Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0824300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35415323:35419464:-1 gene:Os02g0824300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os02t0824300-01)
Sequence

ATGGATGGGAGGGAGTCCACAGTGGCGTCAGGCTCCAACTTCTCCTCCTTCTATGTGCAG
CACCGGGGCATTGGCGTGCCGGGAGGCTCCGGGCACCCGGCCGGGCTCCACGGCCCGCCG
CCCGGTGGATATCGGCAGCATCTTGATGCAGTCTCTGCGGGGTACCCTTTCCAGCCCCCT
CACATTGGGGGTTCCCACATTGGGCAGGGTTACCACCATGTTGATGCCTCAGCCCCTGTC
GCGCAGCACGGCAGTGGTGGCGGTGGTGGTGGTATGGACATTGGCATGGGTGTCGAAATG
AGCGCGGATGCTAAAGGGGATCAGGGGAGTGGTGCTGGCCAGGATGAGCCGGTGAAGAAG
AAGCGGGGGAGGCCGAGGAAGTATAAGCCTGATGGGGCGGTCACGCTGGGGCTCTCGCCG
TCTTCGTCGACGCCTCACTCGTCGACCTCGGCGATGGGTACAATGGTGACCACACCAGGC
TCAGGGTTTGGGTCGGGGGCAGGATCGGGGGGTTCGGGGTCTGGTGCCCTTACAGAGAAG
CGTGGCCGAGGGCGGCCACCTGGGTCTGGAAAGATGCAGCAGTTGGCTTCTCTTGGAAAA
TGGTTTCTTGGTTCTGTTGGAACAGGTTTTACTCCTCATGTGATTATTATTTCACCAGGA
GAGGATGTTGCTGCCAGGATAATGTCCTTCTCACAACAGGGCCCAAGGGCAGTGTGCATC
ATCTCAGCGACAGGAGCTGTATCCACAGCAACCCTTCATCAGGATTCAAACTCTGGTGGT
GTGGTTACATATGAGGGTCGATTTGAAATCCTGTGCCTGTCTGGATCATATTTGGTGATA
GAGGAAGGTGGTTCGCGAACCCGGAGTGGAGGCCTCTGCATAGCTCTGTGTGGCCCTGAC
CACAGGGTTATTGGTGGGAGTGTAGGTGGAGTCCTGACAGCAGCTGGAACTGTTCAGGTG
ATAGTGGGGAGCTTCATGTATGGTGGGACAAAGAAAAATAAAGCGAAAGCTGAGCAAGAG
ACGGAGAATAACGAAGAGCCAATTGGCGGTGAGGAGGAGACCCCCACAATGGCACTGCCA
GATCACAACATGCCGCATCATACGATGGGTGGATGGTCGGCTGGGTTGATGAGGCAGATG
GACTCAAGAACTCCAAACATCGACATCAACTCTATTCGCGAGTAA

Peptide Sequence

PEP ID

Os02t0824300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35415323:35419464:-1 gene:Os02g0824300 transcript:Os02t0824300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os02t0824300-01)
Sequence

MDGRESTVASGSNFSSFYVQHRGIGVPGGSGHPAGLHGPPPGGYRQHLDAVSAGYPFQPP
HIGGSHIGQGYHHVDASAPVAQHGSGGGGGGMDIGMGVEMSADAKGDQGSGAGQDEPVKK
KRGRPRKYKPDGAVTLGLSPSSSTPHSSTSAMGTMVTTPGSGFGSGAGSGGSGSGALTEK
RGRGRPPGSGKMQQLASLGKWFLGSVGTGFTPHVIIISPGEDVAARIMSFSQQGPRAVCI
ISATGAVSTATLHQDSNSGGVVTYEGRFEILCLSGSYLVIEEGGSRTRSGGLCIALCGPD
HRVIGGSVGGVLTAAGTVQVIVGSFMYGGTKKNKAKAEQETENNEEPIGGEEETPTMALP
DHNMPHHTMGGWSAGLMRQMDSRTPNIDINSIRE

Transcript Sequence

Transcript ID

Os02t0824300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35415323:35419464:-1 gene:Os02g0824300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os02t0824300-01)
Sequence

