Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0822100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:35286788:35290691:1 gene:Os02g0822100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:silicon efflux transporter 3, Si efflux transporter 3 description:Divalent ion symporter domain containing protein. (Os02t0822100-01);Similar to arsenite transport subunit B. (Os02t0822100-02)
Sequence	ATGGCGATGGAGCCGACGGTGAAGGTGGCGCTGGGGACGGCGGCGTTCGGGATCTTCTGG GTGCTGGCGGTGTTCCCGGCGGTGCCATTCCTGCCGATCGGGAGGACGGCGGGGTCGCTG CTGGGCGCGATGCTGATGGTGCTGTTCGGCGTGATGTCCGCCGACGAGGCGTACGCCGCC GTGGACCTCCCCATCCTCGGCCTCCTGTTCGGCACCATGGTGGTGAGCGTCTACCTGGAG CGCGCCGACATGTTCAAGCACCTCGGGAGGCTGCTGTCATGGCGGAGCCAGGGCGGCAAG GACCTGCTCGTCCGCACCTGCGTCGTGGCGGCGCTCGCGTCGGCGCTCTTCACCAACGAC ACCTGCTGCGTCGTGCTCACCGAGTTCATCCTCAAGATCGCGCGGCAGAACAACCTCCCG CCCAAGCCGTTCCTCCTGGCGCTCGCGTCCAGCGCCAACATCGGCTCCGCCGCGACGCCC ATCGGCAACCCGCAGAACCTGGTCATCGCCGTCCAGAGCGGCATCTCCTTCGGCCAGTTC GTGTTCGGCATCCTCCCGGCCACCCTCGTCGGCGCCGTCGTCAACGCCGCCATCCTGCTC TGCCTCTACTGGCGCCACCTCTCCGACGAGAAGTGCGTCGAGGTCGTCGCCCCGGTCCCC ACCGACGTCGTCGAAGAGGAGGACGTCACCTCCCACCGCTTCTCGCCGGCGACCATGTCA CACCCCCGTTCCTCCTCCCACCACCACCACCACCAGCAGCCTGGCAGCTCGCTGTCGTCG CCTGACTGCGAGGTGTTCGAGCCAGTGAAGCCCGTCCCTGTCACCAGCAATGGCGACTCC AACAACAAGCCGGACGCCGCCGACGCCGCCGTCGTCGTCGGGATCCACCAGAGGCGCGGC GGCGTCGGCGGCGGCGTGAGGATGAAGGAGGAACATGCGTTCCGGTGGGTGGAGGAGAAG GAGGAGGCCATGGAGCAATGGAAGAGCACGGTGTGGAAGACGGGTGTGTACGTCATCACA TTGAGCATGCTGGTGGCGCTGCTGTTGGGTCTCAACATGTCATGGAGCGCCATCACCGCC GCACTCGCCCTCATCGTCCTCGACTTCAAGGATGCCCGCCCCTGCCTCGAGAAGGTTTCC TATCCACTTCTACTCTTCTTCTGTGGGATGTTCATCACTGTGGATGGATTCAACAAGACG GGCATTCCTAGCGCATTCTGGGAATTCATGGAGCCCTATGCACGGATCGATACACCGACC GGGATAGTAATCCTCGCCCTGGTTATTCTTCTCCTCTCAAATGTGGCGTCAAATGTTCCA ACTGTTCTCCTGCTTGGTGCTCGGGTGGCAGCGTCAGCAGCGGCCATCTCCCCTGCAGCA GAGACCAATGCCTGGCTCATCCTGGCCTGGGTCAGCACGGTGGCCGGCAACCTCTCCCTC CTTGGCTCCGCCGCGAACTTGATCGTTTGCGAGCAAGCTCGCAGGTCGGAGCAGTACGGA TACACCCTCTCCTTCTTCAGCCACCTCCAGTTCGGCTTCCCGGCGACGCTCATCGTCACC GGGATTGGCCTACTGCTCATCAGAAGCAACTGA

