Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0827300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35553869:35558878:1 gene:Os02g0827300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF382 domain containing protein. (Os02t0827300-01)
Sequence

ATGGCCGCCGCCGCCGAGGTCGACGCGGCCCCCGACCTCCCCAACGGATCCTCCGCCACC
GCCACAACCGACAAGAAGAAGTCGCGGGAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAG
AAGAAGAACAAGGCCGCGTCCAACGCCGCAGATGCGGATGCGGCCGGGGACGCCGGGGCC
GACGACGACGCCGCCGAGGAGAAGCCTGATGTCAAACCCCAGGTGGAGGTGGAGGTGGAG
TACGTCCCGGAGCAGGCGGACCTGGACGACGGCCTCCTCGCCGACTTCAAGAGCATCTTC
GACAAGTTCACCTTCAAGGATTCCTCTGCCGACGCCGAGGATGACGAGAAGAAAGATGAG
GCTGGCACTGATGCCGCAAAGAAGGCTGCAGGGTCTGATTCGGACGACGACGAGCAGGGG
ACACAGCAAAAGAAGGAAGGGGGCTTGTCCAACAAGCAAAAGAAACTACAACGAAGGATG
AAGATTGCAGAACTGAAACAGATATGCAATAGACCTGATGTTGTGGAGGTCTGGGATGCA
ACGGCATCGGATCCATCATTACTTGTCTATCTGAAGTCCTACAGGAACACTGTACCTGTC
CCAAGGCATTGGTGTCAAAAGCGCAAATTCTTGCAGGGTAAGCGAGGTATCGAGAAACAA
CCTTTTCAACTCCCTGACTTCATCGCTGCAACTGGAATAGAAAAAATAAGACAGGCATAT
ATTGAGAAGGAGGATAGTAAAAAGTTGAAACAAAAGCAGCGGGAGCGTATGCAACCAAAA
ATGGGCAAGATGGATATAGATTATCAGGTCTTGCATGACGCCTTCTTCAAATACCAAACA
AAGCCAAAATTGACTAGTCATGGTGACCTGTATTATGAAGGGAAAGAGTTTGAGGTCAAG
CTTAGGGAAATGAAGCCAGGCATGCTGTCGCGAGAACTTAAAGAGGCTCTTGGTATGCCT
GATGGTGCGCCACCTCCATGGCTTATAAACATGCAGAGATATGGTCCTCCGCCCTCTTAT
CCTCAGCTGAAGATTCCTGGGCTAAATGCTCCGATTCCTCCTGGTGCTAGCTTCGGATAC
CGACCTGGGGAATGGGGAAAACCTCCTGTTGATGAGCATGGGCGCCCCTTATATGGAGAT
GTTTTTGGAGTCCTACAGCAGGATGAACCTAATTATGATGAAGAACCTGTTGATCGCAGC
AAGCACTGGGGAGACTTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAG
GAAGAAGAGCCAATGGAAGATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATC
TCAAGCACTCCAACTGGTGTGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGG
AAAGAGCCTGAAAAGCAGACCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAA
AGAATTGCTCCTGGGGCTATCTATGGATCAAGCCATACGTATGCGATTGGTGCACAGGAT
AAGGCTGGTCCTAAAAGGGTGGATCTTCTCAAGAATCAGAAGTCTGATAAGGTGGATGTC
ACCATACAACCTGAGGAGCTTGAAGTTATGGATGATGTTTTGGCTGCCAAGTACGAGGAA
GCCCGGGAGGAGGAGAAGCTACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAG
AACGCAAGCAAGAGGAAGAGGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTC
AAGTTCTAG

Peptide Sequence

PEP ID

Os02t0827300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35553869:35558878:1 gene:Os02g0827300 transcript:Os02t0827300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF382 domain containing protein. (Os02t0827300-01)
Sequence

MAAAAEVDAAPDLPNGSSATATTDKKKSRESERRRRRRKQKKNKAASNAADADAAGDAGA
DDDAAEEKPDVKPQVEVEVEYVPEQADLDDGLLADFKSIFDKFTFKDSSADAEDDEKKDE
AGTDAAKKAAGSDSDDDEQGTQQKKEGGLSNKQKKLQRRMKIAELKQICNRPDVVEVWDA
TASDPSLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAY
IEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYYEGKEFEVK
LREMKPGMLSRELKEALGMPDGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGY
RPGEWGKPPVDEHGRPLYGDVFGVLQQDEPNYDEEPVDRSKHWGDLEEEEEEEEEEEEEE
EEEPMEDEDMEDGMQSVDTISSTPTGVETPDVIDLRKLQRKEPEKQTEKQLYQILEQKEE
RIAPGAIYGSSHTYAIGAQDKAGPKRVDLLKNQKSDKVDVTIQPEELEVMDDVLAAKYEE
AREEEKLRNQKEDFSDMVAENASKRKRKQEKDGKSKKKDFKF

