Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0827900-03
CDS Infomation

cds chromosome:IRGSP-1.0:2:35572396:35575862:-1 gene:Os02g0827900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 1, TYPE I SIGNAL PEPTIDASE 1 description:Similar to Microsomal signal peptidase 21 kDa subunit. (Os02t0827900-01);Hypothetical conserved gene. (Os02t0827900-02);Hypothetical conserved gene. (Os02t0827900-03);Non-protein coding transcript. (Os02t0827900-04)
Sequence

ATGGCGCCGCCTCCCGCCGGCGTGGAGGCCGTCTGCGCCGCCGTCATCAAATCCACGCTA
ACCCAACCCCACAACCACCACCACCTGCTCGCGGCCTCGCCCTCCCTCCTCGCCGCCGTC
CTCCACCGCCTCTCCCCGCTCCCCTCCACCGCGCTCGCCTTCTTCCGCTCCCTGCCTCCG
CCCCACCCGCTCGACGCCTCCCTCGCCCTCCTCCGCCTCCTCGCCCCCCACCCGCGCCAC
CACCCCACCGCCCGCTCCCTCCTCCGCGACCTCTCCCTCCGCCACCCGCTCTCCTCCCCG
CTCCTCCTCCCTTCCCTCCTCGCCGACCCCCACCTCCCCAGCTGGCTCCTCCTCCTCCTC
TCCCAGTCCGCCCGCCCGCACGACGCCCTCCGCGTCTTCGACCACATGCGCGCGCGCGAG
GTCGTCCCCGACGCGCATGCCTCCTCCGCGCTCCTCACCGCGCTCGCGAAGTCCCGGATG
ACGGCCACCGCGCGCAAGGTGTTCGACCAAATGACGCGGGCCGGGGTTGCCATGAACACC
CACGTGTACAACGCCATGCTGCACGTCTGCTTGAAGGCCGGGGACGCCGCGCTCGCTGAG
TCTCTGATGACGCGGATGGACGCCGCCGGTGTGCCGCTCGATAGGTTCTCCTTCAACACC
GTCATCGCGCTCTACTGCAGGAAGGGCATGCAGTACGAGGCCATGTGCGTACGGGAGCGG
ATGGAGAATCAGGGTGTCAAGGCTGACGTCGTCACATGGAACTCATTGATCCATGGCTTG
TGTAAGGAGCGCAGGGTGAAGGAGGCGAGTCAGCTGCTGAGAGAGATGGCGATGGCAGGG
GTGGCACCGGACCATGTCACATACACCACGCTTGTTGATGGGTACTGTCGAGCAGGCGAC
TTGGAGGAGGCGGTCAAGCTGCGAGGGGAGATGGAGGCAATGGGGATGCTACCAGGTGTC
GCGACATACAATGCGATTCTCAGGAAGCTCTGTGAAGATGGCAAGATGAAGGAGGTCAAT
GTGTTACTTAATGAGATGGATGAGAGGAAGGTGCAGGCTGATCATGTAACGTGCAACACG
CTGATCAACGCATACTGCAAGAGAGGGGACATGACCTCAGCGCTCAAGGTGAAAAGAAGG
ATGATGGAGTCAGGGCTACAGTTGGATCAGTTCACTTACAAGGCTCTCGTCCATGGTTTC
TGTAAGGCCAAGGAGCTGGATGAAGCCAAGGAAGCCTTGTTTGAGATGATGGGTGCAGGA
TTTTCACCCAATTATAGTGTGTTGTCATGGATTGTCGATGGTTTATGCAACAAGAATAAT
GCAGTTGCAGTTCTAGCCATTCCTGATGAACTTATGAAAAGAGGATTTCCACCAGATAAA
GCAGTATATAGGTCTCTGATCCGAAGGCTATGCAAGAAAGGGTTTATTGATCTTGCTGGG
AATGTGTTCAATGAAATGCAAGGCAAAGGTCTAGAAGCTGACTGTCTTGTGTATGCTACA
CTTGCGTGTGCATATCTGACTGCTGGGAAGCCAGTTGCTGCTTTGGATATCTTGAATGAG
ATGGCGAAGAAGCAGTTGTACATAACACCCCAGATTTACAACTGTATGTGTACCTCTTAT
GCTGATGAGAAGGGATCGCTTAATATGCTCTGGGTTCATGCCATTGAGAGAGGCCTAATC
ACAAAGAGCGTATACAAAGTGATGCACCAAGCAAGAATGAAATCTTCAAATCCTGCAGTC
TAG

