Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0827500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35564830:35567513:1 gene:Os02g0827500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0827500-01)
Sequence

GAGTTCAATAATTACATATCATCATTAAATTCTGAATACCCAGGTTTCCTAAAGCCTACA
GTATTTTCTAGTGAGGACCATGAGGTTATGGACAGGGCAATAAAGACTGATGGGTCTTCC
AAGGTCCGTCTCTTTCTCAAAAAGCTGGCAAAGAAGGCATCTACAAAGGTTCCGTTAGAG
GGTAAGACAAGTTCCGGATCATCTACACAAGGAGAAAGAAAGATATTGGATAAATTACGC
AGCTATCAGGGCACACCGTTTATTGAAGGATTAATGGGTTCACAAGATGACAAGTCCAAT
AGCAGTTCATCACAAGATACAGTGAAACCCAGTCCAACGTCTCCTGCTCTGGGTCAAATT
GGACAACCTTCAGCTTTCCCTGATGTAAATGCCGATGATAGAATAGCAGATGAAGGTACA
CTTTGTTGGAACCTTTTATCTTCACGGTTGTTTTTTGATGCTAAAATGAGCGATGAGATA
CACAAGGCCATCAAAGCACGCATTCAGCGAACGTTATCAAGCATGAGGACCCCACCTTAT
GTTGGTGACATCACACTTGCTGACTTCAGCCTTGGAAAGCTTCCACCTTATGTACACGCG
ATGAGAGTCCTTCCACTGGATTTGAATGAGTTATGGGCTTTTGAAGTTGATTTTGAATAT
TCTAGTGGAATACTACTGCACATTGAAACAAGACTCGAGGTTCAGGAACCAGAGTTACAG
AAGGACATAATGAAAAGTAACTTTGGTACAGACTCAAATGGAGAGGTTGAATCAGATCTT
CTTGAGAGTATTGAACAATACGGTAACCAATTTCGAGATTCCCAAAATTCAGTTTCCTCA
GTTGAAGAAAAAGGTGAACCAGATGGTAGTCAGCCCAAGAGCACTGGATGGACATCGGCC
TATATATCAGGGTGGAAAAATATCATGCATTCCATAGCAGATCATGTCTCACAGGTGCCG
CTCTCTCTGGCGATAAAAATTTCATCTGTTCGAGGTGTCCTGCGTGTGCATGTGAAACCT
CCTCCTTCTGATCAACTCTGGTACGGATTTACATCAATGCCTGATTTAGAGTGGGACATC
GAATCTTCTATTGGTGATAGGAAAATTACCAACAGTCACATTGGCTCGCTTATCGGTAAC
AGATTCAAGGCTTCACTCCGTGACAGTTTGGTGCTCCCAAACTGTGAAAGTATTTCCATA
CCATTTATGTTGGCAGAAAAGGATGACTGGGTACCTCTCAAGGATGCACCTTTTATTTGG
CTCAATCGTGAGCCCACTGAGACCAGAAGCCACGCTGCAGCCGTTACGCCAACCCGGCCT
GACGAAGTTATTCTGAAGGATGATGCTAGTAACAAAACTGTGGCGCCAAGTTTGCCCAAT
TCGTCAGCAAGAAGTGAGGAAACACTTAAAACAGCAGCATCCATTGATGAGCCAACCCAA
GTGCCTGTGGCGGCAGCGGATGCATCGCATGAGCCGAGGAAGACTCCCTTGGCTCCAGCT
GGTGAAGCATCGTCTCCTTCCAGTCCTGACACAATCGACGAGCTGAGGAAGCCATTGCTG
ATCACAGAAAAGATTCAGGAAGAGGATTCTGAAAGCAAAGTGGAGTCTCCCTCGCCCCTG
TACACATCTCTGAGGGGGATAGTGCCTGCAGGGGAGCAATCTGGAGACGAGTCGAAGCGA
AAAGGCGGCAGGCGAGCTCGGATGATGGACTTCGGGAAGAAGATGGGAGACAAGCTGGAG
GAGAAGAGGCGGCACATCGAAGAGAAGGGGCGGAATATCGTAGAGAAGATGCGCGAGAAT
GCCAGGACCAACAGCTTCGATAGGTCAATGACTAGCAGCAGCCATAGCAATAGCCAAAGC
CAATAG

Peptide Sequence

PEP ID

Os02t0827500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35564830:35567513:1 gene:Os02g0827500 transcript:Os02t0827500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0827500-01)
Sequence

EFNNYISSLNSEYPGFLKPTVFSSEDHEVMDRAIKTDGSSKVRLFLKKLAKKASTKVPLE
GKTSSGSSTQGERKILDKLRSYQGTPFIEGLMGSQDDKSNSSSSQDTVKPSPTSPALGQI
GQPSAFPDVNADDRIADEGTLCWNLLSSRLFFDAKMSDEIHKAIKARIQRTLSSMRTPPY
VGDITLADFSLGKLPPYVHAMRVLPLDLNELWAFEVDFEYSSGILLHIETRLEVQEPELQ
KDIMKSNFGTDSNGEVESDLLESIEQYGNQFRDSQNSVSSVEEKGEPDGSQPKSTGWTSA
YISGWKNIMHSIADHVSQVPLSLAIKISSVRGVLRVHVKPPPSDQLWYGFTSMPDLEWDI
ESSIGDRKITNSHIGSLIGNRFKASLRDSLVLPNCESISIPFMLAEKDDWVPLKDAPFIW
LNREPTETRSHAAAVTPTRPDEVILKDDASNKTVAPSLPNSSARSEETLKTAASIDEPTQ
VPVAAADASHEPRKTPLAPAGEASSPSSPDTIDELRKPLLITEKIQEEDSESKVESPSPL
YTSLRGIVPAGEQSGDESKRKGGRRARMMDFGKKMGDKLEEKRRHIEEKGRNIVEKMREN
ARTNSFDRSMTSSSHSNSQSQ

