Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0823800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:35379378:35384497:1 gene:Os02g0823800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Smg8/Smg9 domain containing protein. (Os02t0823800-01);Hypothetical conserved gene. (Os02t0823800-02)
Sequence	ATGGAGCCGCCGCCTCAGGCGGGCCCCTCCCCGGCCGTCCGCGTCCTCTCCCGCACGCCC CCGCCACCCGCCTCCTCCTCCCCCTCCCCGCCGCCCCCCGCCGCCACCCCGCCCTCCCAC GACGGCGTCGTCGCCGTCGGCTTCGTCGGCGGCGGGGGCACTGCCCGCCTCGCCGACCGG ATCCTGGACGCCCATGTGTTCTCCCCTGGTGGCTCCGCCAGGACCCTCGCGGGCGGAGTC AGGTACCACCGCGACGGGGAGAAGAGGGTGGTGTTCCTGCACCTCGCTCCGTCGCCGCCG ACACCTCTGGAGGGGGCGGGCGATCTACGGGAGCTGCTCTTCATGTTCTCCGTTTGCCAT GTAATAATATTTCTCCAAGAAGGCTTCCGGTTCGACACACAGATTTTGAAGAAATTCCGT CTGTTGCAATCCTCAAAGCATGCTATTGCACCGTTTGTGAAGTCACTAGTAGCTCCTGCA GTGCCATCAAAAGTTGCTCGCTCTAATACTCCAACAAAGCCTACTCACAGGGCCTCATCC ATCTCTCCTCCTGCACGCCGTGGAGGTCGTCATCCCTCAGCAATCTCGTTGATGTCAGGA ACTGGCTCACATCCTTGTATGCTGCCAGGGCTATGCATCCCTGTTGTTCTGTTTGTCTTT GAGGATGATATCACTGATGCTCCAGGTGCTCCGACAAGTCCGGATGATACGAACGACACA TCATCAAATCAAGCTTCTAACACTGATGGCTTGCCAAAACCTAACATGACTTCAAAAGGT TCTAGTTCAGTGGTTATGCTTGCTAGGCCAGCAATCAGATCTGATGGTACTTTCAGCAAG AAGCTGCATTCCTCTGTAGAAGGTCAGATACGTTTCTTGCTAAAGAAGTGTCGGACACTT GTGGGTCTAGAGCCAGGGCATATTGTTTCGAGGGGTGTCAGTAATGTGAGCCACCTACCT CTGTTCTCACTTGATACATCAAGGGTCGTTGCACTGTTGGATCGGTCAATTAGTAAGAAA CGTGAGCCATTGGATATCATTGCAGGACTGTTTGAAGACTCTTTGACATCCAAATCATCA TTGGATGTTTCTTCGCTGGAGAACAATTGCCATCCAGCAACCCATGAAGATGTTCAGTTC ATCAAGGATTTTATATTTCGACAATCAGATGGGCTGAGAGGAAGAGGGGGACACTCAAGC AATACAACTGCTGGTCCTGTTTCTGGTGTTGGAATGGTGGCAGCAGCAGCAGCTGCTGCT GCAGCATCAGCAGCATCCGGGAAGCAAATGAGTGCTCCTGATCTCCCTACTTTCGATACA TGGTTGTCTATAAGTTCATCTATTTTGTCTGCACTGTTTAGTGGGGAAGATGGGTTAAGT AGTTCCCAAAACATGAAGGCATCACCTACTCATACAAGTTCATTTCCAAAGAACGATCAA CTTCCTTCAGCAGGATCCAACGCAATTCAAACTGCTTTATCTTGCTTGGAAGGCAATAAG GGGCTTAATGTGAAATTTTCTTCATCATGGTGCCAAAGGATACTTCCAGCTGCTAAGGAG GTGTATTTGAAAGATTTGCCTGCCTTTTACCCAACCAGCATGCATGAAGTACAGCTACAG