Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0820600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35230738:35233962:-1 gene:Os02g0820600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0820600-01)
Sequence

ATGGCTTCCGACGACCTCTTCGAGGGCCTACCACCTCCCGCCGCCGCCGCCGCGCCGGCC
GCCGGAGGAGAGCGCGCGCCTTCACCATCGCCGCCTCCGCCTCCGAGACTGCCCGCGCTG
AAGAGCGCTCTCAAGCGGGACAAGCTCTCTTCCTCAGATGCTGCCGCTTCCTCACCCGCT
GCCGCCGCCGCCACGGATGCCGCAGCCGAAGGACGTGCTCCTGAGAAGCGACTTAGGTTT
AGAACTACTGTTGATGCCTCAGAAACGCAAGTCATTGATGCTATGCACAAGATAACTTCA
CACATACGGAATCCTTCAAAATTCAGCAAGGCATCAAAACTAGCTCTACAGCTTATTGAG
GCTGGGAGTGTCAAGCCAGGGACAATCAGTCACTTCTTTGCTATATTAGAGGCTGCAATG
TCTTCACCAGGAGCTTGTAATGAGCCTTCTGTACGTGCTGATTACCAGGCTTTGTTTAAT
GCAGCCCAGGGTGTAACAGAGTGTTTCAACCAACAACAGAAAAATCAGTTTGATATATGG
GTGCTGCATGCAGTGGTGGCAAATGATCTTTTTACGGATGACAGTTTTGTGTTCTCAAAG
GCTGTAGGGAAGATCAAAGATGCCATCTCAGCCCTGCCAATCACAACAGTGGATGATGAC
AATGATGAAGCAGCAGCTCTAGCAGCTGTTGAAAGTAATAACACAGATGATAACCCGCAA
GCTGCGGCATCCAACTCGTTGCCAGATGATAGCACTCATGCTGCAGCCTCCAACTCAAGT
GAGGAATCCTCTGATCCTTTTGGTTTGGATGGTCTACTTGAGCACAAGTCAAAGAAGTCT
GAAAAGGCTCGAGAGAAGACGGTCGCCGCTCTAAATAGGAAAGCAGATGAGGATGAATCA
AAGAGATTTCTGAAGTCACAACGAGAAGCCCTCCTGAAATGTCTAGAAATAGCTGCTCGG
CGCTATAGGATTCCGTGGACACAGACCGCCATTGACATCTTTGCGAAGCACGCCTACGAC
AACATGAACCGGTTCACGACGCAGCAGAGGGACGCCATCACGAAGCTGTGGAACTCGATC
AAGGAGCAGCAGATCAGGCGGAAGCAGGGCAAGTCGGTGAGCGGGAAGCTTGATGTCAAC
GCGTTCGAGTACCTCCAGGAGAAGTACTCCCATGAGAAGATCAGCATCCGCCATGCTGTA
GGCGGTGGCGGTGAACGGCGCGCCACTCAGTGGCTCGGCTAA

Peptide Sequence

PEP ID

Os02t0820600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35230738:35233962:-1 gene:Os02g0820600 transcript:Os02t0820600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0820600-01)
Sequence

MASDDLFEGLPPPAAAAAPAAGGERAPSPSPPPPPRLPALKSALKRDKLSSSDAAASSPA
AAAATDAAAEGRAPEKRLRFRTTVDASETQVIDAMHKITSHIRNPSKFSKASKLALQLIE
AGSVKPGTISHFFAILEAAMSSPGACNEPSVRADYQALFNAAQGVTECFNQQQKNQFDIW
VLHAVVANDLFTDDSFVFSKAVGKIKDAISALPITTVDDDNDEAAALAAVESNNTDDNPQ
AAASNSLPDDSTHAAASNSSEESSDPFGLDGLLEHKSKKSEKAREKTVAALNRKADEDES
KRFLKSQREALLKCLEIAARRYRIPWTQTAIDIFAKHAYDNMNRFTTQQRDAITKLWNSI
KEQQIRRKQGKSVSGKLDVNAFEYLQEKYSHEKISIRHAVGGGGERRATQWLG

