Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0821800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:35271599:35274767:1 gene:Os02g0821800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 18_1, Mediator 36_1 description:Similar to Fibrillarin-2. (Os02t0821800-01);Similar to Fibrillarin-2. (Os02t0821800-02)
Sequence	ATGAGGCCACCGCGAGGGAGGGGATTCGGGAGGGGAGGGAGAGGCGATGGCGGCGGCCGC AGTGGCGGCGGTGGGAGGGGATTCGGGAGGGGCGGGGACAGCGGAGGGAGAGGAGGCCGT GGGAGGGGAGGTGGCAGGACGCCAAGGGGCCGTGGCGGCGGCCGCGGTGGCGGGAGGGGT GGCATGAAGGGCGGGAGCAAGGTGGTCGTGGTGCCGCACAAGCACAACGGCGTCTTCATC GCCAAGGCCAAGGAGGACGCGCTCTGCACCAAGAACATGGTCCCCGGCGAGTCCGTCTAC GGAGAGAAGCGTATCTCAGTCCAGAATGAGGATGGAACTAAGGTTGAATACAGGGTGTGG AACCCCTTCCGTTCTAAGCTGGCTGCTGCTGTGCTTGGTGGTGTCGACAACATCTGGATT GCTCCTGGTACTCGTGTGTTATATCTCGGTGCTGCCTCAGGAACAACAGTGTCTCATGTG TCCGATATTGTTGGACCGACTGGTTTGGTCTACGCTGTTGAGTTCTCGCACAGGAGTGGT AGGGATCTTGTTAACATGGCCAAAAAGAGGACTAATGTGATCCCCATCATTGAGGATGCT AGGCACCCAGCAAGGTACCGGATGTTGGTTGGCATGGTTGATGTTATCTTCTCTGATGTT GCCCAGCCAGATCAGGGGCTTTAG

Peptide Sequence

PEP ID	Os02t0821800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:35271599:35274767:1 gene:Os02g0821800 transcript:Os02t0821800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 18_1, Mediator 36_1 description:Similar to Fibrillarin-2. (Os02t0821800-01);Similar to Fibrillarin-2. (Os02t0821800-02)
Sequence	MRPPRGRGFGRGGRGDGGGRSGGGGRGFGRGGDSGGRGGRGRGGGRTPRGRGGGRGGGRG GMKGGSKVVVVPHKHNGVFIAKAKEDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVW NPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPTGLVYAVEFSHRSG RDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQGL

Transcript Sequence

Transcript ID	Os02t0821800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:35271599:35274767:1 gene:Os02g0821800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 18_1, Mediator 36_1 description:Similar to Fibrillarin-2. (Os02t0821800-01);Similar to Fibrillarin-2. (Os02t0821800-02)
Sequence	AAACCCTAATCCCCCTCCAAAACCCTACACCCACCCCCTCACCTGCGGCGGCTGCGGCGG CGGCGGAGAGCAACATCGTCGAGTCGACGCCATGAGGCCACCGCGAGGGAGGGGATTCGG GAGGGGAGGGAGAGGCGATGGCGGCGGCCGCAGTGGCGGCGGTGGGAGGGGATTCGGGAG GGGCGGGGACAGCGGAGGGAGAGGAGGCCGTGGGAGGGGAGGTGGCAGGACGCCAAGGGG CCGTGGCGGCGGCCGCGGTGGCGGGAGGGGTGGCATGAAGGGCGGGAGCAAGGTGGTCGT GGTGCCGCACAAGCACAACGGCGTCTTCATCGCCAAGGCCAAGGAGGACGCGCTCTGCAC CAAGAACATGGTCCCCGGCGAGTCCGTCTACGGAGAGAAGCGTATCTCAGTCCAGAATGA GGATGGAACTAAGGTTGAATACAGGGTGTGGAACCCCTTCCGTTCTAAGCTGGCTGCTGC TGTGCTTGGTGGTGTCGACAACATCTGGATTGCTCCTGGTACTCGTGTGTTATATCTCGG TGCTGCCTCAGGAACAACAGTGTCTCATGTGTCCGATATTGTTGGACCGACTGGTTTGGT CTACGCTGTTGAGTTCTCGCACAGGAGTGGTAGGGATCTTGTTAACATGGCCAAAAAGAG GACTAATGTGATCCCCATCATTGAGGATGCTAGGCACCCAGCAAGGTACCGGATGTTGGT TGGCATGGTTGATGTTATCTTCTCTGATGTTGCCCAGCCAGATCAGGGGCTTTAGCAAAT GAGGAACTTACTCGGATTCCCCTTCAGGACATCAAATTGGATGATGCAAATTCGAGTTTC CAATGCGCCGTGCCTTCATTGTTTCTTTCCTTTGCGTTTATGGGTATTCTGAATAAAATA TTTTGACTGTGCTAGCAATTTGCCTTATGCCTGTTTTATTCTCTCGTTAGTTGTAAAACC TTCAGTATCGAAGTTGATGCGTGCCTTATTGGTGGCCAATAGTCATGTTTTTGTCCATAT TCATTTCCTTGGCATGATCTTGTTTATTTTCTTGACTACATCAGCTGTGGTAGGAATTTA TAGGTTTCCTGGTATAGCGTTCTCTCCTATTGTTATTATGTTTTATGCCTCTTTGATAGT GCTAGTTAGGACCAGATTGTTATGTTTTTGCTTTGTAAGGAGTAATGAATACTGTGGAGA TAAAAGTTTACGGTTCATATTTCTGTACTGAATAAACATACTTGCAGTAGTTTCTATAAG GTTGCTGCTCGAGTTAAGAGATAATTTGTATCCCATAAAATTACCTTTATGGAATCTTCC TTGGCATGTCCCTGTGTTAAAAATCGTGAAGGTTCTCACAGAATTCAGTTTTGAAACCGT TTGCAATTTTAATCTTCTACTACCCTGCAGGCTAGGATCTTAGCCCTCAACGCATCCTAC TTCCTGAAGAATGGTGGGCATTTTGTCATTTCAATCAAGGCGAACTGTATCGACTCCACC ATGCCAGCTGAGGCTGTGTTCGCTAGCGAGGTTGAGAAGCTGAAGGCGGATCAGTTCAAG CCGTCGGAGCAGGTGACCCTGGAGCCCTTCGAGCGTGACCATGCCTGCGTCGTTGGTGGC TACAGGATGCCCAAGAAGCAAAAGGGCACATCTTAATTTAAGGATACGGCCATCTGCGGT CAAAGCTCAAATGTACTAGTAGAACTTTTTATAAGCGTTAGCGTTTTTGCTTAAGCTATT TTAATTAGTTCATGCTGCTGCTGGTTTTACAGCAATCCATGTGTACCGCGAACAGAGAAG TTGAAATTGGTTGAATCGACGCT