Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0827600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35567756:35570398:-1 gene:Os02g0827600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3531 domain containing protein. (Os02t0827600-01)
Sequence

ATGATGCCACCACCAGTTCAAACCCTACGCCTCCTCCTCCTCACCCCTTTCCCGCCACCT
CCTCGCCTCCGCTTCCACCGCCTTACGGCCACAGGGAGGTCCGACAATGCCGCCGCGGCG
TCCGGCACCACGGCGAGGGAGCGCCGCCTCGCCAAGGTGCGGGAGGAGCGCCGCCGCCGT
CAGCACGAGCTCGACAACACCTATCCCGGCTGGGCAAGGGTTCTGGAGAATGCCTGCAGG
GACGACGACGAACTCCGCGCCATTCTCGGTGATAGCATCGGGAACCCAGAGCTCATGAAG
CAAAGGATCCAAGAAAGGGTACGCAAGAAAGGCAGGGCACAATTCAACAAATCCAAGACA
GGGTCTATTGTTGCATTCAAAGTCAGCTTTCGAGACTTCAACCCACTAAATTCATTCATT
TGGTTTGAACTCTTTGGAGAACCAACGGATCGAGATGTTGATCTGCTTGGCGGTGTGATT
CAGGCTTGGTATGTCATGGGGAGATTAGGAGCTTACAACTCTTCAAATTTGCAGCTGGCC
AATTCAATGCTGGACTATGACCCTTCATATGATTCTGATCAAGCTTCTGGTGTGATGCCT
TCATCTTTCCATGATATCAGTGATGTCGAATTCCAAGACAATTGGGGCAGAGTTTGGGTG
GATCTTGGAACATCGGATTATCTTGGATTGGATGTATTACTCAACTGTCTTACACAATTA
AGCTCAGAGCACTTGGGCATCAAACAAGTGGTATTTGGTGGCAAAAAAATGGGCGACTGG
GAAGAGGGGATGAAGAACTCTGATTACGGATACAGGCATTTCAAGATATAG

Peptide Sequence

PEP ID

Os02t0827600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35567756:35570398:-1 gene:Os02g0827600 transcript:Os02t0827600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3531 domain containing protein. (Os02t0827600-01)
Sequence

MMPPPVQTLRLLLLTPFPPPPRLRFHRLTATGRSDNAAAASGTTARERRLAKVREERRRR
QHELDNTYPGWARVLENACRDDDELRAILGDSIGNPELMKQRIQERVRKKGRAQFNKSKT
GSIVAFKVSFRDFNPLNSFIWFELFGEPTDRDVDLLGGVIQAWYVMGRLGAYNSSNLQLA
NSMLDYDPSYDSDQASGVMPSSFHDISDVEFQDNWGRVWVDLGTSDYLGLDVLLNCLTQL
SSEHLGIKQVVFGGKKMGDWEEGMKNSDYGYRHFKI

Transcript Sequence

Transcript ID

Os02t0827600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35567756:35570398:-1 gene:Os02g0827600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3531 domain containing protein. (Os02t0827600-01)
Sequence

GCTCAGCTCGGCGATGAGATGATGCCACCACCAGTTCAAACCCTACGCCTCCTCCTCCTC
ACCCCTTTCCCGCCACCTCCTCGCCTCCGCTTCCACCGCCTTACGGCCACAGGGAGGTCC
GACAATGCCGCCGCGGCGTCCGGCACCACGGCGAGGGAGCGCCGCCTCGCCAAGGTGCGG
GAGGAGCGCCGCCGCCGTCAGCACGAGCTCGACAACACCTATCCCGGCTGGGCAAGGGTT
CTGGAGAATGCCTGCAGGGACGACGACGAACTCCGCGCCATTCTCGGTGATAGCATCGGG
AACCCAGAGCTCATGAAGCAAAGGATCCAAGAAAGGGTACGCAAGAAAGGCAGGGCACAA
TTCAACAAATCCAAGACAGGGTCTATTGTTGCATTCAAAGTCAGCTTTCGAGACTTCAAC
CCACTAAATTCATTCATTTGGTTTGAACTCTTTGGAGAACCAACGGATCGAGATGTTGAT
CTGCTTGGCGGTGTGATTCAGGCTTGGTATGTCATGGGGAGATTAGGAGCTTACAACTCT
TCAAATTTGCAGCTGGCCAATTCAATGCTGGACTATGACCCTTCATATGATTCTGATCAA
GCTTCTGGTGTGATGCCTTCATCTTTCCATGATATCAGTGATGTCGAATTCCAAGACAAT
TGGGGCAGAGTTTGGGTGGATCTTGGAACATCGGATTATCTTGGATTGGATGTATTACTC
AACTGTCTTACACAATTAAGCTCAGAGCACTTGGGCATCAAACAAGTGGTATTTGGTGGC
AAAAAAATGGGCGACTGGGAAGAGGGGATGAAGAACTCTGATTACGGATACAGGCATTTC
AAGATATAGCTGTACCGAGGAGTGATATGCAATGGTCATGTGAGGGAGGCCTTCATATGT
ACTCCAGGCCTCTGGGGATTCTCCGGCCTATAGTGGCAAGACTTTTCACTTGAAGCAGAG
AAATTTTTTGGACGACTGACCAAGATTAGTGTGCCTAGATTGATCTTGTGCTCGTGTGTG
TAAATAATTTTAATTTTCCTCTAGGTTGTATTAGAACTGAATCCAACAATCCAGTAAAAT
GTATTGTAGCAATTATATC