Peptide Sequence

PEP ID	Os02t0822100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:35286788:35290691:1 gene:Os02g0822100 transcript:Os02t0822100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:silicon efflux transporter 3, Si efflux transporter 3 description:Divalent ion symporter domain containing protein. (Os02t0822100-01);Similar to arsenite transport subunit B. (Os02t0822100-02)
Sequence	MAMEPTVKVALGTAAFGIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVLFGVMSADEAYAA VDLPILGLLFGTMVVSVYLERADMFKHLGRLLSWRSQGGKDLLVRTCVVAALASALFTND TCCVVLTEFILKIARQNNLPPKPFLLALASSANIGSAATPIGNPQNLVIAVQSGISFGQF VFGILPATLVGAVVNAAILLCLYWRHLSDEKCVEVVAPVPTDVVEEEDVTSHRFSPATMS HPRSSSHHHHHQQPGSSLSSPDCEVFEPVKPVPVTSNGDSNNKPDAADAAVVVGIHQRRG GVGGGVRMKEEHAFRWVEEKEEAMEQWKSTVWKTGVYVITLSMLVALLLGLNMSWSAITA ALALIVLDFKDARPCLEKVSYPLLLFFCGMFITVDGFNKTGIPSAFWEFMEPYARIDTPT GIVILALVILLLSNVASNVPTVLLLGARVAASAAAISPAAETNAWLILAWVSTVAGNLSL LGSAANLIVCEQARRSEQYGYTLSFFSHLQFGFPATLIVTGIGLLLIRSN

Transcript Sequence

Transcript ID	Os02t0822100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35286788:35290691:1 gene:Os02g0822100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:silicon efflux transporter 3, Si efflux transporter 3 description:Divalent ion symporter domain containing protein. (Os02t0822100-01);Similar to arsenite transport subunit B. (Os02t0822100-02)
Sequence	GGGTGTACACATCATCCTCATCAATGAGTAGAGAGAAGAGTAGAGGGTAGTAGAGAGCCA AAAAAAATCGATCATGGAGAGGCCATGTGGAGCTCGCCAAGTGTGAGCATTTACCTTCTT GGAAAGAATCCCAAGCTAGAAATCCACAGAATTATCTGCTCTCAAACATTGGCTCATCTG CTCAACAATCCTATCCTCCTCCTCCTCCTCACTGGCAGTGATTCCCCCAACCCCATTTCT CTCTGAATTGGGCTTGTTTCTTTGCTGAATTATTATTTTGCTCATTCCACTCTGGTTGCT TGTTCAGAGACTCCATGTACAATTAGTTGACCATTCTTCTAGTTAGCTTCTCTTGTGTTC TTGGAGTTGGAGCTGGTCTGTCCATGTGAGCCATGTTGCAGATTGGGCTAGCTTTGGGAG CAAGAGAGTGGTAGATCTTCTTCTTGCCAGATTTATTGTAGATACAATACAATCCCATTT CTTGTTCAGATTTCTTGGTGAAAATTCCTAGCTAGATCCATACTTTCTCCAGTGTAGTGT GTAGAGAAGAAGAGGCCTTGTGAATCTTATCTTGGGAAAAAGAGGTATATCCATCCACCC