Transcript Sequence

Transcript ID

Os02t0827500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35564830:35567513:1 gene:Os02g0827500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0827500-01)
Sequence

GAGTTCAATAATTACATATCATCATTAAATTCTGAATACCCAGGTTTCCTAAAGCCTACA
GTATTTTCTAGTGAGGACCATGAGGTTATGGACAGGGCAATAAAGACTGATGGGTCTTCC
AAGGTCCGTCTCTTTCTCAAAAAGCTGGCAAAGAAGGCATCTACAAAGGTTCCGTTAGAG
GGTAAGACAAGTTCCGGATCATCTACACAAGGAGAAAGAAAGATATTGGATAAATTACGC
AGCTATCAGGGCACACCGTTTATTGAAGGATTAATGGGTTCACAAGATGACAAGTCCAAT
AGCAGTTCATCACAAGATACAGTGAAACCCAGTCCAACGTCTCCTGCTCTGGGTCAAATT
GGACAACCTTCAGCTTTCCCTGATGTAAATGCCGATGATAGAATAGCAGATGAAGGTACA
CTTTGTTGGAACCTTTTATCTTCACGGTTGTTTTTTGATGCTAAAATGAGCGATGAGATA
CACAAGGCCATCAAAGCACGCATTCAGCGAACGTTATCAAGCATGAGGACCCCACCTTAT
GTTGGTGACATCACACTTGCTGACTTCAGCCTTGGAAAGCTTCCACCTTATGTACACGCG
ATGAGAGTCCTTCCACTGGATTTGAATGAGTTATGGGCTTTTGAAGTTGATTTTGAATAT
TCTAGTGGAATACTACTGCACATTGAAACAAGACTCGAGGTTCAGGAACCAGAGTTACAG
AAGGACATAATGAAAAGTAACTTTGGTACAGACTCAAATGGAGAGGTTGAATCAGATCTT
CTTGAGAGTATTGAACAATACGGTAACCAATTTCGAGATTCCCAAAATTCAGTTTCCTCA
GTTGAAGAAAAAGGTGAACCAGATGGTAGTCAGCCCAAGAGCACTGGATGGACATCGGCC
TATATATCAGGGTGGAAAAATATCATGCATTCCATAGCAGATCATGTCTCACAGGTGCCG
CTCTCTCTGGCGATAAAAATTTCATCTGTTCGAGGTGTCCTGCGTGTGCATGTGAAACCT
CCTCCTTCTGATCAACTCTGGTACGGATTTACATCAATGCCTGATTTAGAGTGGGACATC
GAATCTTCTATTGGTGATAGGAAAATTACCAACAGTCACATTGGCTCGCTTATCGGTAAC
AGATTCAAGGCTTCACTCCGTGACAGTTTGGTGCTCCCAAACTGTGAAAGTATTTCCATA
CCATTTATGTTGGCAGAAAAGGATGACTGGGTACCTCTCAAGGATGCACCTTTTATTTGG
CTCAATCGTGAGCCCACTGAGACCAGAAGCCACGCTGCAGCCGTTACGCCAACCCGGCCT
GACGAAGTTATTCTGAAGGATGATGCTAGTAACAAAACTGTGGCGCCAAGTTTGCCCAAT
TCGTCAGCAAGAAGTGAGGAAACACTTAAAACAGCAGCATCCATTGATGAGCCAACCCAA
GTGCCTGTGGCGGCAGCGGATGCATCGCATGAGCCGAGGAAGACTCCCTTGGCTCCAGCT
GGTGAAGCATCGTCTCCTTCCAGTCCTGACACAATCGACGAGCTGAGGAAGCCATTGCTG
ATCACAGAAAAGATTCAGGAAGAGGATTCTGAAAGCAAAGTGGAGTCTCCCTCGCCCCTG
TACACATCTCTGAGGGGGATAGTGCCTGCAGGGGAGCAATCTGGAGACGAGTCGAAGCGA
AAAGGCGGCAGGCGAGCTCGGATGATGGACTTCGGGAAGAAGATGGGAGACAAGCTGGAG
GAGAAGAGGCGGCACATCGAAGAGAAGGGGCGGAATATCGTAGAGAAGATGCGCGAGAAT
GCCAGGACCAACAGCTTCGATAGGTCAATGACTAGCAGCAGCCATAGCAATAGCCAAAGC
CAATAGCTAGCTAGCTCGTTTGTAAAACTTTGGAGATCGTTTGGTGCCAGTCTTTATTCC
TGGTTCAGATGTATAGCTAACTTTCCTGGACGGTATGCATGCATGATTTAATTTTTGATG
TGGAATTCC