AAAGCTTTACGATCCTTCCACTCAATGGTTAAAGGACCGGCTGTCCAAGTATTCTCCAAG AAGCTAAAAGATGAATGCCAAGCAATATGGGAATCTGGAAGGCAGCAATGCGATGCTGTC AGTCTTACTGGCAGACCATGTAAGCACCAGAGACACGGTAAATCCTCTCCATCAGATGCA GCGTTACAGCATTCTAGTGGATATGTTTTCCTCCATGCATGTGCCTGTGGCCGGTCACGC CGTCTTAGGGATGACCCTTTTGATTTTGAGGCAGCGAACATGACCTTTAACTGCTTCTCT AATTGTGAAGATCTGTTACCTACTCTTGTGCTTCCAAGAGAGACCAATGCTGGTGCATTT CCAGTATCCTCTTGGCGTTTGGTGCGGCTTGGAGGAGCAAGATATTACAAACCAACAAAA GGATTGCTCCAAGCAGGTTTTTGCTCCAAGGAAAAATATCTTTTAAGGTGGACGATTTCT CTTGGGAAAGGACAAGGGAAACATGGCACTCATGCTACCAATAAACCTTTCTCCACGGCA TCTAATGCAGATCCTCAGGCTCCCCCTATTGTTGCTGGAGAAGTAAAATCGGCCGTGACC CAAGTCACAGCAGAAATTAAATCTATGAAACTTGAAAATTCTAGAAAACAACCTGAAGTC GAGTCAATGAACAATTCAAGTATTAATTTTGGTAAAGGTCTTCCAAACTTTACTATGAAG AAGCCTTTTGCTGAAGTTGTTGCTGGCCACACAGCAAGGGATTCTGAGTTTCCTGCTCTC CAACAGAAGAGGCCATTAAAACCTGGCAACTGGAAAGATGAGCGGCAAGTGAGTGGAGCA GACCAAACTAATGGCCGTGGTCATCCAGCTCTTAGTCAAGGACCTATAGCTGACAATGAA TCTGAGAAAGTGAGCAGAGATAAGAGTAATGGAAGTGCTGGCGGAAAGCCATTTCTACAG ATAGGGAGCAATATAGTGCCAATGGTTGTCGGAAAAGAGACTAAAGAAGTTAATCAATCT ATACAGCAGTTCATGGTATATGTCGGATTTGAGCACGAGTGTTCCTATGGTCATCGTTTC TTACTGTCAGAGAAACATCTCAAGGAGATTGATTCGTCTTATTTGCAGTTTGAAAGATCT AATCTAAATAATGAAGCAGAAAGCAAACATGGTTCACAAAAGTTGCCCCAAAATGCATCT AGATTAGCAGCAACAATGGATGTGACCAGCGGAGGGAAGCTCAATAGGCCAATGGATTCA TCAGGGAGAAACAGCCAGCAGCAATTGCTTAAGCCCAGGGTTGACGCTGAGACCTTGCAG CCTTCTCACTGGCTTTCAGATCCACAGAATGAAAGAAAGGGAGAGCTTTCTCTTCATTAT GTTACACTTGATGATGGTGGAGAAGCATTTTCACTTCTAAACAGAAATCTGCCCATATAT ATGCACTGCCCACATTGCAAGAGCTCAGATAGGAAGGGAAATCAAGATGCAAAGGTTGCT GCTGCTGTGTCACAACTTCAACGGATTTTTATTGTCACACCTGATTTCCCTGTTCTGCTG GCAAGCTGCCCAGTTGTACAGTTTGAGGCCTCATGTTTGCCTTCAAATGCTTCTGACCAT GATCAACAAGGATCGTTCAGTCTTGGTTGTCGAGTTGTCCTTCCACCTGAGAGCTTTCTT ACCATGAGACTTCCATTTGTCTATGGTGTTGAGACAAGAGATGGAAATACAGCTCCCCTG AAATACCTTGAGGAACAACCAGAACTCACAGCTTGGCTTGTTGGAGGCACAGCTTTGCAG ATTGTATCAGTAGGGCATACTAATGAGAAAGAAGCACCACTGTGA

Peptide Sequence

