Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0818900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:35130674:35131877:1 gene:Os02g0818900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os02t0818900-01)
Sequence

ATGGGGAAGAAGAGCAAGAACGGCGGCGGAGGAGGAGGCGAGAAGAAGGCGACGACGACG
GAGGTGGTGCTGACGGTGGCCATGCACTGCAAATGCAATGGCTGCAAGGACAAGATCCGT
AATGGCGTCAAGGAACTCGCCCTCGTCCCAGGGGTGGAGGCGGTGGACAAGTCGGCGGTG
GAAAGCAAAGGGGAGGTGAGGCTGGTGGTGGCGGCCGCGACGGCGAAGCCCGAGAAGCTC
AAGGACCGCCTCCACAGGGTCACCGGCAAGAAAGTCGACCTCCTCGTCATCGCGCCGCCC
AAGCCTGCCGCCGCCGCCGACGACGACGACAAGGCCGCCGCCGCCGAAGCGGTTGCCGCG
CTGATCAGGCAGGCGCAGGCGCAGGCGGGCGTCCACGTCGTCCCGGGCGCGTGGGCGGGC
GGCGGCGCGGTGGCGTACCCGGCGTGGGGAATGCAGCAGCCGGAGGGCGGGTACTACTAC
TCGCCGTCGACTTACCCTGCAGGCGGCTTGGTCTACCCCTACGCGGCGGCGTATCCACCT
CCCGGTCAGCAGCTGCTCGGCAATGGCGGCGGCGTGGTGTCGCCATGGTACACTCATGGC
TACTAG

Peptide Sequence

PEP ID

Os02t0818900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:35130674:35131877:1 gene:Os02g0818900 transcript:Os02t0818900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os02t0818900-01)
Sequence

MGKKSKNGGGGGGEKKATTTEVVLTVAMHCKCNGCKDKIRNGVKELALVPGVEAVDKSAV
ESKGEVRLVVAAATAKPEKLKDRLHRVTGKKVDLLVIAPPKPAAAADDDDKAAAAEAVAA
LIRQAQAQAGVHVVPGAWAGGGAVAYPAWGMQQPEGGYYYSPSTYPAGGLVYPYAAAYPP
PGQQLLGNGGGVVSPWYTHGY

Transcript Sequence

Transcript ID

Os02t0818900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:35130674:35131877:1 gene:Os02g0818900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os02t0818900-01)
Sequence

AGTCATCTCACATCTCATCCATTCTTTTTCTCATCTTCTTCTTGCTTCCATCGCAACAGC
AGCAGAGCAGCTACTACTAGTTGATCTCACTTGAGAGAAAGGGATCCATCCATCCATCCA
TCAAGATGGGGAAGAAGAGCAAGAACGGCGGCGGAGGAGGAGGCGAGAAGAAGGCGACGA
CGACGGAGGTGGTGCTGACGGTGGCCATGCACTGCAAATGCAATGGCTGCAAGGACAAGA
TCCGTAATGGCGTCAAGGAACTCGCCCTCGTCCCAGGGGTGGAGGCGGTGGACAAGTCGG
CGGTGGAAAGCAAAGGGGAGGTGAGGCTGGTGGTGGCGGCCGCGACGGCGAAGCCCGAGA
AGCTCAAGGACCGCCTCCACAGGGTCACCGGCAAGAAAGTCGACCTCCTCGTCATCGCGC
CGCCCAAGCCTGCCGCCGCCGCCGACGACGACGACAAGGCCGCCGCCGCCGAAGCGGTTG
CCGCGCTGATCAGGCAGGCGCAGGCGCAGGCGGGCGTCCACGTCGTCCCGGGCGCGTGGG
CGGGCGGCGGCGCGGTGGCGTACCCGGCGTGGGGAATGCAGCAGCCGGAGGGCGGGTACT
ACTACTCGCCGTCGACTTACCCTGCAGGCGGCTTGGTCTACCCCTACGCGGCGGCGTATC
CACCTCCCGGTCAGCAGCTGCTCGGCAATGGCGGCGGCGTGGTGTCGCCATGGTACACTC
ATGGCTACTAGCTTAGTAGTACATTAATTCGTAGTATTAGCGATGTTTGTTTTGTAATTA
GTGATACAGTACGAGCTAGTACTTGTATCCAGATGAGTATCAGTAGTGGATCGAGCAGGA
GAGTACTCCAGTTAGTAATGGTGGTTGTCATCTATAGTTAATTTTGGTGGGGTGATGAGG
CTCATGTGTGTGCACATGTAGTGGTGGTTATAACAAGTGTGTTAAATCTCTGTCTCATCG
GAACTGATGGTATTATACGTAGAATCGCGATCGTATTCGGCTGGCAGTTGCCACCTTCCC
CCTGTTTGAAATCATCATCATACAATGTGCTAGTATGCTATACGACGAAGCAAAAAAGGC
TTTTGGATTCGGTTC