Transcript Sequence

Transcript ID

Os02t0827300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35553869:35558878:1 gene:Os02g0827300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF382 domain containing protein. (Os02t0827300-01)
Sequence

TCCCTCTCGACTCTGGACCTCTCCTCTCCACGCCGACCGCCATGGCCGCCGCCGCCGAGG
TCGACGCGGCCCCCGACCTCCCCAACGGATCCTCCGCCACCGCCACAACCGACAAGAAGA
AGTCGCGGGAGAGCGAGCGCCGCCGCCGCCGCCGCAAGCAGAAGAAGAACAAGGCCGCGT
CCAACGCCGCAGATGCGGATGCGGCCGGGGACGCCGGGGCCGACGACGACGCCGCCGAGG
AGAAGCCTGATGTCAAACCCCAGGTGGAGGTGGAGGTGGAGTACGTCCCGGAGCAGGCGG
ACCTGGACGACGGCCTCCTCGCCGACTTCAAGAGCATCTTCGACAAGTTCACCTTCAAGG
ATTCCTCTGCCGACGCCGAGGATGACGAGAAGAAAGATGAGGCTGGCACTGATGCCGCAA
AGAAGGCTGCAGGGTCTGATTCGGACGACGACGAGCAGGGGACACAGCAAAAGAAGGAAG
GGGGCTTGTCCAACAAGCAAAAGAAACTACAACGAAGGATGAAGATTGCAGAACTGAAAC
AGATATGCAATAGACCTGATGTTGTGGAGGTCTGGGATGCAACGGCATCGGATCCATCAT
TACTTGTCTATCTGAAGTCCTACAGGAACACTGTACCTGTCCCAAGGCATTGGTGTCAAA
AGCGCAAATTCTTGCAGGGTAAGCGAGGTATCGAGAAACAACCTTTTCAACTCCCTGACT
TCATCGCTGCAACTGGAATAGAAAAAATAAGACAGGCATATATTGAGAAGGAGGATAGTA
AAAAGTTGAAACAAAAGCAGCGGGAGCGTATGCAACCAAAAATGGGCAAGATGGATATAG
ATTATCAGGTCTTGCATGACGCCTTCTTCAAATACCAAACAAAGCCAAAATTGACTAGTC
ATGGTGACCTGTATTATGAAGGGAAAGAGTTTGAGGTCAAGCTTAGGGAAATGAAGCCAG
GCATGCTGTCGCGAGAACTTAAAGAGGCTCTTGGTATGCCTGATGGTGCGCCACCTCCAT
GGCTTATAAACATGCAGAGATATGGTCCTCCGCCCTCTTATCCTCAGCTGAAGATTCCTG
GGCTAAATGCTCCGATTCCTCCTGGTGCTAGCTTCGGATACCGACCTGGGGAATGGGGAA
AACCTCCTGTTGATGAGCATGGGCGCCCCTTATATGGAGATGTTTTTGGAGTCCTACAGC
AGGATGAACCTAATTATGATGAAGAACCTGTTGATCGCAGCAAGCACTGGGGAGACTTGG
AGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGAAGAAGAGCCAATGGAAG
ATGAAGACATGGAAGACGGCATGCAATCTGTTGACACCATCTCAAGCACTCCAACTGGTG
TGGAAACACCTGATGTGATTGATCTTCGGAAGCTGCAGCGGAAAGAGCCTGAAAAGCAGA
CCGAGAAGCAACTATACCAGATTCTTGAGCAAAAAGAAGAAAGAATTGCTCCTGGGGCTA
TCTATGGATCAAGCCATACGTATGCGATTGGTGCACAGGATAAGGCTGGTCCTAAAAGGG
TGGATCTTCTCAAGAATCAGAAGTCTGATAAGGTGGATGTCACCATACAACCTGAGGAGC
TTGAAGTTATGGATGATGTTTTGGCTGCCAAGTACGAGGAAGCCCGGGAGGAGGAGAAGC
TACGGAACCAGAAGGAAGATTTCAGCGACATGGTGGCGGAGAACGCAAGCAAGAGGAAGA
GGAAGCAGGAGAAGGACGGGAAGTCGAAGAAGAAAGACTTCAAGTTCTAGATGTTGCCCT
TTGCGAGTTAGCCAGATCCAAGGAAGAGGAGGCGGCACGGCATCCATCTGTTTTTTTAGA
TTGCCCTTGTCTGAGAATAGATGAATGCGTAGGCACGAGTGTAGCAGCAGCACAGCCCTT
TTTTATGTGTGTGTGTATTGTATGACTGATGGCCTTCACCTTGATATGATGATGATGTTT
ACTTTACTGGACAATTATCGTGTAGTAGAGGACAGAGAGCGTTACGTTCTCTTTTC