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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0819700-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:35199423:35200895:-1 gene:Os02g0819700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Zim17-type family protein. (Os02t0819700-01);Zinc finger, Zim17-type family protein. (Os02t0819700-02)
Sequence

ATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCG
CCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGA
TCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATA
GAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAA
GTTAGAGATACATCAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACG
TGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGA
GTGGTGGTCGCTCGTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATAGGCTTGGC
TGGTTTGGGGAGCCAGGAAGCATCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAG
AAAGGCTCAACAGATACTCTTAACTTCACTCTTGAGGACTTGGTTGGGTCTCAGGCTAAT
GATAAGGGCCCTTCTGATAAAAAATAG

Peptide Sequence

PEP ID

Os02t0819700-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:35199423:35200895:-1 gene:Os02g0819700 transcript:Os02t0819700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Zim17-type family protein. (Os02t0819700-01);Zinc finger, Zim17-type family protein. (Os02t0819700-02)
Sequence

MATRFLPLVRRGLAGVLNQSPAPASTRGFLFPAPVTAGIRSLQTIMEASNNASDDRNQDI
EDSKTDTVPATVPSSDSGFKVRDTSNLKISPRHDLAMIFTCKVCETRSMKMASKESYEKG
VVVARCGGCNNFHLIADRLGWFGEPGSIEDFLAEQGEEVKKGSTDTLNFTLEDLVGSQAN
DKGPSDKK

Transcript Sequence

Transcript ID

Os02t0819700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35199423:35200895:-1 gene:Os02g0819700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Zim17-type family protein. (Os02t0819700-01);Zinc finger, Zim17-type family protein. (Os02t0819700-02)
Sequence

GACCGTTTCTTCGCCGACAAGAAGAAGAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCGAC
CAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTC
TGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAG
GATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAG
CAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCG
TGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACATCAAACTTGA
AGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGT
CTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGAGTGGTGGTCGCTCGTTGCGGCG
GCTGCAATAATTTCCACCTGATCGCGGATAGGCTTGGCTGGTTTGGGGAGCCAGGAAGCA
TCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTA
ACTTCACTCTTGAGGACTTGGTTGGGTCTCAGGCTAATGATAAGGGCCCTTCTGATAAAA
AATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAA
GGAAATCCACAAGTTTTTTACTCGATATCATGACTTCTCAAGGTGGAGTAGTCCAACTTT
TTGCACTTGTTAGTTCTGATGTTATTGCAGTGTAATTGTCAATTCTCAACCTTGTGGCTA
AGTCCACCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGG
CTGTGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATGT
TTCCCTTTG