Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0822300-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:35297501:35302032:1 gene:Os02g0822300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA-binding protein Nova-1. (Os02t0822300-00)
Sequence

ATGGAAGCCCCGGGCTCCCCCTACGCCTCCTCGCCGGAGTCCGCCCCCAAGCGCGCCCCC
CGCTCCTCGCCCCCGCCCCCGCAGCAGCAGGCCTCCTCCGAAGATGACAAGGAGAAGCCA
ACCCATCTGAGGTTTCTGGTATCAAACACGGCAGCAGGATGCATTATTGGCAAGGGTGGA
TCAACCATTAATGAATTTCAGTCCCAGTCTGGGGCTCGTATTCAGCTATCGCGTAGCCAT
GAGTTCTTCCCTGGTACAAATGACAGAATTATCATGGTTTCTGGTCTGTTTGATGAAGTA
ATAAAGGCCATGGAGCTGATTCTCGAGAAGCTTTTAGCTGAGGGGGAAGAAAGCAATGAA
GCTGAAGCTAGACCTAAAGTTAGACTTGTAGTTCCTAACAGTTCTTGTGGTGGAATCATT
GGTAAAGGAGGGTCAACAATCAAGTCATTCATTGAAGACTCACATGCTGGAATCAAGATT
TCACCACAGGATAACAATTTTGTTGGTTTGCATGATAGACTCGTTACTGTCACAGGACCC
TTGGACCATCAGATGCGTGCAATATATTTGATATTAAGCAAGTTATCGGAGGACGTTCAC
TACCCACCTAATCTGAGTTCCCCATTTCCATATGCAGGCCTTGGTTTCCCTAGTTACCCT
GGTGTTCCTGTTGGGTATATGATCCCACAGGTGCCGTATAATAATGCTGTGAACTATGGA
CCTAATGGGTATGGAGGAAGGTACCAAAACAACAAGGTTAGTGATTGCTGCTGCTTTACT
CTTCCCAGTACACCTATGAGATCACCTGCTAACAATGATGCCCAAGATTCTCTCACTATT
GGTATTGCTGATGAACATATTGGTGCTGTCGTAGGACGTGCCGGAAGGAACATTACAGAG
ATCATTCAGGCTAGTGGTGCCAGGATCAAGATATCTGATAGGGGTGACTTCATTGCTGGC
ACATCTGAGAGGAAAGTGACGATAACTGGAACATCAGAAGCTATTCAGGCAGCAGAGTCT
ATGATAATGCAGAGGGTGACAGCCAGTTCCGAGAGGTGA

Peptide Sequence

PEP ID

Os02t0822300-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:35297501:35302032:1 gene:Os02g0822300 transcript:Os02t0822300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA-binding protein Nova-1. (Os02t0822300-00)
Sequence

MEAPGSPYASSPESAPKRAPRSSPPPPQQQASSEDDKEKPTHLRFLVSNTAAGCIIGKGG
STINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELILEKLLAEGEESNE
AEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGP
LDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAVNYG
PNGYGGRYQNNKVSDCCCFTLPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITE
IIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRVTASSER

Transcript Sequence

Transcript ID

Os02t0822300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35297501:35302032:1 gene:Os02g0822300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA-binding protein Nova-1. (Os02t0822300-00)
Sequence

TTGCCTCTCTCCCCCCTCCACGCCTCCACCCCCACCCCCACCCCCACCACTCCCCCCCCC
CTCCGCCTCCGCCCTCCGCCGCCGCCGCCATGGAAGCCCCGGGCTCCCCCTACGCCTCCT
CGCCGGAGTCCGCCCCCAAGCGCGCCCCCCGCTCCTCGCCCCCGCCCCCGCAGCAGCAGG
CCTCCTCCGAAGATGACAAGGAGAAGCCAACCCATCTGAGGTTTCTGGTATCAAACACGG
CAGCAGGATGCATTATTGGCAAGGGTGGATCAACCATTAATGAATTTCAGTCCCAGTCTG
GGGCTCGTATTCAGCTATCGCGTAGCCATGAGTTCTTCCCTGGTACAAATGACAGAATTA
TCATGGTTTCTGGTCTGTTTGATGAAGTAATAAAGGCCATGGAGCTGATTCTCGAGAAGC
TTTTAGCTGAGGGGGAAGAAAGCAATGAAGCTGAAGCTAGACCTAAAGTTAGACTTGTAG
TTCCTAACAGTTCTTGTGGTGGAATCATTGGTAAAGGAGGGTCAACAATCAAGTCATTCA
TTGAAGACTCACATGCTGGAATCAAGATTTCACCACAGGATAACAATTTTGTTGGTTTGC
ATGATAGACTCGTTACTGTCACAGGACCCTTGGACCATCAGATGCGTGCAATATATTTGA
TATTAAGCAAGTTATCGGAGGACGTTCACTACCCACCTAATCTGAGTTCCCCATTTCCAT
ATGCAGGCCTTGGTTTCCCTAGTTACCCTGGTGTTCCTGTTGGGTATATGATCCCACAGG
TGCCGTATAATAATGCTGTGAACTATGGACCTAATGGGTATGGAGGAAGGTACCAAAACA
ACAAGGTTAGTGATTGCTGCTGCTTTACTCTTCCCAGTACACCTATGAGATCACCTGCTA
ACAATGATGCCCAAGATTCTCTCACTATTGGTATTGCTGATGAACATATTGGTGCTGTCG
TAGGACGTGCCGGAAGGAACATTACAGAGATCATTCAGGCTAGTGGTGCCAGGATCAAGA
TATCTGATAGGGGTGACTTCATTGCTGGCACATCTGAGAGGAAAGTGACGATAACTGGAA
CATCAGAAGCTATTCAGGCAGCAGAGTCTATGATAATGCAGAGGGTGACAGCCAGTTCCG
AGAGGTGATAAAATCTCATGAAGACGAGGGGCATCATCTGATGGAAAAGAAGCCTGATGC
CAAGTTAGGAGGAGGGGTTGGAGATTGTCTTTTCTAGTTTTAGCACTATCCGCAAAAAAA
GCTTGAGAGAAAATTTAAGATAATCTATTGTTCCTTATTGAGTCTGATTGTGTTAGTAAC
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