Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0823700-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:35376562:35378825:-1 gene:Os02g0823700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 22 description:Similar to Xyloglucan endotransglucosylase/hydrolase 9. (Os02t0823700-00)
Sequence

ATGGCTATCATTGGTCGGAGGCAGCAGCAGGGTGTCGCGGCGGCGGCGGCGACGTTGGTG
GCGTTGATGGCGGTGGTGGTGGCGGCGGCGGCGGAAGCGCAGCCGTCGCCGGGGGTGTAC
CCGAGCAGGATGTTCCGAGCGCGGGAGTTCGGGCGCGACTTCCGGAGCCTGTGGGGGGCG
GAGCACCAGCAGCAGGAGGCGGCGGCGCCGGAGACGGGGGTGACGGTGTGGCTGGACCGG
CGGTCGGGGAGCGGGTTCAAGTCGCGGCGGGCTTACCGGAGCGGGTACTTCGGGGCGTGG
GTGCGGCTGCAGCGCGGGTACACGGCGGGGGTGATCACCGCCTTCTACCTGTCCAACGGC
GAGGCGCACCCGGGGTGGCACGACGAGGTGGACATGGAGTTCCTCGGCACCACCCCCGGG
AAGCCCTACACGCTGCAGACCAACGTCTTCTCCCTCGGCTCCGGCGACCCGCCCCGGTCC
CTCGGCCGCGAGATCAAGTTCCACCTCTGGTTCGACCCCACCGCCGACTTCCACCACTAC
GCCATCCTCTGGACATCCGACCACATCATCTTCTTGGTGGACGACGTGCCGATCCGGCGG
TACGGGCGGCGGAGCGCGGGGGGCGCGGCGGGGTTCCCGGCGAGGCCGATGTGGGTATAC
GGCTCCATCTGGGACGCGTCGTCGTGGGCGACGGAGGACGGCAGGTACAGGGCGGACTAC
AGTTACCAGCCGTTCGTCGCGCGCTTCTCGGCCTTCCTCCTCCGGGGATGCTCGCCGCAC
GCGCCCCGCACCTGCGCCGCCCCCGTCGCCGGCGACCTCACCGCCGCCCAGCTCGCCGCC
ATGCGCTGGGCGCAGCGCTTCCACATGGTCTACAACTACTGCTACGACCCCAAGCGGGAT
CATTCCCTCACCCCGGAATGCCGCACCCACCTGCACCCATCGTCCTCATCCTCCAACTCC
TCCTCGTCGTCGTACCACGGCTAG

Peptide Sequence

PEP ID

Os02t0823700-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:35376562:35378825:-1 gene:Os02g0823700 transcript:Os02t0823700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 22 description:Similar to Xyloglucan endotransglucosylase/hydrolase 9. (Os02t0823700-00)
Sequence

MAIIGRRQQQGVAAAAATLVALMAVVVAAAAEAQPSPGVYPSRMFRAREFGRDFRSLWGA
EHQQQEAAAPETGVTVWLDRRSGSGFKSRRAYRSGYFGAWVRLQRGYTAGVITAFYLSNG
EAHPGWHDEVDMEFLGTTPGKPYTLQTNVFSLGSGDPPRSLGREIKFHLWFDPTADFHHY
AILWTSDHIIFLVDDVPIRRYGRRSAGGAAGFPARPMWVYGSIWDASSWATEDGRYRADY
SYQPFVARFSAFLLRGCSPHAPRTCAAPVAGDLTAAQLAAMRWAQRFHMVYNYCYDPKRD
HSLTPECRTHLHPSSSSSNSSSSSYHG

Transcript Sequence

Transcript ID

Os02t0823700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35376562:35378825:-1 gene:Os02g0823700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 22 description:Similar to Xyloglucan endotransglucosylase/hydrolase 9. (Os02t0823700-00)
Sequence

ACGAGCTAGCATTATATTCGCCCTGAACAAATTAAGCTAGCAACTCCTCCGGTTTGTAAG
ATCGATCAATGGCTATCATTGGTCGGAGGCAGCAGCAGGGTGTCGCGGCGGCGGCGGCGA
CGTTGGTGGCGTTGATGGCGGTGGTGGTGGCGGCGGCGGCGGAAGCGCAGCCGTCGCCGG
GGGTGTACCCGAGCAGGATGTTCCGAGCGCGGGAGTTCGGGCGCGACTTCCGGAGCCTGT
GGGGGGCGGAGCACCAGCAGCAGGAGGCGGCGGCGCCGGAGACGGGGGTGACGGTGTGGC
TGGACCGGCGGTCGGGGAGCGGGTTCAAGTCGCGGCGGGCTTACCGGAGCGGGTACTTCG
GGGCGTGGGTGCGGCTGCAGCGCGGGTACACGGCGGGGGTGATCACCGCCTTCTACCTGT
CCAACGGCGAGGCGCACCCGGGGTGGCACGACGAGGTGGACATGGAGTTCCTCGGCACCA
CCCCCGGGAAGCCCTACACGCTGCAGACCAACGTCTTCTCCCTCGGCTCCGGCGACCCGC
CCCGGTCCCTCGGCCGCGAGATCAAGTTCCACCTCTGGTTCGACCCCACCGCCGACTTCC
ACCACTACGCCATCCTCTGGACATCCGACCACATCATCTTCTTGGTGGACGACGTGCCGA
TCCGGCGGTACGGGCGGCGGAGCGCGGGGGGCGCGGCGGGGTTCCCGGCGAGGCCGATGT
GGGTATACGGCTCCATCTGGGACGCGTCGTCGTGGGCGACGGAGGACGGCAGGTACAGGG
CGGACTACAGTTACCAGCCGTTCGTCGCGCGCTTCTCGGCCTTCCTCCTCCGGGGATGCT
CGCCGCACGCGCCCCGCACCTGCGCCGCCCCCGTCGCCGGCGACCTCACCGCCGCCCAGC
TCGCCGCCATGCGCTGGGCGCAGCGCTTCCACATGGTCTACAACTACTGCTACGACCCCA
AGCGGGATCATTCCCTCACCCCGGAATGCCGCACCCACCTGCACCCATCGTCCTCATCCT
CCAACTCCTCCTCGTCGTCGTACCACGGCTAGCTAACTACTGCTTAATTATCTAATACGC
CGCCATGTATACTCCATCTAATACGCTCCTCCGATCCTCAATTAAGCTATCTTTGTCGTC
TAATTAATTATATTGTGCCCCTGTTTGTCAATTAATCGTTTGTTTATATATATACTACTG
CAATGGATGAATGGGCATGCTGTTT