CTCTCTCTCTCTCCCTCCTCTCCTCTCTTCTCTTCTCTTCTCTTGGGCTCCTCTCTCCTG
TGATCCCCCTCCGCTAGGGTTTTAGCTATCTCCCATTTCCCCCATCCATCGCCATTTCGA
TTGGATCACTCCTCTCCCCCCTCCACCGCCTCTCGGATCCCGCCGCCGCCCGCCGTCGCC
GCCTCCGCCGCCGCAGACTCTATCTCTCTGTGTATCCATCCCTTCTCGACCTCGCGCAAA
TCCCATCCTTTTCGCCCCTTCTTTCCCTGCGAAAGATCGGGTTTTTTTTTCTGCCCGTCT
CTTTCTCGCGTTTGGTTCCAATCTTTTGCTGCCTGGAGATTTCACCGCCTTGTTCAGAGT
CGAGATCTCCCGTCGCTGCTCGATCTGATCTCGCCTCGTTTCTCGAGGAGAGAAAAAAAA
CAAAACAAACAAACTGCGGTTTTTGTGTTCGGGAGTCGGTGGAGAAGAGATCTCTCTCCG
AGATTGATATTCTTGCGTCCATTTGCTTCGCCTCCGATAGCTTTCGGAGGAATCTAATCT
CGAATAGTGAAGGAAAGTTGCCACCTTGGTTGTGCTTGTGGTTGTGGGTGGCCGCGTGAG
TTCCTCCTCCTTCCTCCTCTGTGGCGCAGCTTCCCATTCCATGAATGGATGGGAGGGAGT
CCACAGTGGCGTCAGGCTCCAACTTCTCCTCCTTCTATGTGCAGCACCGGGGCATTGGCG
TGCCGGGAGGCTCCGGGCACCCGGCCGGGCTCCACGGCCCGCCGCCCGGTGGATATCGGC
AGCATCTTGATGCAGTCTCTGCGGGGTACCCTTTCCAGCCCCCTCACATTGGGGGTTCCC
ACATTGGGCAGGGTTACCACCATGTTGATGCCTCAGCCCCTGTCGCGCAGCACGGCAGTG
GTGGCGGTGGTGGTGGTATGGACATTGGCATGGGTGTCGAAATGAGCGCGGATGCTAAAG
GGGATCAGGGGAGTGGTGCTGGCCAGGATGAGCCGGTGAAGAAGAAGCGGGGGAGGCCGA
GGAAGTATAAGCCTGATGGGGCGGTCACGCTGGGGCTCTCGCCGTCTTCGTCGACGCCTC
ACTCGTCGACCTCGGCGATGGGTACAATGGTGACCACACCAGGCTCAGGGTTTGGGTCGG
GGGCAGGATCGGGGGGTTCGGGGTCTGGTGCCCTTACAGAGAAGCGTGGCCGAGGGCGGC
CACCTGGGTCTGGAAAGATGCAGCAGTTGGCTTCTCTTGGAAAATGGTTTCTTGGTTCTG
TTGGAACAGGTTTTACTCCTCATGTGATTATTATTTCACCAGGAGAGGATGTTGCTGCCA
GGATAATGTCCTTCTCACAACAGGGCCCAAGGGCAGTGTGCATCATCTCAGCGACAGGAG
CTGTATCCACAGCAACCCTTCATCAGGATTCAAACTCTGGTGGTGTGGTTACATATGAGG
GTCGATTTGAAATCCTGTGCCTGTCTGGATCATATTTGGTGATAGAGGAAGGTGGTTCGC
GAACCCGGAGTGGAGGCCTCTGCATAGCTCTGTGTGGCCCTGACCACAGGGTTATTGGTG
GGAGTGTAGGTGGAGTCCTGACAGCAGCTGGAACTGTTCAGGTGATAGTGGGGAGCTTCA
TGTATGGTGGGACAAAGAAAAATAAAGCGAAAGCTGAGCAAGAGACGGAGAATAACGAAG
AGCCAATTGGCGGTGAGGAGGAGACCCCCACAATGGCACTGCCAGATCACAACATGCCGC
ATCATACGATGGGTGGATGGTCGGCTGGGTTGATGAGGCAGATGGACTCAAGAACTCCAA
ACATCGACATCAACTCTATTCGCGAGTAATGTGTATTATTGCTGGAAGGAAGGAGCACCA
CCTATATATCTATCTCTGACTGACGGAATTCCCCGAATCCCCGTGAGTGCGCTTGGTAGC
ATGCAATGCAACGCGATGCGCTAACTTGCTGTAGGTGTAAGAGGAAGAGAGTTGTTTGAG
AAATGATGTTGCTGGATGCTGAGGTATATGTCAGTGCTATGTTAGGAACTCCTCTACATA
CTAAGTATTAGAATATGAATGTTATGGTGGTGTACTGTGAATCTGCTGCATCTGCATCTG
CGGTGTTGTATGAGAATGAAGGATCCGGATCGTACCCTATTATATTATATAGAGGAAGAA
AAAAGAACCTGGGGATTT