Peptide Sequence

PEP ID

Os02t0827900-03
PEP Infomation

pep chromosome:IRGSP-1.0:2:35572396:35575862:-1 gene:Os02g0827900 transcript:Os02t0827900-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 1, TYPE I SIGNAL PEPTIDASE 1 description:Similar to Microsomal signal peptidase 21 kDa subunit. (Os02t0827900-01);Hypothetical conserved gene. (Os02t0827900-02);Hypothetical conserved gene. (Os02t0827900-03);Non-protein coding transcript. (Os02t0827900-04)
Sequence

MAPPPAGVEAVCAAVIKSTLTQPHNHHHLLAASPSLLAAVLHRLSPLPSTALAFFRSLPP
PHPLDASLALLRLLAPHPRHHPTARSLLRDLSLRHPLSSPLLLPSLLADPHLPSWLLLLL
SQSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNT
HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER
MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD
LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT
LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG
FSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAG
NVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIYNCMCTSY
ADEKGSLNMLWVHAIERGLITKSVYKVMHQARMKSSNPAV

Transcript Sequence

Transcript ID

Os02t0827900-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35572396:35575862:-1 gene:Os02g0827900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 1, TYPE I SIGNAL PEPTIDASE 1 description:Similar to Microsomal signal peptidase 21 kDa subunit. (Os02t0827900-01);Hypothetical conserved gene. (Os02t0827900-02);Hypothetical conserved gene. (Os02t0827900-03);Non-protein coding transcript. (Os02t0827900-04)
Sequence