Transcript Sequence

Transcript ID

Os02t0820600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35230738:35233962:-1 gene:Os02g0820600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0820600-01)
Sequence

AGCAGGAGGAGACCAAGACACCGGCCATGGCTTCCGACGACCTCTTCGAGGGCCTACCAC
CTCCCGCCGCCGCCGCCGCGCCGGCCGCCGGAGGAGAGCGCGCGCCTTCACCATCGCCGC
CTCCGCCTCCGAGACTGCCCGCGCTGAAGAGCGCTCTCAAGCGGGACAAGCTCTCTTCCT
CAGATGCTGCCGCTTCCTCACCCGCTGCCGCCGCCGCCACGGATGCCGCAGCCGAAGGAC
GTGCTCCTGAGAAGCGACTTAGGTTTAGAACTACTGTTGATGCCTCAGAAACGCAAGTCA
TTGATGCTATGCACAAGATAACTTCACACATACGGAATCCTTCAAAATTCAGCAAGGCAT
CAAAACTAGCTCTACAGCTTATTGAGGCTGGGAGTGTCAAGCCAGGGACAATCAGTCACT
TCTTTGCTATATTAGAGGCTGCAATGTCTTCACCAGGAGCTTGTAATGAGCCTTCTGTAC
GTGCTGATTACCAGGCTTTGTTTAATGCAGCCCAGGGTGTAACAGAGTGTTTCAACCAAC
AACAGAAAAATCAGTTTGATATATGGGTGCTGCATGCAGTGGTGGCAAATGATCTTTTTA
CGGATGACAGTTTTGTGTTCTCAAAGGCTGTAGGGAAGATCAAAGATGCCATCTCAGCCC
TGCCAATCACAACAGTGGATGATGACAATGATGAAGCAGCAGCTCTAGCAGCTGTTGAAA
GTAATAACACAGATGATAACCCGCAAGCTGCGGCATCCAACTCGTTGCCAGATGATAGCA
CTCATGCTGCAGCCTCCAACTCAAGTGAGGAATCCTCTGATCCTTTTGGTTTGGATGGTC
TACTTGAGCACAAGTCAAAGAAGTCTGAAAAGGCTCGAGAGAAGACGGTCGCCGCTCTAA
ATAGGAAAGCAGATGAGGATGAATCAAAGAGATTTCTGAAGTCACAACGAGAAGCCCTCC
TGAAATGTCTAGAAATAGCTGCTCGGCGCTATAGGATTCCGTGGACACAGACCGCCATTG
ACATCTTTGCGAAGCACGCCTACGACAACATGAACCGGTTCACGACGCAGCAGAGGGACG
CCATCACGAAGCTGTGGAACTCGATCAAGGAGCAGCAGATCAGGCGGAAGCAGGGCAAGT
CGGTGAGCGGGAAGCTTGATGTCAACGCGTTCGAGTACCTCCAGGAGAAGTACTCCCATG
AGAAGATCAGCATCCGCCATGCTGTAGGCGGTGGCGGTGAACGGCGCGCCACTCAGTGGC
TCGGCTAAAACTACGAGGTAAGGTTGCTGTCTGCTGATGTACACTGGTGTGAGGTCGCTC
AGCGGAAGAAACTGCAAGAAACTCGATGATTATTCCACAACGACGGCATTCATTTTGAGA
TGTTGTGTACATCAGCATGGGTTGTGAGTATGTGACATATACGGATGATGCAATTGCTTG
GAATTTTGATGGCAAGAATGCGATTTATACTTTGATGATATAGCTGGGCAGCTGGCTGGC
TATGTACATGGGTACGTTGTCATTGATGGATCTCCATTCTTGTGATCTCACCTATCTTGT
AAACTTGTAGTAGCTGAATGAGAGGAG