Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0822500-04
CDS Infomation	cds chromosome:IRGSP-1.0:2:35307514:35311920:-1 gene:Os02g0822500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Junctophilin-2 (Junctophilin type 2) (JP-2). (Os02t0822500-01);Similar to predicted protein. (Os02t0822500-02);Similar to Junctophilin-2 (Junctophilin type 2) (JP-2). (Os02t0822500-03);Hypothetical conserved gene. (Os02t0822500-04);Similar to phosphatidylinositol-4-phosphate 5-kinase 9. (Os02t0822500-05)
Sequence	TTGGGGAACACACCAGAGGGTTCAGGGAGGTATGTCTGGTCAGATGGTTGCACTTACGAT GGTGAGTGGAGGAGAGGGATGAGGCATGGGCAAGGAAAGACAATGTGGCCATCTGGAGCC ACCTACGAGGGTGAGTACTCTGGTGGCTACATTTATGGTGAAGGCACATATACCGGGTCT GACAACATCGTCTACAAGGGAAGGTGGAAATTGAATCGTAAGCATGGACTTGGATGCCAG ACGTACCCTAATGGAGACATGTTTGACGGTTCTTGGATTCAGGGAGAAATAGAAGGCCAT GGCAAGTATACGTGGGCAAATGGAAACACTTACGTTGGCAATATGAAGAATGGCAAGATG TCTGGGAAGGGAACTCTTACTTGGAAAAATGGGGATTCATATGAAGGAAACTGGTTAGAT GGCATGATGCACGGGTATGGAATCTATACATGGAATGAGTGTGGGTATTATGTTGGTACT TGGACCAAGGGACTGAAGGATGGGAAAGGCACATTCTATCCAAAAGGTTGCAGAGTTCCT GTTAATGATGAGCTCTACATCAATAATCTAAGAAACCGAGGTGTGCTGCCTGACATTAGA AGGCAGAATCACGGCTCACGCATCCTTCACTCTTCTTCGGTTGACATGGGGAACATGAAG GTTGGCTTAACTCGGGAATCTTCAGGTCCTTCATCTAGAAGGAACTCAAGTGAGCAACCT CATTCGAAAAATGTATCCTTGGAAAGACGGTGGAGCCTTGAGGTGGCCATTGAAAAATTC ATTGGCCATGACGCAACTGGAAGCTCTGGCCTAGAAAGATCTGAAAGCATTAATGATTCT GATCTGCCTATGCTGGAACGGGAATATATGCAAGGTGTTCTAATCAGCGAGGTAGTACTT GACAGGAGTTTTTCGGATTCGTCCAAGAAGGCAAAACGGCGCCAGAAGAAAATTGTTAGG GAGACAAAAAAGCCAGGAGAGACAATAATTAAGGGTCACAGAAGCTATGATCTTATGCTC AGTCTACAGCTTGGAATCAGGTACACGGTAGGAAAGATTACGCCCATTCAGAAACGTGAA GTCCGTGCTTCAGATTTTGGTCCACGAGCAAGTTTCTGGATGACCTTCCCCAAAGAAGGA TCACGACTTACTCCTTCACATCCTGCAGAAGACTTCAAATGGAAGGACTATTGTCCCATG GTTTTCAGAAATTTGAGGGAGATGTTCAAGATTGATGCTGCAGATTATATGATCTCTATA TGTGGAAATTCTGCACTTAGGGAGTTATCTTCTCCAGGAAAGAGTGGAAGTGTCTTTTTC CTATCACAAGATGATCGATTCATGATCAAGACTCTTCGGAAATCTGAAGTCCAGGTTCTG TTTTATGCTTAA

Peptide Sequence

PEP ID	Os02t0822500-04