GCTGATGGCGCCGCCTCCCGCCGGCGTGGAGGCCGTCTGCGCCGCCGTCATCAAATCCAC
GCTAACCCAACCCCACAACCACCACCACCTGCTCGCGGCCTCGCCCTCCCTCCTCGCCGC
CGTCCTCCACCGCCTCTCCCCGCTCCCCTCCACCGCGCTCGCCTTCTTCCGCTCCCTGCC
TCCGCCCCACCCGCTCGACGCCTCCCTCGCCCTCCTCCGCCTCCTCGCCCCCCACCCGCG
CCACCACCCCACCGCCCGCTCCCTCCTCCGCGACCTCTCCCTCCGCCACCCGCTCTCCTC
CCCGCTCCTCCTCCCTTCCCTCCTCGCCGACCCCCACCTCCCCAGCTGGCTCCTCCTCCT
CCTCTCCCAGTCCGCCCGCCCGCACGACGCCCTCCGCGTCTTCGACCACATGCGCGCGCG
CGAGGTCGTCCCCGACGCGCATGCCTCCTCCGCGCTCCTCACCGCGCTCGCGAAGTCCCG
GATGACGGCCACCGCGCGCAAGGTGTTCGACCAAATGACGCGGGCCGGGGTTGCCATGAA
CACCCACGTGTACAACGCCATGCTGCACGTCTGCTTGAAGGCCGGGGACGCCGCGCTCGC
TGAGTCTCTGATGACGCGGATGGACGCCGCCGGTGTGCCGCTCGATAGGTTCTCCTTCAA
CACCGTCATCGCGCTCTACTGCAGGAAGGGCATGCAGTACGAGGCCATGTGCGTACGGGA
GCGGATGGAGAATCAGGGTGTCAAGGCTGACGTCGTCACATGGAACTCATTGATCCATGG
CTTGTGTAAGGAGCGCAGGGTGAAGGAGGCGAGTCAGCTGCTGAGAGAGATGGCGATGGC
AGGGGTGGCACCGGACCATGTCACATACACCACGCTTGTTGATGGGTACTGTCGAGCAGG
CGACTTGGAGGAGGCGGTCAAGCTGCGAGGGGAGATGGAGGCAATGGGGATGCTACCAGG
TGTCGCGACATACAATGCGATTCTCAGGAAGCTCTGTGAAGATGGCAAGATGAAGGAGGT
CAATGTGTTACTTAATGAGATGGATGAGAGGAAGGTGCAGGCTGATCATGTAACGTGCAA
CACGCTGATCAACGCATACTGCAAGAGAGGGGACATGACCTCAGCGCTCAAGGTGAAAAG
AAGGATGATGGAGTCAGGGCTACAGTTGGATCAGTTCACTTACAAGGCTCTCGTCCATGG
TTTCTGTAAGGCCAAGGAGCTGGATGAAGCCAAGGAAGCCTTGTTTGAGATGATGGGTGC
AGGATTTTCACCCAATTATAGTGTGTTGTCATGGATTGTCGATGGTTTATGCAACAAGAA
TAATGCAGTTGCAGTTCTAGCCATTCCTGATGAACTTATGAAAAGAGGATTTCCACCAGA
TAAAGCAGTATATAGGTCTCTGATCCGAAGGCTATGCAAGAAAGGGTTTATTGATCTTGC
TGGGAATGTGTTCAATGAAATGCAAGGCAAAGGTCTAGAAGCTGACTGTCTTGTGTATGC
TACACTTGCGTGTGCATATCTGACTGCTGGGAAGCCAGTTGCTGCTTTGGATATCTTGAA
TGAGATGGCGAAGAAGCAGTTGTACATAACACCCCAGATTTACAACTGTATGTGTACCTC
TTATGCTGATGAGAAGGGATCGCTTAATATGCTCTGGGTTCATGCCATTGAGAGAGGCCT
AATCACAAAGAGCGTATACAAAGTGATGCACCAAGCAAGAATGAAATCTTCAAATCCTGC
AGTCTAGAATGCGAGGAGGGGAATGCTCATATTTCAGGGATGAACTTTTCAGAGACTGTG
AATTGAGAGTGGGCTATAGAAATAGTCTTGCACTTTGGTCTTTTGATGTCGATGATGCTC
ACAAATCAAGCTGCAAATTTGCAGGTGATGGGGTGCTTCAATTCCAAACCAAACAATGCC
GGTGCGATCAGAAGAAGACATGGGAGGGTAGAAGTGGATGTTTGCGCCTGGATTATGAGT
TCCTGAGGCTCAGAGGAGCTGCGTCGAGGACTTGGATAATTTTCATGGCTACTCGCTACT
CATGAGCACTACTCCTGACTAGGCCCAGGAGGCGCACGATCACTCTTCATGGTTCATTCA
TGGCACATCTGCTAAATTGATTATCAAGAAGAATAATGGCAGAGGTGATGAACTAACTGT
CTGAATTCAGTGTTTTTTTTTTCGCCGGGAAGGCTGAAGGAGACCATCCGAGTATATTAA
GAAGGAGTAAAAGTTACAAGAAAAACACCACAACTGAATTCAGTGCTTGCTGGACTGCTG
ATCTTCTGCAGGCTTTGGAGGATTATTTGCCTCTGCTCTTCTCAGCCTAGTCAAAGATGA
TAACCTGATTTCCCCTTCTTTTTAATTGGTCTGAATGAAATCCAGGAGATTTGTGTCAGT
CGAGGTTGAATTCTTTTACAGGGAGCGAGTTGGAAGATAGTACAATTTTGCATTTATGAA
CGAAGAGGATGATGCAGAGGTCCGCGTGCACCTATATTGTTGCATGTGGTGTAGGACAAT
AGGAGTGATACTGTACTGTGTTTGATCATCTATTTGTCTTGTGTACCGTCAATGCCCAGT
GCTTAGAATGAGATGCTACCTGTTGTCTTGGACACGTGACGGCTATGCTGCATTCGTCCG
AAGCAATTTTTGTGCGTCTTCCTAAGACATGTATTGAGGGATACCATGCTAATATAAGGT
ATCTGAGGGTCTGGAGCAATATGTAAGCATATGAGATACAGATAATTAGACTCTGAAACT
TTGTGTTTGTATTCCATGATAAGTTTGCTGCTG