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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0827400-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:35560478:35561544:1 gene:Os02g0827400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0827400-00)
Sequence

AGCTCTGAATCGGTTTCTGCAAAGCAAGGTGCCGGCTGCCTGAATTTTCAGTACAACGAG
TGGAGCTCGCCCTACGAGAGAGTCCCGCTAGCAGATAAGGTGGCAGAGCTGGCTCAGCAT
TATCCATGCTTGACATCTCTCAGCAGTGCACAACTTTCACCTTCGAGCTGGATGTCTGTA
GCATGGTACCCGATTTATCATATCCCAGCTCGTGGAAACCTCAAGGGGTTATCTACGTGT
TTCCTAACCTATCATTCCCTCTCCTCAGTTTTCCAAGATAATGTTGAGGAGGGGAGGAGC
GTTGTTGGTGTTTCGCCGTTTGGGCTGGCGACGTACAGAGCGGAAGGGAAGCTGTGGACA
TCGTCGAGGAGCTCTGATCTCTTCTGGGCAGCGTCTTCTTGGCTCAAGCAGCTGCGAGCT
TACCATCCTGACTTCATCTTCTTCACGTCTCACTGCCGGCAATCTGCATTCTGA

Peptide Sequence

PEP ID

Os02t0827400-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:35560478:35561544:1 gene:Os02g0827400 transcript:Os02t0827400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0827400-00)
Sequence

SSESVSAKQGAGCLNFQYNEWSSPYERVPLADKVAELAQHYPCLTSLSSAQLSPSSWMSV
AWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQDNVEEGRSVVGVSPFGLATYRAEGKLWT
SSRSSDLFWAASSWLKQLRAYHPDFIFFTSHCRQSAF

Transcript Sequence

Transcript ID

Os02t0827400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35560478:35561544:1 gene:Os02g0827400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0827400-00)
Sequence

TAGCTCTGAATCGGTTTCTGCAAAGCAAGGTGCCGGCTGCCTGAATTTTCAGTACAACGA
GTGGAGCTCGCCCTACGAGAGAGTCCCGCTAGCAGATAAGGTGGCAGAGCTGGCTCAGCA
TTATCCATGCTTGACATCTCTCAGCAGTGCACAACTTTCACCTTCGAGCTGGATGTCTGT
AGCATGGTACCCGATTTATCATATCCCAGCTCGTGGAAACCTCAAGGGGTTATCTACGTG
TTTCCTAACCTATCATTCCCTCTCCTCAGTTTTCCAAGATAATGTTGAGGAGGGGAGGAG
CGTTGTTGGTGTTTCGCCGTTTGGGCTGGCGACGTACAGAGCGGAAGGGAAGCTGTGGAC
ATCGTCGAGGAGCTCTGATCTCTTCTGGGCAGCGTCTTCTTGGCTCAAGCAGCTGCGAGC
TTACCATCCTGACTTCATCTTCTTCACGTCTCACTGCCGGCAATCTGCATTCTGAACCTG
ACGCTTGTTGCTTAAGCTTAATTATACTCGATACTCAGCCTCCGGTGGTGCTAGAAGAAG
GCCAAACTAGGATGGAGGAAATTGTTTTGTCAGTCACCTTGCGAGCTATACTGAATTTAA
AGGACTTTTTTTTTTTCATCAACAGCAAGTATGTTGTACTCC