PEP ID	Os02t0823800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:35379378:35384497:1 gene:Os02g0823800 transcript:Os02t0823800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Smg8/Smg9 domain containing protein. (Os02t0823800-01);Hypothetical conserved gene. (Os02t0823800-02)
Sequence	MEPPPQAGPSPAVRVLSRTPPPPASSSPSPPPPAATPPSHDGVVAVGFVGGGGTARLADR ILDAHVFSPGGSARTLAGGVRYHRDGEKRVVFLHLAPSPPTPLEGAGDLRELLFMFSVCH VIIFLQEGFRFDTQILKKFRLLQSSKHAIAPFVKSLVAPAVPSKVARSNTPTKPTHRASS ISPPARRGGRHPSAISLMSGTGSHPCMLPGLCIPVVLFVFEDDITDAPGAPTSPDDTNDT SSNQASNTDGLPKPNMTSKGSSSVVMLARPAIRSDGTFSKKLHSSVEGQIRFLLKKCRTL VGLEPGHIVSRGVSNVSHLPLFSLDTSRVVALLDRSISKKREPLDIIAGLFEDSLTSKSS LDVSSLENNCHPATHEDVQFIKDFIFRQSDGLRGRGGHSSNTTAGPVSGVGMVAAAAAAA AASAASGKQMSAPDLPTFDTWLSISSSILSALFSGEDGLSSSQNMKASPTHTSSFPKNDQ LPSAGSNAIQTALSCLEGNKGLNVKFSSSWCQRILPAAKEVYLKDLPAFYPTSMHEVQLQ KALRSFHSMVKGPAVQVFSKKLKDECQAIWESGRQQCDAVSLTGRPCKHQRHGKSSPSDA ALQHSSGYVFLHACACGRSRRLRDDPFDFEAANMTFNCFSNCEDLLPTLVLPRETNAGAF PVSSWRLVRLGGARYYKPTKGLLQAGFCSKEKYLLRWTISLGKGQGKHGTHATNKPFSTA SNADPQAPPIVAGEVKSAVTQVTAEIKSMKLENSRKQPEVESMNNSSINFGKGLPNFTMK KPFAEVVAGHTARDSEFPALQQKRPLKPGNWKDERQVSGADQTNGRGHPALSQGPIADNE SEKVSRDKSNGSAGGKPFLQIGSNIVPMVVGKETKEVNQSIQQFMVYVGFEHECSYGHRF LLSEKHLKEIDSSYLQFERSNLNNEAESKHGSQKLPQNASRLAATMDVTSGGKLNRPMDS SGRNSQQQLLKPRVDAETLQPSHWLSDPQNERKGELSLHYVTLDDGGEAFSLLNRNLPIY MHCPHCKSSDRKGNQDAKVAAAVSQLQRIFIVTPDFPVLLASCPVVQFEASCLPSNASDH DQQGSFSLGCRVVLPPESFLTMRLPFVYGVETRDGNTAPLKYLEEQPELTAWLVGGTALQ IVSVGHTNEKEAPL

Transcript Sequence

Transcript ID	Os02t0823800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35379378:35384497:1 gene:Os02g0823800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Smg8/Smg9 domain containing protein. (Os02t0823800-01);Hypothetical conserved gene. (Os02t0823800-02)
