGTCCGTCGCTGCTCCGCCGCCG
CGACGACCACGAGCTGTTGCCTCTTCGGCGTCCTCTCCGGCACTCCAACGCCGCCGCCCG
CAGAACGTCCCCGGCGACTTCTTCGTCGATCACCGATGCATCGATTGCCAGACCTGCCGC
TGGATGGCTTCGGAGGTGTTCAAGAGGGTGGACGGAAAAGCCGCCGTCGCCGCGCAGCCC
ATCTCCGACGAACACAGGACCAAGGCCCTGCAGGCTCTGCTCTCCTGTCCTACTTCCTCC
ATTCACACCGAGAAACCTGCAAAGGACATTCTTCAAGTGCAAAACATGTTCCCGCTCCCC
ATCGACAATCATCTTCTCCCTGGTGTTTACCTCTGTGGCTATCATTCTCAAGATTCATAT
GGAGCAACTTCTTATCTTTTAACCCATCCAGATGGAAACATACTAGTTGACAGCCCAAGG
TATACAACGAAACTGGCAGAGAACATCGAAAAACTTGGTGGAGCACGCTACATGTTTTTG
ACCCACATGGATGATGTCGCGGATCATAGGAAGTGGGCTGAGCGGCTAAAATGTGAGAGG
ATCATCCATTCGGGCGATGTAGAGGATGTTACTGCAGATGTTGAGTGGAAACTTACTGGA
AATGGCCCATGGGACATTGGAGCTGATTTCGAACTTATCCATACCCCAGGTCATACTGAA
GGTTCAGTCTGCTTATTCTACAAACCAGTAAAGGCGCTTTTCACTGGAGATCATGTTGCA
AAATCAGAAGAATCTGATGATTTAGATCTCTTTCTTATGTACAGCAAGCAATCAGTGGGC
TTGCAGCTGGACAGCATGAGAAAATTGTTGAAGTTAGACTTCGAGTGGTTTTTACCTGGT
CATGGCTATCGAATCCATTATAAAGACGTACGTGCTAAGGATTCAGCAATCGAGTCCCTC
ATAGCTAACTACACAAGCTAG

Peptide Sequence

PEP ID

Os02t0829500-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:35660775:35663532:-1 gene:Os02g0829500 transcript:Os02t0829500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-lactamase-like domain containing protein. (Os02t0829500-01);Beta-lactamase-like domain containing protein. (Os02t0829500-02);Similar to Zn-dependent hydrolases, including glyoxylases. (Os02t0829500-03)
Sequence

MALMMSLRFAPPASVAAPPPRRPRAVASSASSPALQRRRPQNVPGDFFVDHRCIDCQTCR
WMASEVFKRVDGKAAVAAQPISDEHRTKALQALLSCPTSSIHTEKPAKDILQVQNMFPLP
IDNHLLPGVYLCGYHSQDSYGATSYLLTHPDGNILVDSPRYTTKLAENIEKLGGARYMFL
THMDDVADHRKWAERLKCERIIHSGDVEDVTADVEWKLTGNGPWDIGADFELIHTPGHTE
GSVCLFYKPVKALFTGDHVAKSEESDDLDLFLMYSKQSVGLQLDSMRKLLKLDFEWFLPG
HGYRIHYKDVRAKDSAIESLIANYTS

Transcript Sequence

Transcript ID

Os02t0829500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35660775:35663532:-1 gene:Os02g0829500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-lactamase-like domain containing protein. (Os02t0829500-01);Beta-lactamase-like domain containing protein. (Os02t0829500-02);Similar to Zn-dependent hydrolases, including glyoxylases. (Os02t0829500-03)
Sequence

ACGCTGCTAGTTGTAGCACGCACGCTGTCGCTGACGCTGCTGTTCCGCCATGGCGTTGAT
GATGAGCCTTCGCTTCGCCCCCCCAGCGTCCGTCGCTGCTCCGCCGCCGCGACGACCACG
AGCTGTTGCCTCTTCGGCGTCCTCTCCGGCACTCCAACGCCGCCGCCCGCAGAACGTCCC
CGGCGACTTCTTCGTCGATCACCGATGCATCGATTGCCAGACCTGCCGCTGGATGGCTTC
GGAGGTGTTCAAGAGGGTGGACGGAAAAGCCGCCGTCGCCGCGCAGCCCATCTCCGACGA
ACACAGGACCAAGGCCCTGCAGGCTCTGCTCTCCTGTCCTACTTCCTCCATTCACACCGA
GAAACCTGCAAAGGACATTCTTCAAGTGCAAAACATGTTCCCGCTCCCCATCGACAATCA
TCTTCTCCCTGGTGTTTACCTCTGTGGCTATCATTCTCAAGATTCATATGGAGCAACTTC
TTATCTTTTAACCCATCCAGATGGAAACATACTAGTTGACAGCCCAAGGTATACAACGAA
ACTGGCAGAGAACATCGAAAAACTTGGTGGAGCACGCTACATGTTTTTGACCCACATGGA
TGATGTCGCGGATCATAGGAAGTGGGCTGAGCGGCTAAAATGTGAGAGGATCATCCATTC
GGGCGATGTAGAGGATGTTACTGCAGATGTTGAGTGGAAACTTACTGGAAATGGCCCATG
GGACATTGGAGCTGATTTCGAACTTATCCATACCCCAGGTCATACTGAAGGTTCAGTCTG
CTTATTCTACAAACCAGTAAAGGCGCTTTTCACTGGAGATCATGTTGCAAAATCAGAAGA
ATCTGATGATTTAGATCTCTTTCTTATGTACAGCAAGCAATCAGTGGGCTTGCAGCTGGA
CAGCATGAGAAAATTGTTGAAGTTAGACTTCGAGTGGTTTTTACCTGGTCATGGCTATCG
AATCCATTATAAAGACGTACGTGCTAAGGATTCAGCAATCGAGTCCCTCATAGCTAACTA
CACAAGCTAGGAGCGTATTATAATTCTCTCTACCTTCATTGTGTATAAATAACGACCGAT
TCTGGAATGAAGGGGCAAGAGAGAATGCACTTGCCATTTTGTCAGCGAGAGTGGCACTTC
ATATCCTTGGAAGATGATGGTACTGTTTTTGCTTCACGACATTTGCAATATATCAAGTCG
AAAATGTCATTGATGCAC