PEP Infomation	pep chromosome:IRGSP-1.0:2:35307514:35311920:-1 gene:Os02g0822500 transcript:Os02t0822500-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Junctophilin-2 (Junctophilin type 2) (JP-2). (Os02t0822500-01);Similar to predicted protein. (Os02t0822500-02);Similar to Junctophilin-2 (Junctophilin type 2) (JP-2). (Os02t0822500-03);Hypothetical conserved gene. (Os02t0822500-04);Similar to phosphatidylinositol-4-phosphate 5-kinase 9. (Os02t0822500-05)
Sequence	LGNTPEGSGRYVWSDGCTYDGEWRRGMRHGQGKTMWPSGATYEGEYSGGYIYGEGTYTGS DNIVYKGRWKLNRKHGLGCQTYPNGDMFDGSWIQGEIEGHGKYTWANGNTYVGNMKNGKM SGKGTLTWKNGDSYEGNWLDGMMHGYGIYTWNECGYYVGTWTKGLKDGKGTFYPKGCRVP VNDELYINNLRNRGVLPDIRRQNHGSRILHSSSVDMGNMKVGLTRESSGPSSRRNSSEQP HSKNVSLERRWSLEVAIEKFIGHDATGSSGLERSESINDSDLPMLEREYMQGVLISEVVL DRSFSDSSKKAKRRQKKIVRETKKPGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQKRE VRASDFGPRASFWMTFPKEGSRLTPSHPAEDFKWKDYCPMVFRNLREMFKIDAADYMISI CGNSALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVQVLFYA

Transcript Sequence

Transcript ID	Os02t0822500-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35307514:35311920:-1 gene:Os02g0822500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Junctophilin-2 (Junctophilin type 2) (JP-2). (Os02t0822500-01);Similar to predicted protein. (Os02t0822500-02);Similar to Junctophilin-2 (Junctophilin type 2) (JP-2). (Os02t0822500-03);Hypothetical conserved gene. (Os02t0822500-04);Similar to phosphatidylinositol-4-phosphate 5-kinase 9. (Os02t0822500-05)
Sequence	TTGGGGAACACACCAGAGGGTTCAGGGAGGTATGTCTGGTCAGATGGTTGCACTTACGAT GGTGAGTGGAGGAGAGGGATGAGGCATGGGCAAGGAAAGACAATGTGGCCATCTGGAGCC ACCTACGAGGGTGAGTACTCTGGTGGCTACATTTATGGTGAAGGCACATATACCGGGTCT GACAACATCGTCTACAAGGGAAGGTGGAAATTGAATCGTAAGCATGGACTTGGATGCCAG ACGTACCCTAATGGAGACATGTTTGACGGTTCTTGGATTCAGGGAGAAATAGAAGGCCAT GGCAAGTATACGTGGGCAAATGGAAACACTTACGTTGGCAATATGAAGAATGGCAAGATG TCTGGGAAGGGAACTCTTACTTGGAAAAATGGGGATTCATATGAAGGAAACTGGTTAGAT GGCATGATGCACGGGTATGGAATCTATACATGGAATGAGTGTGGGTATTATGTTGGTACT TGGACCAAGGGACTGAAGGATGGGAAAGGCACATTCTATCCAAAAGGTTGCAGAGTTCCT GTTAATGATGAGCTCTACATCAATAATCTAAGAAACCGAGGTGTGCTGCCTGACATTAGA AGGCAGAATCACGGCTCACGCATCCTTCACTCTTCTTCGGTTGACATGGGGAACATGAAG GTTGGCTTAACTCGGGAATCTTCAGGTCCTTCATCTAGAAGGAACTCAAGTGAGCAACCT CATTCGAAAAATGTATCCTTGGAAAGACGGTGGAGCCTTGAGGTGGCCATTGAAAAATTC ATTGGCCATGACGCAACTGGAAGCTCTGGCCTAGAAAGATCTGAAAGCATTAATGATTCT