Sequence	AGTTGGCGTCTCGCAATACACAGACAGAGGTTGCTGCTACTGCGGCGGCGCCACCCACCC CCACCTCGCCGCCGGCGATGGAGCCGCCGCCTCAGGCGGGCCCCTCCCCGGCCGTCCGCG TCCTCTCCCGCACGCCCCCGCCACCCGCCTCCTCCTCCCCCTCCCCGCCGCCCCCCGCCG CCACCCCGCCCTCCCACGACGGCGTCGTCGCCGTCGGCTTCGTCGGCGGCGGGGGCACTG CCCGCCTCGCCGACCGGATCCTGGACGCCCATGTGTTCTCCCCTGGTGGCTCCGCCAGGA CCCTCGCGGGCGGAGTCAGGTACCACCGCGACGGGGAGAAGAGGGTGGTGTTCCTGCACC TCGCTCCGTCGCCGCCGACACCTCTGGAGGGGGCGGGCGATCTACGGGAGCTGCTCTTCA TGTTCTCCGTTTGCCATGTAATAATATTTCTCCAAGAAGGCTTCCGGTTCGACACACAGA TTTTGAAGAAATTCCGTCTGTTGCAATCCTCAAAGCATGCTATTGCACCGTTTGTGAAGT CACTAGTAGCTCCTGCAGTGCCATCAAAAGTTGCTCGCTCTAATACTCCAACAAAGCCTA CTCACAGGGCCTCATCCATCTCTCCTCCTGCACGCCGTGGAGGTCGTCATCCCTCAGCAA TCTCGTTGATGTCAGGAACTGGCTCACATCCTTGTATGCTGCCAGGGCTATGCATCCCTG TTGTTCTGTTTGTCTTTGAGGATGATATCACTGATGCTCCAGGTGCTCCGACAAGTCCGG ATGATACGAACGACACATCATCAAATCAAGCTTCTAACACTGATGGCTTGCCAAAACCTA ACATGACTTCAAAAGGTTCTAGTTCAGTGGTTATGCTTGCTAGGCCAGCAATCAGATCTG ATGGTACTTTCAGCAAGAAGCTGCATTCCTCTGTAGAAGGTCAGATACGTTTCTTGCTAA AGAAGTGTCGGACACTTGTGGGTCTAGAGCCAGGGCATATTGTTTCGAGGGGTGTCAGTA ATGTGAGCCACCTACCTCTGTTCTCACTTGATACATCAAGGGTCGTTGCACTGTTGGATC GGTCAATTAGTAAGAAACGTGAGCCATTGGATATCATTGCAGGACTGTTTGAAGACTCTT TGACATCCAAATCATCATTGGATGTTTCTTCGCTGGAGAACAATTGCCATCCAGCAACCC ATGAAGATGTTCAGTTCATCAAGGATTTTATATTTCGACAATCAGATGGGCTGAGAGGAA GAGGGGGACACTCAAGCAATACAACTGCTGGTCCTGTTTCTGGTGTTGGAATGGTGGCAG CAGCAGCAGCTGCTGCTGCAGCATCAGCAGCATCCGGGAAGCAAATGAGTGCTCCTGATC TCCCTACTTTCGATACATGGTTGTCTATAAGTTCATCTATTTTGTCTGCACTGTTTAGTG GGGAAGATGGGTTAAGTAGTTCCCAAAACATGAAGGCATCACCTACTCATACAAGTTCAT TTCCAAAGAACGATCAACTTCCTTCAGCAGGATCCAACGCAATTCAAACTGCTTTATCTT GCTTGGAAGGCAATAAGGGGCTTAATGTGAAATTTTCTTCATCATGGTGCCAAAGGATAC TTCCAGCTGCTAAGGAGGTGTATTTGAAAGATTTGCCTGCCTTTTACCCAACCAGCATGC ATGAAGTACAGCTACAGAAAGCTTTACGATCCTTCCACTCAATGGTTAAAGGACCGGCTG TCCAAGTATTCTCCAAGAAGCTAAAAGATGAATGCCAAGCAATATGGGAATCTGGAAGGC AGCAATGCGATGCTGTCAGTCTTACTGGCAGACCATGTAAGCACCAGAGACACGGTAAAT CCTCTCCATCAGATGCAGCGTTACAGCATTCTAGTGGATATGTTTTCCTCCATGCATGTG CCTGTGGCCGGTCACGCCGTCTTAGGGATGACCCTTTTGATTTTGAGGCAGCGAACATGA CCTTTAACTGCTTCTCTAATTGTGAAGATCTGTTACCTACTCTTGTGCTTCCAAGAGAGA CCAATGCTGGTGCATTTCCAGTATCCTCTTGGCGTTTGGTGCGGCTTGGAGGAGCAAGAT