ATCTGTGTGCTGTTCTTGATTGGCGGCAATGGCGATGGAGCCGACGGTGAAGGTGGCGCT GGGGACGGCGGCGTTCGGGATCTTCTGGGTGCTGGCGGTGTTCCCGGCGGTGCCATTCCT GCCGATCGGGAGGACGGCGGGGTCGCTGCTGGGCGCGATGCTGATGGTGCTGTTCGGCGT GATGTCCGCCGACGAGGCGTACGCCGCCGTGGACCTCCCCATCCTCGGCCTCCTGTTCGG CACCATGGTGGTGAGCGTCTACCTGGAGCGCGCCGACATGTTCAAGCACCTCGGGAGGCT GCTGTCATGGCGGAGCCAGGGCGGCAAGGACCTGCTCGTCCGCACCTGCGTCGTGGCGGC GCTCGCGTCGGCGCTCTTCACCAACGACACCTGCTGCGTCGTGCTCACCGAGTTCATCCT CAAGATCGCGCGGCAGAACAACCTCCCGCCCAAGCCGTTCCTCCTGGCGCTCGCGTCCAG CGCCAACATCGGCTCCGCCGCGACGCCCATCGGCAACCCGCAGAACCTGGTCATCGCCGT CCAGAGCGGCATCTCCTTCGGCCAGTTCGTGTTCGGCATCCTCCCGGCCACCCTCGTCGG CGCCGTCGTCAACGCCGCCATCCTGCTCTGCCTCTACTGGCGCCACCTCTCCGACGAGAA GTGCGTCGAGGTCGTCGCCCCGGTCCCCACCGACGTCGTCGAAGAGGAGGACGTCACCTC CCACCGCTTCTCGCCGGCGACCATGTCACACCCCCGTTCCTCCTCCCACCACCACCACCA CCAGCAGCCTGGCAGCTCGCTGTCGTCGCCTGACTGCGAGGTGTTCGAGCCAGTGAAGCC CGTCCCTGTCACCAGCAATGGCGACTCCAACAACAAGCCGGACGCCGCCGACGCCGCCGT CGTCGTCGGGATCCACCAGAGGCGCGGCGGCGTCGGCGGCGGCGTGAGGATGAAGGAGGA ACATGCGTTCCGGTGGGTGGAGGAGAAGGAGGAGGCCATGGAGCAATGGAAGAGCACGGT GTGGAAGACGGGTGTGTACGTCATCACATTGAGCATGCTGGTGGCGCTGCTGTTGGGTCT CAACATGTCATGGAGCGCCATCACCGCCGCACTCGCCCTCATCGTCCTCGACTTCAAGGA TGCCCGCCCCTGCCTCGAGAAGGTTTCCTATCCACTTCTACTCTTCTTCTGTGGGATGTT CATCACTGTGGATGGATTCAACAAGACGGGCATTCCTAGCGCATTCTGGGAATTCATGGA GCCCTATGCACGGATCGATACACCGACCGGGATAGTAATCCTCGCCCTGGTTATTCTTCT CCTCTCAAATGTGGCGTCAAATGTTCCAACTGTTCTCCTGCTTGGTGCTCGGGTGGCAGC GTCAGCAGCGGCCATCTCCCCTGCAGCAGAGACCAATGCCTGGCTCATCCTGGCCTGGGT CAGCACGGTGGCCGGCAACCTCTCCCTCCTTGGCTCCGCCGCGAACTTGATCGTTTGCGA GCAAGCTCGCAGGTCGGAGCAGTACGGATACACCCTCTCCTTCTTCAGCCACCTCCAGTT CGGCTTCCCGGCGACGCTCATCGTCACCGGGATTGGCCTACTGCTCATCAGAAGCAACTG AAAAATGGTACAGAACATATATATGAAGAAGACATGGATATCAGGACATGTACAAAAAGA ATGTGAATTTTCAGGTCAGGTCGATTGTATTTCTGCAAAGATTCAATTGTGGGATAAAAG AAAAATGTCTATCTTTGCCTCGGAATTAAGCACGGATATCATGGTGCTTGGAGGCTTTTT GAGCTGTACATTTGTTAGTTCATATTGGGGGGAGAAGATGTATATGTTGCAGTAGCAAGG ATCATAAAAGGGAAATGTATATTTTTGTTCAGCATTCTACTTGTAATCCATATATATTTT TTGAAGTCGAATAATTTGTATAGGCAGGAGAAGAGAAAATCAATGAAATGCATGCCCCTA TCGATGC