GATCTGCCTATGCTGGAACGGGAATATATGCAAGGTGTTCTAATCAGCGAGGTAGTACTT GACAGGAGTTTTTCGGATTCGTCCAAGAAGGCAAAACGGCGCCAGAAGAAAATTGTTAGG GAGACAAAAAAGCCAGGAGAGACAATAATTAAGGGTCACAGAAGCTATGATCTTATGCTC AGTCTACAGCTTGGAATCAGGTACACGGTAGGAAAGATTACGCCCATTCAGAAACGTGAA GTCCGTGCTTCAGATTTTGGTCCACGAGCAAGTTTCTGGATGACCTTCCCCAAAGAAGGA TCACGACTTACTCCTTCACATCCTGCAGAAGACTTCAAATGGAAGGACTATTGTCCCATG GTTTTCAGAAATTTGAGGGAGATGTTCAAGATTGATGCTGCAGATTATATGATCTCTATA TGTGGAAATTCTGCACTTAGGGAGTTATCTTCTCCAGGAAAGAGTGGAAGTGTCTTTTTC CTATCACAAGATGATCGATTCATGATCAAGACTCTTCGGAAATCTGAAGTCCAGGTTCTG TTTTATGCTTAAATTTTCAGAGATCATATAAGCGTGCTAGAAAATTCTTTAATGGTAGAT TCTTCGATAAATTATACATTATAAGTAACACCACCTACTTAGCAAGCGGAAGTTAAAAAC ATTTCATGACTCTATATGATCCTTGCAGGTTCTTTTACGAATGCTTCCAAAATATTACCA TCATGTCCGTACTTATGAGAACACCCTCATAACTAAGTTTTTTGGCCTCCACAGGGTGAA GCCTTCTAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGTAACATGTTTTGCACGGAATT GAGGATTCATCGGAGATTTGATTTGAAAGGTTCATCCTTAGGCCGTTCTACTGACAAAAT CGAAATTGATGAGAACACAACTCTGAAGGATTTGGATCTTAACTATTCATTTTATCTTGA ACCTTCCTGGCGTGAGGCTTTACTTAAGCAGATTGAAACTGACAGTGAATTTCTAAGGAC CCAACGGATAATGGATTACAGCTTATTGCTTGGTGTGCACTATAGAGCTCCCCAGCACCT TCGGACGCGTGCATCTTATCATCGAAGCATGGCAGCAGATAGATTAACTGTTCTTTCAGA AGAAGACGCTCAGGAGGACGATGCTTTCAACTACCCGGAAGGTCTAGTGTTGGTTCAAAG AGGTGGTGATGAAAACAGTGTGGTTGTTGGCCCTCACATAAGAGGTAGCCGTTTACGATC AACAGCCGCTGGATTTGCGGAAGTAGATCTACTACTTCCTGGTACAGCCAGGCTGCAGAT CCAGCTAGGGGTTAACATGCCTGCAAGGGCAGAGCAGAACCCTAAAGAAGAGGAAAGCAA ATCGTTTCGGGAGGTGTACGACGTGGTCCTTTACCTGGGTATCATAGACATATTGCAGGA GTACAACATGTCAAAGAAGATAGAGCATGCCGTCAAGTCCATGCAGTACGACTCCATCTC CATCTCCGCCGTGGACCCCCAGTTCTACTCGGAGCGTTTCCTCAAGTTCATCCAGACCGT CTTTCCAGAAAATTCATAGTGCCCCAGCCAGCAGCCATTGCGATTATTTCGTCCGCGGAT TGATTCTCCTGCCTTGTGTTATGACATGAACTTCATTCATAGTGCCTCAGCAGCAGGTAC TAATTTTTTGCCGAGCAGCATCCTCCTTGAAACGATATGGCACTGCGGGATGGCAGGGAA AGCACGCGAATTTATTCTTTAGTTCTGAAGGTGCTGAAACTGAAATGTGCGAAAGGCGGT CATGGAGAACTGGAGATGGGAGAGAATTTGACGTCTTTCTCTTGATGGAAGGAAGGCACA ACCGCACATGTCTAGGGCAATGTACTACCGTCGGTGCCATGTGCTTGTGAGCCTCTCTTG TTTGGGCACAACACAACAAATCAGAAGCAAAAGCGCAGTGCACTCATATGTGCCAGAAAT ATATTTTCCATTCCAGAGTATACTGTTAGTTGTATAGGATTACAGTGAATTGCCACCTTG GTCTTAATGTTGTATGAAAGATTTTTCACGTTTTTGTG