ATTACAAACCAACAAAAGGATTGCTCCAAGCAGGTTTTTGCTCCAAGGAAAAATATCTTT TAAGGTGGACGATTTCTCTTGGGAAAGGACAAGGGAAACATGGCACTCATGCTACCAATA AACCTTTCTCCACGGCATCTAATGCAGATCCTCAGGCTCCCCCTATTGTTGCTGGAGAAG TAAAATCGGCCGTGACCCAAGTCACAGCAGAAATTAAATCTATGAAACTTGAAAATTCTA GAAAACAACCTGAAGTCGAGTCAATGAACAATTCAAGTATTAATTTTGGTAAAGGTCTTC CAAACTTTACTATGAAGAAGCCTTTTGCTGAAGTTGTTGCTGGCCACACAGCAAGGGATT CTGAGTTTCCTGCTCTCCAACAGAAGAGGCCATTAAAACCTGGCAACTGGAAAGATGAGC GGCAAGTGAGTGGAGCAGACCAAACTAATGGCCGTGGTCATCCAGCTCTTAGTCAAGGAC CTATAGCTGACAATGAATCTGAGAAAGTGAGCAGAGATAAGAGTAATGGAAGTGCTGGCG GAAAGCCATTTCTACAGATAGGGAGCAATATAGTGCCAATGGTTGTCGGAAAAGAGACTA AAGAAGTTAATCAATCTATACAGCAGTTCATGGTATATGTCGGATTTGAGCACGAGTGTT CCTATGGTCATCGTTTCTTACTGTCAGAGAAACATCTCAAGGAGATTGATTCGTCTTATT TGCAGTTTGAAAGATCTAATCTAAATAATGAAGCAGAAAGCAAACATGGTTCACAAAAGT TGCCCCAAAATGCATCTAGATTAGCAGCAACAATGGATGTGACCAGCGGAGGGAAGCTCA ATAGGCCAATGGATTCATCAGGGAGAAACAGCCAGCAGCAATTGCTTAAGCCCAGGGTTG ACGCTGAGACCTTGCAGCCTTCTCACTGGCTTTCAGATCCACAGAATGAAAGAAAGGGAG AGCTTTCTCTTCATTATGTTACACTTGATGATGGTGGAGAAGCATTTTCACTTCTAAACA GAAATCTGCCCATATATATGCACTGCCCACATTGCAAGAGCTCAGATAGGAAGGGAAATC AAGATGCAAAGGTTGCTGCTGCTGTGTCACAACTTCAACGGATTTTTATTGTCACACCTG ATTTCCCTGTTCTGCTGGCAAGCTGCCCAGTTGTACAGTTTGAGGCCTCATGTTTGCCTT CAAATGCTTCTGACCATGATCAACAAGGATCGTTCAGTCTTGGTTGTCGAGTTGTCCTTC CACCTGAGAGCTTTCTTACCATGAGACTTCCATTTGTCTATGGTGTTGAGACAAGAGATG GAAATACAGCTCCCCTGAAATACCTTGAGGAACAACCAGAACTCACAGCTTGGCTTGTTG GAGGCACAGCTTTGCAGATTGTATCAGTAGGGCATACTAATGAGAAAGAAGCACCACTGT GAAGTGCGAAACGTGGGCTCTTAAGATTTATTCGTTTTGGTGTATCCTATTTTTGCATTC AGTGATGGGCAATTGGTTCCAGCATTGAATTTCAGGATTCCGGCAAGTGTAATGGCTCAT GATGTTTACATGGAGGTCTCGCCTCTCCTGCTGGATTTACGATGCTATGCTATTGATACA ACTCTAGCTTCCTTTTGCATTGAGAAACAGGAGCTCTCTTGACAAGATGAATGATGCACA ATGGATGCATTGGAGTGAGCTGGTGATGCAGGGAACTGGACATGTACATTAATAGGTGTC AGGTAAAATTTCACTGTTGTATATTAATAGATGTTCCACGACAATTCGCCTTTGTCTCAG AATTTTAGTCCCATGAGTTAGTCCGTTTTAGCATGTAATGGTTTAGGCTTTTAGTCAGTC TAAATGCTGCTGTACTGTTGGGCATAATAATAAATTTTACACTGTCTTTGTAAAGC